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Simple sequence repeat (SSR)
>UN52100
GGAGGATGTTGGGTTTCCGGGTATCAATTCTAACTCAGGTAAGTTCATTAAGAGAGACAGAGACGTCGAAGATCAAGAAGAAGAAGAAGAAGAG
GAAGGAAGTGTAGAAGAAGGAGATGGTGAATTTAGGTATGAGAATAAAAGAAGTGTTGGCCTTTTGCAAGCTTGTATGATTCCTGGTGTTATAC
CATTTGCGTTGTGTCTCTTCTTCTCCAAGCTGGTGGCTTACACGTTCTTGTGCTGGTTACCGTTTTATCTCAGCCAAACAACTATTGGTGGAGA
GTATATGTCCGTGACAACAGCAGGAAACCTTTCCACGCTATTTGATGTTGGAGGCATCGTAGGTGGGATTCTTGCTGGCTACATTTCGGATAAA
TTCAAAGCAAGGGCCACGACCGCAGCAACGTTCATGTACGCAGCGATTCCAGCGATGCTCGTGTACCATTCCTATGGGGGTGTCTCTCAGACAG
TCAACGTAGTTCTCATGACGGTTGCTGGTTTGTTTGTGAATGGACCTTATGCACTCATCACAACCGCGGTCTCAGCGGACCTCGGAACGCACAA
GTCTTTGCAAGGGGATTCGAGGGCGCTCGCGACCGTGACTGCGATCATTGATGGGACTGGATCTGCTGGTGCGGCTTTGGGACCTCTTCTGACG
GGGTTTCTTTCGACTTTGGGA |
Primers for UN52100 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GGGTTTCCGGGTATCAATTC |
60.378 |
20 |
CCACCAGCTTGGAGAAGAAG |
59.982 |
20 |
214 |
11 |
224 |
2 |
GGGTTTCCGGGTATCAATTC |
60.378 |
20 |
GCACAAGAACGTGTAAGCCA |
59.911 |
20 |
231 |
11 |
241 |
3 |
GGGTTTCCGGGTATCAATTC |
60.378 |
20 |
AACGTGTAAGCCACCAGCTT |
59.803 |
20 |
224 |
11 |
234 |
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