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Simple sequence repeat (SSR)
>UN53466
GGGCCAAAACTAGTTTATACATAAATTAAAAATCACAGCACAAAGGCAAAATCCCTTTTACAATACCATAGTCCAGCATAGTCTTCTTCTAACT
CGTAAACTCCAGGTGTACTACACAACACAAGGATCAAGAAACACACACACTAAGACCTTTGACGATTTATTGTTCAATTTCTCCTTCCACTGCT
TCTGCTTCCGCAGTATCAGTTGCCACTTCTTTGTCGTTTCCCTCTCCCTCTTCCAGTACATCATCCATTGTCATTTCATCCTCGCCACCGTTGA
TATCCTCTACTTCATCTTCTTCCTCTTCATCTCCTCCTCCTCCTCCTCCAGGTATCTTCCTCTTCTTTGGCCCGTGCTCCATTATATGCGTCTC
TAGTTCCTTATCCATTGTTTCCTGTAAATTCATATCCCCGTTGTTTGCTTTCCTCGCCTTCCTTGCGTTTTCCCACTTTTCCAGCTCTTTCTCC
ACGTTACCCAGATATCGCTCTTCTATCTCCTTTTGATACTCGCTCACGTCTTGTCTCCTTGCCGCTTTCCATTCTAAGAATGTCTGCTCTTTGC
GTTGCTCTGCCTCAGTTGTATCTTCTTCCAAAGGCCTTGTTGGTGCATAGTATATCTGTGGCTCTGCTTTAGTCCTGAAACAGCCGTCCACATG
TAATCAAAAAAGATTATTAACAGAAACCTATAAATCAACTCGCAATTTCTACCTATGGCCTTGCCCCATCAACATTTGTATGCACGTGAATGGA
AACTTATCCTTGCTTCTATTAAATTGTGAATATGCACACTTT |
Primers for UN53466 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TGCTTCCGCAGTATCAGTTG |
60.011 |
20 |
GAAAGCAAACAACGGGGATA |
59.938 |
20 |
238 |
191 |
428 |
2 |
ATTGTCATTTCATCCTCGCC |
59.9 |
20 |
ACGTGGAGAAAGAGCTGGAA |
59.989 |
20 |
220 |
255 |
474 |
3 |
ATTGTCATTTCATCCTCGCC |
59.9 |
20 |
AACGTGGAGAAAGAGCTGGA |
59.989 |
20 |
221 |
255 |
475 |
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