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Simple sequence repeat (SSR)
>UN05040
TTTTTTTGCTATCGTCGTCAAGAGCCAGAGAGAGAGAGAGAGGAATCGGTTGTGTGTTGTCGAAGCTTCTTGGCTCCCTCTTCTCTTGTTAACG
CGCTTATCTCATCTGCGATCTCTCGTTGATCAGAGGATTTCCCGAGCTTCAGAGATCAACAATCATGGCCACCGCTGGAGGAAACAAGAACATC
AACGCCAAATTGGTATTGCTTGGGGATGTTGGAGCTGGAAAATCTAGTCTTGTGCTTCGATTCGTCAAAGATCAGTTTGTTGAATTCCAGGAAT
CACCGATAGGTGCAGCCTTCTTCTCTCAAACATTGGCTGTCAATGATGCAACTGTCAAGTTTGAGATTTGGGATACTGCTGGTCAGGAACGTTA
CCATAGCTTGGCTCCTATGTACTACCGGGGTGCTGCTGCTGCCATTATTGTCTTTGACATCACTAATCAAGCCTCATTTGAGAGGGCTAAGAAA
TGGGTTCAGGAACTTCAGGCACAAGGTAACCCTAATATGGTGATGGCTCTTGCTGGAAAGACATCTTTTACGAAATCGCAAAAAGGCTACCACG
TGTACAGCCAGCAGAAAACCCAGCAGGAATGGTTCTCCCAAGCGGGCCAGCAGCTACTGCAGTGAGTAGTTCATCATGTTGTGCTTAAGAGAGC
TCTCTCTCTTGGTTAGTCACTGTAGAAAGGAAACATCCAGTCAGTGCCGGTCCCAGCATTTTGTGGGCTGGAAGCTAAAATAATATATTGGGCC
TGTTGATTAACACATTTAAGAGATAAATAAGGAAATATTGATTTGGGCAAAGAAATATTCGTAACTCATGACCTGTTCTCAGGGCAGTAGTAAC
CACAACCAACTCAACTAACAGACAACTAAAACAAATCGCGGCCGAAATTCTATTTATTTTTGGTCGGCCGGAAGCAGCTGCTTCCTTTGCTTAC
TTTCAAGGCCGGCTCTGCATCCAGTCTCTTTATGTGTTTTCTTCTTGTCTTAACGTTGTCGCTTTGCTTTGCATTGTATATCAAGATGTTTCCG
CTCTGTGGAAATCTAAAGATACTTGTATTTGAAGAGGTTTGATTTGTAATTAGATATCACAACTTACTATGCGTGTGATCGCTTCTCTAT |
Primers for UN05040 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
| 1 |
TTTTTGCTATCGTCGTCAAGA |
58.57 |
21 |
GTTGATCTCTGAAGCTCGGG |
59.95 |
20 |
152 |
3 |
154 |
| 2 |
TTTTTGCTATCGTCGTCAAGA |
58.57 |
21 |
CAACGAGAGATCGCAGATGA |
60.096 |
20 |
120 |
3 |
122 |
| 3 |
TTTTTGCTATCGTCGTCAAGA |
58.57 |
21 |
TGATCAACGAGAGATCGCAG |
60.096 |
20 |
124 |
3 |
126 |
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