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Simple sequence repeat (SSR)
>UN53845
CGCTCTCCACTTTTATCTCAATTATTAACAAAGAAAAAAAAACCCTAATTTCGATTCAATTCGCGATCGGACCCCTATCGCAATCGACGGAGAG
AGAGAGATTAGAGACGGAGGCGATGGATTTCGATTCCAACGGAGGACCCGGGTTCAACAACGGGAATAGTAATAACAACAACACGTGGGGGAGG
TTCGGTGGGAACAGGACGGTTTTGACGAAGACTGAGAAGGTTTGCAGGTATTGGGTGGATGGGAGCTGTAGCCACGGCGACAAGTGTAGGTTCT
TGCATTGCTGGAGCAAAGGAGAGGGGTTCGCGTTGCTGACTCAGCTCGATGGGCATGAGAAGCTTGTGAGTGGGATCGCTTTGCCTGCTGGATC
TGATAAGCTTTACACTGGGAGTAAAGATGGGACTATTCGTGTCTGGGACTGTGCTTTTGGACAGTGTACAAGCGTACTCAATCTAGGTGCGGAA
GTTGGGTGTGTGATTAGTGAAGGCCCTTGGCTATTGGCTGGCATGCCAAATCTTGTCAAGGCTTGGAATATGGAAGCGAATGTAGACCAGAGTC
TGAGTGGACCTGTTGGCCAAGTGTATTCTCTTGTTGTGGGTACTGATCTACTCTTTGCTGGCACACAGGATGGTTCTATATTGGCATGG |
Primers for UN53845 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCTAATTTCGATTCAATTCGC |
58.707 |
21 |
CACCCAATACCTGCAAACCT |
59.853 |
20 |
202 |
44 |
245 |
| 2 |
CCTAATTTCGATTCAATTCGC |
58.707 |
21 |
CTTCGTCAAAACCGTCCTGT |
60.149 |
20 |
175 |
44 |
218 |
| 3 |
CCTAATTTCGATTCAATTCGC |
58.707 |
21 |
GAACCTACACTTGTCGCCGT |
60.179 |
20 |
238 |
44 |
281 |
|
|
