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Simple sequence repeat (SSR)
>UN54352
GGGCCGAACCAACTAACCCTCAGGGGACTCTTAGAAAAAAGAAAAAAAAAGCCTCAAAATCCTCTCTAGTCTTCTTCTAGAAACACCTTCTCTC
TCATTTAGAGTCTTTTCAAAAAAAAAAAAAATGGCGGTTACATCTTCTAGAACCAGATCAACCGGTACTGCGCTACGCTCTTCTTCAGGCTTCG
CTTCCTCCACAACCTCAACCTTCTCGTCCCGTTCTTCAGCTTTCTTCAGCAACCAACAACAACAACAACAACAACCTCACCACAGATCCGCGTC
CCCGACGCGCGTGAACCTCTTCGCATCATCACCGTTAAAACAATCGTTCCGTTACTCGATCGATTCCAGATCTATATCCGACGAACAGTTTGAA
TATGAGAAGATCGGCGATGACGAATTCGCTGGTGAGGATCGGTGGAGTTGAAGGTGAGTGGGTGAGGAGAGCGTTGACGACGTTGATAAGGCCG
TCCTCGCATCAGCAGAAGAGAAGGTCCGCGTATCAGCCTAGGCCTAGTAGGCTATCGACTATGTCGAAAGCAGGAGAAGGTGTTTGATCAGGTT
TTAGGGCTTTGTGTCACTGAATCGGCCTCAGGAGATATCGTTTCTGGTAGAGCTGTGGGAGATAGATCCGGCGAAAGGGAGCTGAGACTCGGGT
CGGGTCTGCGCGTACGGGTTGAATCAGGGAGTTATGTAAACGGTTCCGGAAACGACGCCGTCTTAATTTTGTGTTTTGTTTTGTTGGGTGAAGA
TGAATTGTACATAGTAGTACTTCATTTGCTATTGAAGCGCACTGAA |
Primers for UN54352 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CTTCTCGTCCCGTTCTTCAG |
59.982 |
20 |
GGAATCGATCGAGTAACGGA |
60.036 |
20 |
142 |
208 |
349 |
| 2 |
ACCAGATCAACCGGTACTGC |
59.997 |
20 |
TTTTAACGGTGATGATGCGA |
60.073 |
20 |
177 |
146 |
322 |
| 3 |
ACCAGATCAACCGGTACTGC |
59.997 |
20 |
TTTAACGGTGATGATGCGAA |
60.073 |
20 |
176 |
146 |
321 |
|
|
