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Simple sequence repeat (SSR)
>UN53189
GAGACGAAAACGTGTTTTGTTTTTTTAATGAAACACTTGTTCTTCTGTTCCTCATCTTTATAAACGAAAATCTACAAAGGAAGAGAGAAAAAGA
GAGGGCAGATAGATATAGACGCTTCTTCTTTTAAAAACAGAACATGTGCTTCCTCTTCTTCTTCTTCTGGGACTGAGCAAACTCTTGACGATCA
ATGTAAGCGAGTAATTCTTCTTGCCTCATCAAAGCTTCATACAGAGCCTTTTTCGTGGCTATGAGCTCGGCTTCAAGTGCGTCTACACGGCAAG
CAGCTGCGTTAAGCAGTTCTTCTTTCTCGGAAGGCATCTCATTCGGCTTTGCCTGCAGCGCTCCTATTTTCTCCTCAAGTTCCGTTAATTTCTT
CAGCACTGAATTGAGGAGCTCAGCTTCCTCCTCTCTAGCGGCAGTGTTCCCTTCTATTCCCGGTGGAGGAGGAGGAGGAAGCTGCTTGGTCACA
ACACGGTCTGATAGTGTGCGGAAGAATGTGAGAATCGCCATCACAATCGCCATGATAAATACAAAGACACGAGCACTGAAGCTCTCATGCTCCT
TTGGTTCATTTGGAGTAACAAGAACTCCTTTGGATTGAACCCTGTTGATGGTG |
Primers for UN53189 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GGAAGAGAGAAAAAGAGAGGGC |
59.968 |
22 |
TGCCTTCCGAGAAAGAAGAA |
60.066 |
20 |
240 |
79 |
318 |
| 2 |
GGAAGAGAGAAAAAGAGAGGGC |
59.968 |
22 |
GCTCATAGCCACGAAAAAGG |
59.845 |
20 |
176 |
79 |
254 |
| 3 |
GGAAGAGAGAAAAAGAGAGGGC |
59.968 |
22 |
CATAGCCACGAAAAAGGCTC |
59.845 |
20 |
173 |
79 |
251 |
|
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