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Simple sequence repeat (SSR)
>UN52078
GGGAGAAATAACAAAAAAAAGAGAAGAAGAAGAGAGTCTGATTCTCAGAGACCTTCTTCTTCTTCCTCGTCGAATCAGTTTCTCGTCTCTACGG
CGAGAATCTGATACTGCGTAGATTCTCTTCCCCGACGTATATCTATCTATAAAATTCGAGGTTCTGTAGACGTATAATAATAAAATAATAACGA
ATGGCGTCGCTAGCTCTGACTTGTCCTCCCGCCTTTAAGGTTCCGTCGTATCTTGCCTCGACGTCTTCGTCTCTATTCTCCCGCTCCTCGATTT
CCTTCAGCGCCATTGAGTCTCGCTTCCGAATCTGCGTTTCCAATTCCGCGAAATGCAATTTGGCCAAGGCACTGAATGTTGGCAACGGGAACGC
TAGTATTCCAATCATCAATGGGACGACACTTCCTAAATACTTTGATTCTTCTTCTTCTTCTTCTTCCCGGTTGGAGAAACCAGTCAGTAGCAGA
GCCAACACAAAGCTCAAGCTCTTCTCTGGTACCGCAAATCCTGCACTTTCTCAGGAAATTGCTTGGTATATGGGCTTGGAGCTGGGCAAGATTA
GCATCAAGAGGTTTGCTGATGGAGAGGTCTACGTTCAGCTCCAAGAGAGTGTTAGAGGCTGTGATGTCTTCCTGGTCCAGCCTACTTGCACTCC
AACTAATGAGAATCTCATGGAGCTTTTGATCATGGTCGATGCTTGTCGTAGGGCTTCCGCTAAGAAAGTTACTGCTGTTATTCCCTATTTTGGA
TACGCTAGAGCTGATAGAAGACA |
Primers for UN52078 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TGAGTCTCGCTTCCGAATCT |
60.096 |
20 |
GCTCCAAGCCCATATACCAA |
59.923 |
20 |
257 |
296 |
552 |
2 |
GAGTCTCGCTTCCGAATCTG |
60.096 |
20 |
GCTCCAAGCCCATATACCAA |
59.923 |
20 |
256 |
297 |
552 |
3 |
TGAGTCTCGCTTCCGAATCT |
60.096 |
20 |
TCCAAGCCCATATACCAAGC |
59.923 |
20 |
255 |
296 |
550 |
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