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Simple sequence repeat (SSR)
>UN54162
GGAAGGAAGGATAGAGAGAGAGAGAGGGAGAAAATAAAAGCTGCAAGGCTCTCTTTTTCTTTCTCTCGTCATCCCCTGCAAATAGGAAGGTTGG
AGAACAAGAAGTGGGGTCTCTGTTTTCATTATCAGCCTTGCGATTCCGATAAATCTATCAGCTTCAAGGCCCATTCAGTCCAATCCAATCCAAA
TCCGCTTCTTCTTCACTCAATATAATATATAGTTAGAGAGAGAAAGAGTTAAACTTTTCACATCTCTCTCTCTCTCTATCTATCAGCTTCTCTC
CTCCTGTTCTCATGGAAGCCTCACCCAATGATCGACTTCATTTTGGCAAGATGGGTTTCGGGTGTCAGTATTACAGGAGGAGATGCCAGATCAG
AGCACCTTGTTGCAACGAAGTCTTCGATTGTCGCCATTGCCATAACGAGTTCACTAGCACTCTGCGCAATATTTACGACCGTCATGAGCTTGTT
CGTCAAGACTTTAAACAAGTACGATTGGGTTCTCTTAATTGAGTTATGTGATCTCAGCAAGTTCAACTCTTTTTAATTTGTTGCATCTTATGGT
TTGTTTTTTCAGGTGATTTGTTCTGTTTGCGATACAGAGCAACCGGTAACTCTCATCTTTTAACTATTCTCAATGAGTTGTGAATATCACTCAC
GTATCAGTTACTTGTTTCAATGTTTT |
Primers for UN54162 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TTGGAGAACAAGAAGTGGGG |
60.081 |
20 |
TGAAGTCGATCATTGGGTGA |
60.048 |
20 |
232 |
91 |
322 |
2 |
GTCATCCCCTGCAAATAGGA |
59.894 |
20 |
TGAAGTCGATCATTGGGTGA |
60.048 |
20 |
255 |
68 |
322 |
3 |
TTGGAGAACAAGAAGTGGGG |
60.081 |
20 |
AAGTCGATCATTGGGTGAGG |
59.927 |
20 |
230 |
91 |
320 |
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