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Simple sequence repeat (SSR)
>UN54315
GGCCTTTTCCTCTTAATTTCTGTTACCAAACCTCCTCTGCTATCAATCAATCATGCTCTTCAATCCATCATTAATGAATTCGTTTCAACTCTTC
TCTTTCTCCTTCTTTATAAACAGCTTCGTATAAACTAGCTTCAAACCCCCCTAATTCCTCCTCTCAAGAAGTTGAAGCGATGGTGATGAACCCA
ACTGCAAATCCCTGACTCAACCGGCAATTCCCCATTCGCTTTGTATTTCTACTTCTCCCCGTCGACACAGTCCCGAAAATCAAATTCTCAGATC
TATTAATAGCAACTCAAACAGCGAAATCAACCGGAAAAGCCCCACGGCTCTCTTCTTCAATGACGTCGTTCCTGGTTTTGGACAGTTTGAGATA
TGGTGACTGTTAATTCATTCTGAGAAGCGAGAAACACAGTTAAAGGAGTTGTGTAAGGGATTGAGTTTGGGATCACTTTTCTTCCAGCGTAGCT
TCTTGGCTCCTGTTGAGGTAATGCAAAGTCTTTGCCTGAAAAGAAGGATCAACAAAAGAGCCATATGAATTTGCTAGGAACATTGTGGGAGTTT
ATGCGACATAGCTTCGGATGAGCTTATTATCTCGTCCACGGATGCCTTTTGTCTCAAGACAAGAAAGCCTTACACCATCACTAAACAAAGAGAG
AAGCGGACAGAAGCAGAGCATGAGAAGTTTGTAGAAGCTTTAAAACTCTGGCAGAGCTTGGAGACGAATCGAATGTGTGTGTGTGTGATTTAGC
TGAATTTAGAGAGTCTTCTGATGCACATTCTAAAATACTACGTTTGAAGAACATATTGGGTTTTATGTTTTAACATTGGGTTATCTTCAGATTG
TGGGTCAGAGAGATGTTCCAAAGCTTAAG |
Primers for UN54315 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ATTATCTCGTCCACGGATGC |
59.923 |
20 |
TGGAACATCTCTCTGACCCA |
59.18 |
20 |
277 |
590 |
866 |
2 |
GCAGAGCTTGGAGACGAATC |
60.104 |
20 |
TGGAACATCTCTCTGACCCA |
59.18 |
20 |
158 |
709 |
866 |
3 |
AGAAGCGGACAGAAGCAGAG |
59.891 |
20 |
TGGAACATCTCTCTGACCCA |
59.18 |
20 |
210 |
657 |
866 |
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