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Simple sequence repeat (SSR)
>UN04976
GATACTTAAGCTTGTGATAGAGTTACAATTAGGTGGTTGAGAAGATAAACTTGTTGATGAAGAAAAAAAGGGACTGTCTTTTTTTTTTAAATGT
CAGACAGCGCATGAAACCTCATTACAACCAAGTAAATTCATATATCCAAATGGATTAGCGTTTGGTTCGACCGAGTGTTGTTCTCAGAGTCTCC
CAACAATGTCGGAACCTTTGACTCATCGACATCAACCCTAAAACTGTGGTTTTTAGCAACTGTACAAAGAGGGCATGCACCTGCGCTACGAGCA
TACACGTGCTCTTCTCCTGCTTCCCTCTTCTTCTGAAGCTACCAACGACAAGGAGGATGTCACTTCTCTTTCTGATAAGCATCTCTTGTATGGT
CTGAACCCATTTACAGGATAACAGGGTTCTGCGCTCTTCTCCAAGTTCCCCGAAACTTTGGTGACCGAGCCATATGCATTAGAACCGGTACAGG
ACGTTTCCCATACCCCTAGAGATAAAACAGTATCTACATGACTAGAATCTTGACCCGTCATTGATTTATGATTAGCACCGCCCTCTCTGGAAGA
AGATGTTTTGTTAGATCCTCCTGCAACTAGCACAATCTTCCCAAAAAGCATAATGCTAGAGATGGGTGTTGAACCGGTTACAGCACCATCCTCT
TTAAAAGATTGATTGGATACTGCGTAGTCATTCTTCTTATCAATGGACTGGATGTCAGTGGTACATGAGTTAGGAGAGGAGCATCGATTGACCA
CATCCTCTGTAGCAAACGCTGATAGCACAGAAGTTGGAGACTTTGTTTCTTTCTCCATAGCTGAGGAAGGAGACCGAGAGTATGGAACAGGCGA
TTTTCGAGGATAAGGATGCGTCGGTTTCCTCTTTGGACGAGGAGGAGGGATCATAATCGAGCCGTCACTACCACTGTCAGCTTCACGAGCCACC
TTGGAGAAAAACTTTTGAGCATGGCTTCTGATCTGAATAGCTGTTTTCGTACCTATATGTTCTTGGATTTGACGCCAAGCACGACCGTAAAGCT
GTATAGCTTCAATGAACCTCTCATGCTCTTCCTCACTCCACTTCTCTCTCTGCTTAGATACTGTATACGGCTTTCTAACCTTAGAGAACAACAC
ACATACAAAGTTCAGACAATTGAAAAAAAAGAAAGAAAGAAAGAAAGAAACTTTCTCCCACGATGGAACTTGTCTTAACAAATTATAGCTGATA
TACCTTAGCAGCGTTTGCGATCCGATCACTACTGGTTTCATGATTGGTTCCTTCATTTGAATTGCAACTTCCATTCTCTACATTGCTAATTACA
TCCTCACTTCGATCCGGAGCAGCCATGTAACGGTATCTAATAAGCTTTCTTCAGATCTCAGGACAGTGAATAGAAAAAAGTGGAGAGTAATTCC
TGCTATTTTCACGAGAAATCAGACCGATTATCTCTGAGAAAGTGAAGCAG |
Primers for UN04976 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ATGTTCTTGGATTTGACGCC |
59.939 |
20 |
AAGACAAGTTCCATCGTGGG |
59.966 |
20 |
208 |
997 |
1204 |
2 |
ATGTTCTTGGATTTGACGCC |
59.939 |
20 |
CGCAAACGCTGCTAAGGTAT |
60.417 |
20 |
245 |
997 |
1241 |
3 |
ATGTTCTTGGATTTGACGCC |
59.939 |
20 |
AAGTTCCATCGTGGGAGAAA |
59.526 |
20 |
203 |
997 |
1199 |
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