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Simple sequence repeat (SSR)
>UN54053
GGGACTCACTCAAATCCACAATCTCCAAAAACATCCGAGATCTCCCTTCTCCCTTTGTGTGCGCTCCGTTCAGTTAGACATGGCCACCACCGCA
TCTCCAGCTCCGACGAAGAAATCGAGAAACAGCAGAAAGGCGTTGAAGCAGAAGAACGAGATCGTGACGGCGGACACTCCGTCTCCGCCGTCGC
CTGTCTCCGTCGCCAAGGGGAAGGGGAAGAAGTCGTTCGAGAAAGATCTGCTGGAGATGCAGGCGATGCTGGAGAAGATGACGATCGAGAAGGA
TAAGACGGAGGAGTTGCTTAAGGAGAAGGAGGAGATTCTGAGGAAGAAGGAGGAGGAGCTCGTGACGAGAGACGCTGAGCAGGAGAGGCTCAAG
ACGGAGCTGAAGAAGCTTCAGAAGATGAAGGAGTTCAAACCTAACATGACGTTTGCTTGTGGCCAGTCTCCCACACAAGGTGAGGAAGAAAAGG
TGAACAAGAAGAAGAAGAAGAAGGATTGTCCCGAGAGGAAGCGACCATCGTCGTCATACATTCTGTGGTGTAAGGAGCAGAGGGATGAAATCAA
GAAGGAGAATCCTGAAGCTGACTTTAAGGAGACTTCGAACATTCTTGGCGCTAAATGGAAGTCTCTTAGCGCGGAAGAGAAGAAGCCTTACGAG
GAGAGGTACAAGGTGGAGAAAGAAGCTTACCTCCAGGTGGTTGCTAAGGAGAAGCGTGAGAGAGAGGCGATGAAGCTTCTTGATGATGAGCAGA
AGCAGAAGACTGCTATGGATTTGCTAAATCAGTATCTTCAGTTTGTGC |
Primers for UN54053 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AGAGACGCTGAGCAGGAGAG |
60.033 |
20 |
CCATTTAGCGCCAAGAATGT |
60.096 |
20 |
273 |
350 |
622 |
2 |
CAGTCTCCCACACAAGGTGA |
59.705 |
20 |
ACGCTTCTCCTTAGCAACCA |
60.015 |
20 |
276 |
440 |
715 |
3 |
CAGTCTCCCACACAAGGTGA |
59.705 |
20 |
CACGCTTCTCCTTAGCAACC |
60.015 |
20 |
277 |
440 |
716 |
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