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Simple sequence repeat (SSR)
>UN53700
GTAGATTGATAAAAACACCACTTAAATAGTTCTTTTTTTTTTTATATATATAGTTGAAGCAAATAGTTTCAATCTTTTGAGTTCAATCAAGAAT
CTAAAATCCCAACAATTTCTTCAGAGAGCGAGAGACTCTCTCGTTAAGCCTCTCTCCACCTTTCACTGGCTATTAAACTCTTCATAGTAATCAT
CACTTATAACCGCCACAAACCTCTCAAGCCAAGGAAGCTGGTGAAGATCTTTCATGGCTGCTTCAACATACGACGACTCTGTAGTACATGGAGG
AGGAGGAGGAGGTGGTGGCGACTGATAAGTATGGTGATCACTGAGACTGAACCCTCCACCCGCCAAGAACCGTTGGATCAGAGCAAGCTGAGAT
CTTTCTTGCTCAGAGTAAGCGTCCATTACCGTTGGAATTGAGCTGAATGTGTCCCAAGGCCATTGCTCAAGTTCTTGGATTGTTCTCAGACTCT
GAGTTATCTTCATCTTCTTCCTCATCGTCCCAAAAAGCGCATGTGCAAGTCTGTTGCCCTTCTCTGTACTCTGCTCCACAACAGTAGCAAAACT
CATGCCCACATCGACAAGTCATGTGGTTACAGCCTTGAGCAAGCTCGATCATTATACGGCATTGCTGACACCGTTTCCACCTCTTATACCTAGC
CAAGCGATGCAACGTAATATCATCTGGATATCTTTCATCAACCGGAAGAATCTGAAACTCTTCACAGCTCATAGAATCGTGCCAAGGAACACCA
CAGTCCACACACAAACCTCTCGCATAGTGGACACTTTCACACAACATATATTC |
Primers for UN53700 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CTTTCATGGCTGCTTCAACA |
59.988 |
20 |
CTTTTTGGGACGATGAGGAA |
60.044 |
20 |
271 |
237 |
507 |
2 |
GCTGCTTCAACATACGACGA |
60.019 |
20 |
CTTTTTGGGACGATGAGGAA |
60.044 |
20 |
263 |
245 |
507 |
3 |
GCTGCTTCAACATACGACGA |
60.019 |
20 |
TTTTTGGGACGATGAGGAAG |
60.044 |
20 |
262 |
245 |
506 |
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