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Simple sequence repeat (SSR)
>UN52842
GGTTTCATAGATGGAGAAGAGCATCATCATCACATTAAGCAAAAGAGCGGTTCTTCTTCGCTAAGCAACCACTCCTCAGGTAGTAGCAACAACA
TCCTCAAAGGAAGGAAACTTCCTCCTCGAGTTCAAATCAATTCACCAACGATATCAGACATTGTCAAAGAGAGACGACACTCCGACAACAACAA
CAACAATCGTATGAATAACGATGCAGCATCAGCTCGTTCGCTCGCGAGAAGCGTCATGGAAAGACTCTCTCACACTCACACTCACGGCAAGTCA
AAGTCAAAGGCCTTGAGTTACGGCTCGCATGAGTTGGATGTTTTCGCTAATCTTCTCCCACTTGCTGAACACATAAACAATGGTTATTACTACA
AGGATGACCACGTGGAGGAGGATGAGGAGGTGTTCTCGCACGGTAAGAACAGTACTGAGCTAGAGAAGAAGTACAAAGAAGCTGAGAAGAGAGC
GAAGCTGCTTTCTCAAGAACTAAACGAGCAGAAGTGTGTTGACTTCGACGATGTTAGACAAATCGAAGAGGAGAGAGTAGGACTAGCTTTCGAA
GTCTTGAGCCTCTTGAGGTCACAGATAGACGAGAGAGCTTCTTCCAAGGAAGAGATCAAACGCCTAAAGACCGACTCAGAGCTGCATATAAAGA
GACTAGAGAAAGAGAAGAGCGAGTTAGAGTTCGGTCTTGAGAAAGAGCTCGATAGAACGTCGATAGAGTGGAGTTCAAAGCTAGAGAACTTTCA
GACAGAGAGAGAGCTGAGAGAGCGGGTCAGAGAGCTAGCGAGCACACGTCTCGCTCAGAGAAAAGTAGCGACG |
Primers for UN52842 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTCGCTAAGCAACCACTCCT |
60.015 |
20 |
TGACTTTGACTTGCCGTGAG |
60.025 |
20 |
232 |
57 |
288 |
| 2 |
CTTCGCTAAGCAACCACTCC |
60.015 |
20 |
TGACTTTGACTTGCCGTGAG |
60.025 |
20 |
233 |
56 |
288 |
| 3 |
TTCGCTAAGCAACCACTCCT |
60.015 |
20 |
CTTGCCGTGAGTGTGAGTGT |
59.94 |
20 |
223 |
57 |
279 |
|
|
