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Simple sequence repeat (SSR)
>UN53480
AAAAAGCTTTAATTTCAAAACAAACACAAAAATTACAACAAGGAACAAAAGGGGGGTTTCAAGAAAAAACCAAAAACAAAAATAAAAAGCAAAA
AGCTTCTTCAAAGGATATGATTCAAATTATACAAAAACTACCCCTAAAAAAAGCTCTCTAACCACCATTACAACACATGTATTCATTCATTCAT
TCATTCAATCTCCCCAATTCACTACCCCCTAAACCCCCAATCTTCTTTCACTTCTTCACCTTCCTTGTTGAAACCCTCTTCCCCGGAAACTTTA
CAGCCTTCCCCTTCCCGCTCTTAGCCGGAGCCTTGGCCTTTGCCTTCTTAATTACAGCCGCGGCGGCTTTCTTAACAGGAGGAGCAGCCTTCTT
CTTCCCTGGAAAAGTTCTAGTCAAAGTCCTCCCCGCTTTAACAGGTCTCTCTTTAGCCTTAGGCTTAACAGCAGCAGCAACAGCTTTAGTCTTG
GACACAGCAGCCACTGTCTTCGTCTTCGGTTTAGGTTTAACAGCGACTACTTTAGCCGCCTTGGGCTTCACAGCTACAGCAGCTTTGGTCTTCT
TGGATCCTTTCCCCGCCGGTTT |
Primers for UN53480 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ACAACAAGGAACAAAAGGGG |
58.931 |
20 |
GGGGTTTAGGGGGTAGTGAA |
60.046 |
20 |
191 |
35 |
225 |
2 |
ACAACAAGGAACAAAAGGGG |
58.931 |
20 |
TAAAGTTTCCGGGGAAGAGG |
60.415 |
20 |
248 |
35 |
282 |
3 |
ACAACAAGGAACAAAAGGGG |
58.931 |
20 |
AAGGCTGTAAAGTTTCCGGG |
60.474 |
20 |
255 |
35 |
289 |
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