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Simple sequence repeat (SSR)
>UN54157
AGGGAAAGAGCAAAAGAATAAAAGAGAGAGAGACATTAATCGAGAATCACTTGTCTGTTTGTTTCGTCGAATCGCAAGCTCGAAGAAGGAATCA
CGAGTCGAAGAAGTTTCGATTTTTCAGATCTGAATCCGTTAAGAGAGAGAGAGAGAGAGAGAATAATGGGCAGTCGAGGCGGCGGCGGCGTAAG
TAACGCGAAGGCGGGTGGTGTTCCAGCGTCGTGTAGGAAGGTGGTTGAGAGTTTGAAAGAGATCGTGAGCTGTTCTGAGTTGGAGATCTACGCG
ATGCTTGTCGATTGCGATATGGATCCTGACGAGACCGTTAGTCGTCTTCTTTCTCAAGATACTTTTCACGAGGTGAAGAGCAGACGAGACAAGA
AGAAAGAGACCAGCAAAGATCCAGGAGAGTCTTGGACACGTAGCACACCCAATCGCGGTGCTAGAAGCAGCGGTCATGGTGGTGGAAACAGATT
TAAATCCAATGAGAGGGGAAGTGTTCAAAGTGTACCTGCAAACAGAAGAGAGAACGGAACACGTAACCATTGGGCTGGCTCTTCTTCAACACCT
GGTGTCCTTGGGCGCCAACCTCCACCCAACAGCGATCCTACTAACGCTGAAGTTAAGAAAGCACAACCAACGGGCACAAGTGATGCAGTTACTT
CCTCTTCGCTGCCGACTCCTCCTGTGTATCAATCCGCTTGGGCCAATGCTAACCCAGGTCAGAGAACAATGGCTGAGATTGTGAAGATGGGTAG
GCCTCTTCTTCATCAGAAGAAGAACGTTGTTGCTGTGCCTCGTTCAACAGAGCTCAAGAGAGTGGAAGCAAAGCTCCGTT |
Primers for UN54157 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GAATCGCAAGCTCGAAGAAG |
60.235 |
20 |
AACCACCTTCCTACACGACG |
60.028 |
20 |
166 |
69 |
234 |
2 |
GAATCGCAAGCTCGAAGAAG |
60.235 |
20 |
TATCGCAATCGACAAGCATC |
59.799 |
20 |
233 |
69 |
301 |
3 |
AGCTCGAAGAAGGAATCACG |
59.574 |
20 |
AACCACCTTCCTACACGACG |
60.028 |
20 |
158 |
77 |
234 |
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