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Simple sequence repeat (SSR)
>UN52617
GGAATTATTCATCAAAAACAAATCCAAAATCAAACAGAGAGAGAGAGAGAAAGAAAGAAAGAACAGAGAAAAATGGCCGCACCAGCAGAATTGA
TCCCAGCAGGAGAAGTGATCGCTTGCCACACCGTCGCTGACTGGAACGAGAAGTCCAAGGCCGCCAAAGACTCCAACAAACTGATTGTGATTGA
CTTCACAGCAACATGGTGCCCACCTTGCCGTTTCATTGCACCCATCTTCGTCGAGTTGGCTAAGAAGCACCTTGATGTCGTCTTCTTCAAGGTC
GATGTCGATGAATTGAATTCTGTTGCTAAGGATTTCGAAGTTGAGGCCATGCCGACCTTTGTCTACATGAAGGGTGAAGAGAAGGTCGACAAGG
TGGTCGGTGCTGCGAAAGACGAAATCGTAGCCAAGCTTGAGAAGCACTCTCAAGTTGCTTCGGCTTGATTTGGTTTATCGTTCTCTTCATAACT
ATTTGCCTAGTAGTATGTTTGGTGTTTTTAATAAAAATCCTTTGTTGCGTTATTGTCACTTTCACTTGAGTCATCTTTCCCTTTGTGTTGGTTT
GGTGTGGTGCCTCTTGCCTTGGGTGTGTGAATAAATGTTTGCAGACTTTATAACTCGCAGCTATGCTAAATTTTCATGTTATTAACTCTTGAGG
TTATTGTGTTACGTCAGATTTCAGTT |
Primers for UN52617 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CATCAAAAACAAATCCAAAATCAA |
60.089 |
24 |
GGTGCTTCTTAGCCAACTCG |
60.015 |
20 |
250 |
10 |
259 |
2 |
CATCAAAAACAAATCCAAAATCA |
58.881 |
23 |
GGTGCTTCTTAGCCAACTCG |
60.015 |
20 |
250 |
10 |
259 |
3 |
CATCAAAAACAAATCCAAAATCAA |
60.089 |
24 |
GCTTCTTAGCCAACTCGACG |
60.154 |
20 |
247 |
10 |
256 |
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