BLASTX 7.6.2
Query= UN00055 /QuerySize=682
(681 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297815872|ref|XP_002875819.1| predicted protein [Arabidopsis ... 92 6e-017
gi|297815862|ref|XP_002875814.1| predicted protein [Arabidopsis ... 77 2e-012
gi|15232678|ref|NP_190275.1| putative cullin-like protein 4 [Ara... 76 3e-012
>gi|297815872|ref|XP_002875819.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 457
Score = 92 bits (227), Expect = 6e-017
Identities = 72/198 (36%), Positives = 95/198 (47%), Gaps = 31/198 (15%)
Frame = +1
Query: 124 KRSISEGDLSPSSSKKQKKKKTKHHESED------LESDLAPPPIRCSIS-DGDFIEEEM 282
K +++GD S S KKK K+ ++ D ES LA PP S+ DGD +
Sbjct: 7 KHLMTDGDSSSS------KKKGKYQDAGDPGGYLGFESALANPPHMSSLKIDGDLSSSKQ 60
Query: 283 DTDHDAESTMVNPPPPMRCDDPPPNTS----PAVRVFK-FNFIMNKTDPKVYLDKAWILL 447
D D ++ P N S P +RVFK + K DPK+YLD AW L
Sbjct: 61 KNDEDRSLSL------------PANISMKSTPGLRVFKPIIPDIPKPDPKIYLDDAWTKL 108
Query: 448 KPALASILHEENLDRFYFGTINHASSLCFGNDAGEDLYKLIV*ECGEYISTNLESLAVHC 627
KPA+ +I +E D N + +GE LYKLI+ EC YIS ++SL HC
Sbjct: 109 KPAIRTIFLDEAQDFHCSEIFNAVRKAWWSKSSGETLYKLILEECEIYISAAIQSLESHC 168
Query: 628 SDDDPSLLLLPLEKFWLE 681
DDDPS+ L +E LE
Sbjct: 169 -DDDPSVFLPRIENCCLE 185
>gi|297815862|ref|XP_002875814.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 293
Score = 77 bits (188), Expect = 2e-012
Identities = 49/119 (41%), Positives = 64/119 (53%), Gaps = 6/119 (5%)
Frame = +1
Query: 340 DDPPPN----TSPAVRVFK-FNFIMNKTDPKVYLDKAWILLKPALASILHEENLDRFYFG 504
D+ P N T+P +RVFK + K DPK+YLD AW LKPA+ +I +E D
Sbjct: 16 DNDPANISMKTTPGLRVFKPIIPDIPKRDPKIYLDDAWTKLKPAIRTIFLDEPQDYHCSE 75
Query: 505 TINHASSLCFGNDAGEDLYKLIV*ECGEYISTNLESLAVHCSDDDPSLLLLPLEKFWLE 681
N + +GE LYKLI+ EC YIS ++ HC DDDPS+ L +E LE
Sbjct: 76 IFNAVHKAWWSKSSGETLYKLILEECEIYISAAIQYFESHC-DDDPSVFLPLMENCCLE 133
>gi|15232678|ref|NP_190275.1| putative cullin-like protein 4 [Arabidopsis
thaliana]
Length = 247
Score = 76 bits (186), Expect = 3e-012
Identities = 46/110 (41%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Frame = +1
Query: 358 TSPAVRVFKFNFIMN--KTDPKVYLDKAWILLKPALASILHEENLDRFYFGTINHASSLC 531
T+P +R+FK I + K D ++Y++ AW +LKPA+ +I +E D G N +
Sbjct: 3 TTPGLRIFK-PIIPHTPKPDSRIYVEDAWTMLKPAIRAIFLDEPQDFACSGLFNAVNKSW 61
Query: 532 FGNDAGEDLYKLIV*ECGEYISTNLESLAVHCSDDDPSLLLLPLEKFWLE 681
+GE LYKLI+ EC YIS ++SL C D DPSL L LEK WL+
Sbjct: 62 CEKSSGEALYKLILEECEIYISAAIQSLESQC-DTDPSLFLSLLEKCWLD 110
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,553,473,461
Number of Sequences: 15229318
Number of Extensions: 14553473461
Number of Successful Extensions: 8671999
Number of sequences better than 0.0: 0
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