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Simple sequence repeat (SSR)
>UN04887
GGAACACAGCAGCGCAAAAGCAGAGAGGGGACGAAAAAGAAGGTTTCTCTCGAGAGATAAAGCAACGACTCTCTCCCTCTCTCTCTCTCTTTGA
TTTTGAGATTTTGAACTTCCTCTTCCTGATTCAATCTCGAGAAAGGTTAGGCATCGATGCAGAGTCTTCGGTTTTTGGAATTGTGATAAAGAAC
ACACACAAAAAAAGAAAAAACATAATGGGAGGCTGCTGTTGTTGTTCTTCTTCACGAAGAGCTGATGTTGATAATGGACCTCCCTACTATTACT
ATCCGAGAGCAACTGAAGAGCGTGTTCCTTTATCTTCCGCTCTTAACAGGACTTCCTCTACAATCTCCTCTGGTGTTGTTGTAGTTGACACAAA
CTTGGAGACTTCATCTCCTGATGCTTATATACCACCGCCACTCCCTACTCCTTTCGATGTGGCTATAGGTGTTCCTCAAACACCCGAAATCCGT
GAAGAGTCTGCTTGTGTTGATATAAGACAAGTCTCAGTCGAAGCCGCTAATACTGAGTCAGCTCAAGCAACAGTCGATGGTATCACTCTCGATG
GTATCACTCTCGGGGGTAAAGAAATAGAAAGCAAACCACAGGGAGAGATTGACCTTGAAGCTACTGAAGATATAGACCCCAAGAAGCTATCGAA
AGACGTCTTTGTACCAATAGAGGAAGAGGAGGATTGTCCCATATGCTTGGAAGAATATGATATGGATAACCCGAAACTTCTAGCCAAATGTGAG
CACCATTTTCACCTCGCATGCATTCTCGAATGGATGGAGAGAAGTGAAACTTGCCCCGTCTGCAACAAGGAAATGGTGTTTGACTCTCCCCTCG
ACTAGCAACCTGCAAGTACCCCACAGCTTAGAAGACTCGTTTCGGCTCTGAATCCC |
Primers for UN04887 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AGAGGGGACGAAAAAGAAGG |
59.685 |
20 |
CAACAGCAGCCTCCCATTAT |
60.096 |
20 |
206 |
24 |
229 |
2 |
AGAGGGGACGAAAAAGAAGG |
59.685 |
20 |
CAGCAGCCTCCCATTATGTT |
60.096 |
20 |
203 |
24 |
226 |
3 |
GAGGGGACGAAAAAGAAGGT |
59.553 |
20 |
CAACAGCAGCCTCCCATTAT |
60.096 |
20 |
205 |
25 |
229 |
|
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