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Simple sequence repeat (SSR)
>UN52801
GGACCTCCCAAACACAATCCAAAGAAGGTTTTACCCAAATCTCTCCTCTCAAAACCCTAAATCTCTCAGTCATTCCATCTTCTCTCTCGCTTCT
GATCTCGATCTCCTTCTTGACTCTGTGTTGAAGGGTTGCGGTGAAGATGTCTGGAGGTTTAGATATGACACTTGATGAATCTATAAAGAGGGCT
AAGGCTGCAAAATCTGGAGGAAGAGGAACTTCCCGCCGTGGTGGTGGTGGTCGTCGTGATCATGGACCTAATGGGTTTCTTGGTGGTGGTGGTG
GAAGAGGAAACGGACCTGCTCGAAGAGGCCCTCTTGCTGTGAATTCTCGGACCTCATCTTTCACCATTAACAAGCCTGTTCGTAGGACCAGAAG
CGTGCCATGGCAGACTGGTTTGTTTGAAGATGGCCTAAGAGCTGCTGGAGTAGACGTTGAAACCAGGCTCCATATTACCAACCTGGACAGTGGT
GGACGTGGCCGTGGTGGTGGTGGTGGGAGAGGGAATGGGAAGAAGCCAGTGGAGAAATCGGCTGCTGACCTTGACAAGGATCGTGAGAGCTATC
ACGCAGATGCCATGAACACTTCTTAAAAAGCCTTAAAAGAGAATCAGTGTTTGTTTGTTACTAC |
Primers for UN52801 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCGTCGTGATCATGGACCTA |
60.072 |
20 |
CTTCTTCCCATTCCCTCTCC |
60.008 |
20 |
277 |
239 |
515 |
| 2 |
GCTAAGGCTGCAAAATCTGG |
59.982 |
20 |
ATGGTGAAAGATGAGGTCCG |
59.927 |
20 |
164 |
186 |
349 |
| 3 |
GGCTAAGGCTGCAAAATCTG |
59.982 |
20 |
ATGGTGAAAGATGAGGTCCG |
59.927 |
20 |
165 |
185 |
349 |
|
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