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Simple sequence repeat (SSR)
>UN52942
GGCCGATTTCACGAACCGAAACCCTAAATTTCTCGGGACACTACCTCCTTTCCTCTTCTTCACCGGGAGGGATTTAATCGGAGCCGAGTCTAGG
GCTTTTCATTTCGGGTATAACTAGAGCGTGGAGTGAGAAAGCCTAAAAGCAATGGAATCAGATCAGGGAAAGCTCTTTATCGGCGGCATTTCAT
GGGAAACCGACGAGAACCTTCTGAGAGAGTACTTCAGCAATTTCGGAGAGGTTTCACAGGTGACTGTGATGCGAGACAAAGCTACAGGTCGTCC
CATAGGATTCGGATTCGTCGCGTTCTCCGATCCCGCCGTTATCGATAGAGTTCTTCAGGACAAGCACCATATCGACAATAGAGATGTTGATGTG
AAGAGAGCAATGTCTAGAGACGAGCAGAGTCCTGCAGGGAGGCAAGGGAGTTTTAATGGTAATAGGAGTTTTGATAGTGGTGGTGGTGGTGGTG
TTAACGTTAGGACCAAGAAGATATTTGTTGGTGGTTTGCCTCCTGCTTTAACGTCGGATGAGTTTAGAGCTTACTTCGAGACTTACGGCCCTGT
GAGCGATGCGGTGATTATGATTGACCAGGCCACACAACGTCCTAGAGGGTTTGGGTTTGTTTCGTTCGACTCTGAAGATTCGGTTGACCTTGTT
TTGCACAAGACTTTCCATGATTTGAGTGGTAAACAAGTGGAAGTTAAAAGAGCTCTTCCTAAAGACGCTAATCCTGGAGGAGCT |
Primers for UN52942 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AGGGAGGCAAGGGAGTTTTA |
60.068 |
20 |
TGTGGCCTGGTCAATCATAA |
59.924 |
20 |
187 |
412 |
598 |
2 |
AGGGAGGCAAGGGAGTTTTA |
60.068 |
20 |
CAATCATAATCACCGCATCG |
59.914 |
20 |
176 |
412 |
587 |
3 |
AGGGAGGCAAGGGAGTTTTA |
60.068 |
20 |
CGTTAAAGCAGGAGGCAAAC |
59.883 |
20 |
112 |
412 |
523 |
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