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Simple sequence repeat (SSR)
>UN54262
CAATACGATCTGTGATCTCAGAGATTCCCAGGCGTTTACTCTTTAATGAGTGTAACTATTCTGAAAGGATCACACTGAACATCGAGATACCTGG
ACATGTGTGTTGGCTTGATCTAGTGTGAACGAGAAGCATGACCCTCCATAGATATAGGATGAAAAGAGGAGCGCTTAGGCGGAGGGCTAAAGAT
ATCTCCCTGGTGCTTATTGTGCTTGTTTGTGCAACCCTAGTTTTATGGTCGTGGGATACAACTCCAACCTCGTCCTTTCTTCCACCCGAAAGTC
ACTTTCTTAAGCTGCAACCAGAAGAAAAGTCTGAGAGAATATCTACCGTAACAAACACTGAAACCAAGGATAGCTACTCATCAGCTACTCCGTT
TGTGAACAAAGAGCAAAGTAAAGAGGATCCAACTGATAATAAGGATACCGAAGAAGAAGAAGAAGAAAAAGAAGAGAAACAAGTGGAAGAAGTT
ACTGACAGTGAGACAAACAAAGGGAAGGCATCAACTATTGAAGAAGAAGAGAAACAAGTGGAAGAAGTTAGTGTAAGTGAGCCAAAATTTCAGA
AGACACCAACTAGTAAAGAAAATAAAATAGAAGAGGTGAAACAAGAGGTTACTGCTGGTGAGGCCGATGCAGAGACAACACATATTAAAAAGAC
TAATTCAGATCCAGAGAAGAAAACTCTTACAACAGACCAAGAGAGGACTGTACAGGTGGTAGCCAAGAAAGATGATGATAGTAGTTCAACAGCT
CGCATATCTAA |
Primers for UN54262 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CCGTTTGTGAACAAAGAGCA |
59.881 |
20 |
GCCTCACCAGCAGTAACCTC |
59.874 |
20 |
257 |
372 |
628 |
2 |
TTCTTCCACCCGAAAGTCAC |
60.088 |
20 |
TGCCTTCCCTTTGTTTGTCT |
59.711 |
20 |
236 |
265 |
500 |
3 |
CCGTTTGTGAACAAAGAGCA |
59.881 |
20 |
TGCCTTCCCTTTGTTTGTCT |
59.711 |
20 |
129 |
372 |
500 |
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