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Simple sequence repeat (SSR)
>UN04961
GGATTCATTTCATCCGTTTCTTTTCTTCTTTTATTCTTTCTTCATCTTCCCTTAAACTACATTCTTTTTTCTACCATTTTTCAAATCATCAGAT
GTGTTTCTGTACGTTTCAAGAAATCCATCTCCTTCTCAAGATTCTCAATCGCAGTTAATTGGCTCCTGCCGATTCCTTGTTTCCTTTTTGCAGA
ACCAAGCAAAAGTTGGATACTTTTTAACGGTTAAGCAATTGAGAAGATGTTGGGAGGCAACAATGACAGCAACCCTTTACCGCAGGGTAGCCAG
TTTCACTACCAATCAAACACTTCCCTGAATCAGCCTCACTTGCTTGGAACCATGAACGCTGGTTGCACTATTGATCCTGTAAACTACTTTGCTA
ATGATAACCGTGCTCCAATGATTCCGAAACGCGCTAGGGAAACCGAGATCATCAATGGCATGCAGAGACGGCAGAAGCTGCAGATCTCTTTGGA
CTATAACCACAACAACAATAACAACAATAGTGTTGTTGTTCAAAATGAAGTCACAAAGCATAACTTAGTGTCAACTGGTCTGAGACTATCTTAT
GACGACGATGAGCGAAACTCTTCTGTAACTTCTGCAAATGGAAACATCACAACTCCAATGTTTCAGTCACTCGGTGACGGTATCAGATTGGACT
TTGATAGACAGAAAGAGGAGCTTGATCAGTTTATCAAATTCCAGGGGGACCAACTAGCTAAGGGTGTGAGAGATATAAAACAGAGACATGTCAC
GTCTTTTGTCACGGCCATAGAGAAGGAGGTTAGCAAGAAGCTTGAAGAGAAAGACCAGGAGATCAAAAACATGAACAAGAAGAACCGAGAACTC
GTGGAGAAGATAAAACAAGTGGCGGTGGAATCTCAGAACTGGCATTACAGGGCAAAGTACAATGAATCTGTGGTTAATGCCTTGAAGGTAAATT
TGCAACAAGTGATGATGTCACATGGAAACAACATCAATGCAAGTGGTGTATTAGCTGATCATCATCATCATCACCAAGTGAAAGAAGGGTTCGG
GGATAGCGAGATTGGTGACGAAGCAGCTTCGTACAACCACATGAACATCCCGCGGGTGCCAAACACTGGGATGAGATGCAAGTCGTGTAAGGTA
AAGGAGGTTTCTGTGTTGCTTGTACCGTGTAGGCACTTGAGTTTGTGTAAAGACTGTGATGCGTTCACTGGTGTTTGTCCTGTTTGTCAGTCTT
TGAAAACTTCTAGCGTTCAAGTCTTTTTCTCATGAGAAGAATCCATG |
Primers for UN04961 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CTGGCATTACAGGGCAAAGT |
60.132 |
20 |
AGCTGCTTCGTCACCAATCT |
60.02 |
20 |
178 |
885 |
1062 |
| 2 |
ACTGGCATTACAGGGCAAAG |
60.132 |
20 |
AGCTGCTTCGTCACCAATCT |
60.02 |
20 |
179 |
884 |
1062 |
| 3 |
AAGAACCGAGAACTCGTGGA |
59.844 |
20 |
AGCTGCTTCGTCACCAATCT |
60.02 |
20 |
231 |
832 |
1062 |
|
|
