BLASTX 7.6.2
Query= UN00055 /QuerySize=682
(681 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G46910.1 | Symbols: | ubiquitin protein ligas... 76 1e-014
TAIR9_protein||AT4G12100.1 | Symbols: | ubiquitin protein ligas... 50 1e-006
>TAIR9_protein||AT3G46910.1 | Symbols: | ubiquitin protein ligase binding |
chr3:17278636-17279652 FORWARD
Length = 248
Score = 76 bits (186), Expect = 1e-014
Identities = 46/110 (41%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Frame = +1
Query: 358 TSPAVRVFKFNFIMN--KTDPKVYLDKAWILLKPALASILHEENLDRFYFGTINHASSLC 531
T+P +R+FK I + K D ++Y++ AW +LKPA+ +I +E D G N +
Sbjct: 3 TTPGLRIFK-PIIPHTPKPDSRIYVEDAWTMLKPAIRAIFLDEPQDFACSGLFNAVNKSW 61
Query: 532 FGNDAGEDLYKLIV*ECGEYISTNLESLAVHCSDDDPSLLLLPLEKFWLE 681
+GE LYKLI+ EC YIS ++SL C D DPSL L LEK WL+
Sbjct: 62 CEKSSGEALYKLILEECEIYISAAIQSLESQC-DTDPSLFLSLLEKCWLD 110
>TAIR9_protein||AT4G12100.1 | Symbols: | ubiquitin protein ligase binding |
chr4:7246453-7248127 REVERSE
Length = 435
Score = 50 bits (117), Expect = 1e-006
Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 17/120 (14%)
Frame = +1
Query: 325 PPMRCDDPPP--NTSPAVRVFKFNFIMNKTD-PKVYLDKAWILLKPALASILHEENL--- 486
P + +PPP N P N + + D K+YL KAW LLKPA+ IL ++
Sbjct: 48 PISQAREPPPIFNLDP-------NSVKDTQDRNKLYLAKAWDLLKPAIKIILDDDEYKKP 100
Query: 487 -DRFYFGTINHA-SSLCFGNDAGEDL-YKLIV*ECGEYISTNLESLAVHCS-DDDPSLLL 654
D F TI A C G+ +L + L+ EC +I+ ++SL +CS DDPS+ L
Sbjct: 101 GDVLCFTTIFRAVKRACLGDPRQSELVFNLVKHECEPHIAELIQSLEKNCSGSDDPSVFL 160
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 185,814,037
Number of Sequences: 33410
Number of Extensions: 185814037
Number of Successful Extensions: 10602379
Number of sequences better than 0.0: 0
|