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Simple sequence repeat (SSR)
>UN54172
GGATAATTTAAGTTGACTACATTTACAGGGGATCGGGAACGGCATCCCACTTGGAGCGGTGGTGACAACACCGGAGATCGCCGGCGTTCTAAGC
CGACGGTGTTATTTTAATACTTTTGGTGGAAACCCAATGTGCACTGTCGCGGGACATGCAGTCCTTAGAGTCATTCACCAAGAGAAGCTCCAAG
AGAACGCTTTCCTCGTTGGCTCTCATCTTAAACGTAGACTTACACATCTCAAAGACAAGTACGAAATCATTGGAGACGTTAGAGGAAGAGGATT
GATGCTAGGAGTTGAGTTTGTCACAAACCGCGACTTAAGAACTCCAGCTAAATCAGAGACTCTCCATTTAATGGATCAAATGAAAGAGATGGGA
GTGTTGGTGGGTAAAGGTGGGTTCTACGGAAACGTTTTCAGAATCACTCCTCCTCTCTGCTTCACCATGTCAGACTCTGATTTCCTTGTGGATG
TGATGGATCACGCATTGTCCAAGATGTGATTTACTCTCATTTTGTGATATCTTTCATGATGCTTCACCTTTTGCGTAGTTGTGTGTGTGTGTAT
ATATAAACGACACATTACAAAAAGTGAAATTATAACCTTCCTGTTGCTTTTTAGTATCCAGATGTATCACGGAACATCTATAAATAATAAAGTC
TCGCTGTTTTGTTTCTC |
Primers for UN54172 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AGAGATGGGAGTGTTGGTGG |
59.962 |
20 |
GATGTTCCGTGATACATCTGG |
57.878 |
21 |
276 |
367 |
642 |
2 |
ATGGGAGTGTTGGTGGGTAA |
60.088 |
20 |
GATGTTCCGTGATACATCTGG |
57.878 |
21 |
272 |
371 |
642 |
3 |
GGTGGGTAAAGGTGGGTTCT |
60.088 |
20 |
GATGTTCCGTGATACATCTGG |
57.878 |
21 |
261 |
382 |
642 |
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