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Simple sequence repeat (SSR)
>UN52240
GGGAAGAAAGATCACTCAGTCACTCACACACACCTCTGGAGTTTATACGTCTGCCCTCTGTTCCTTTCTCAGTTTTCCTCTTTTGATTACAAAG
CTTCCTTATTTCTTGCTATTAATAGTTTTTTTTTTTTTGTAAGAATTCTTGCTATAAATAGTTGTTGTTGTATCTGTTGCTTTTAAATTTGCTT
ACTGATCAAAACCAGAAAGAAAGTTTGTTTCTTTTTGAGTAATTCAGTTGCTAAATGCAAATCCTGCAGGTTGTTGTTGTTGTTGTTGTTGTTC
TCAGCTTGGTGATAGAATGGGTGCTTCTGGGAGATGGATTAAAGCATTGGTTAGTTTCAATAAGTTAAGGTCTTCTAACAAGGATGATCATGTG
AAGGTTGCAAGCAAGAGCCGGTTTAGGAGAAAACATTCAGTTGATTTAGACGCTGAGAAGCAGCTTCATGAAGATGGATTTGAAGATTCATATG
CGCATAGTGTGATAGACGATACTAAAGTATCTACTTCAACTTCACTACAATCATATAAAGAGCAAAGTAAGGAACATTATGCAGCAACACGCAT
TCAAACAGCTTTTCGAGGCTTTCTGGCTAGAAGGGCTTTACGAGCGTTGAAGGGATTGGTTAGACTTCAAGCCCTTGTTAGAGGACACGCGGTG
AGGAAACAAGCAGCTGCGACGCTTCGGTGCATGCAAGCGTTAGTGAGAGTCCAGGCTCGTGT |
Primers for UN52240 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TACGTCTGCCCTCTGTTCCT |
59.867 |
20 |
TCCCAGAAGCACCCATTCTA |
60.594 |
20 |
269 |
46 |
314 |
| 2 |
TACGTCTGCCCTCTGTTCCT |
59.867 |
20 |
ATCTCCCAGAAGCACCCATT |
60.853 |
20 |
272 |
46 |
317 |
| 3 |
TACGTCTGCCCTCTGTTCCT |
59.867 |
20 |
AATCCATCTCCCAGAAGCAC |
59.094 |
20 |
277 |
46 |
322 |
|
|
