BLASTX 7.6.2
Query= UN00156 /QuerySize=748
(747 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G06110.1 | Symbols: SKIP16 | SKIP16 (SKP1/ASK-... 364 4e-101
>TAIR9_protein||AT1G06110.1 | Symbols: SKIP16 | SKIP16 (SKP1/ASK-interacting
protein 16); protein binding | chr1:1853237-1854938 REVERSE
Length = 437
Score = 364 bits (933), Expect = 4e-101
Identities = 180/236 (76%), Positives = 204/236 (86%), Gaps = 5/236 (2%)
Frame = +1
Query: 55 MGLEEAGDLVLHIILSKIGPENTARVACVSKRLKVSASEDSLWSIFCSLDLNISTPLGPH 234
MGLE+AGDLVLHI+LSKIGPENTARVACVSKRLKVSASE+SLWSIFCS DLNISTPL PH
Sbjct: 1 MGLEDAGDLVLHIVLSKIGPENTARVACVSKRLKVSASEESLWSIFCSNDLNISTPLDPH 60
Query: 235 GDPSPSFKAAYQSWRESFRMYPWHLVKRVGRCWDNLKLWLRLNFPEAEATLRKGATEEDL 414
GDP+PSFK AYQ WRESFRMYPW+LVKRV CWDNLK WL LNFPEA+ATLRKG TE+DL
Sbjct: 61 GDPAPSFKRAYQLWRESFRMYPWNLVKRVRLCWDNLKQWLTLNFPEAKATLRKGVTEDDL 120
Query: 415 EEFESALKLKLPLPTRLLYRFVDGQESSS-----SSNGLIGGYSVYSHEVNVCLLPLKEV 579
+EFE++LK+KLPLPTRLLYRFVDGQE SS S GLIGGYS YSH+VNV LLPLKEV
Sbjct: 121 QEFETSLKVKLPLPTRLLYRFVDGQELSSPNGLDGSLGLIGGYSAYSHDVNVYLLPLKEV 180
Query: 580 IRETNETMSDLFGVSNGSNYIVVAASMMATLKMFFLDCSNGQLYTGTSTRQMLPCV 747
+RET E+ G S+ + IV+AAS++A+LK+F LDC+ GQL+TGTS RQ+LPCV
Sbjct: 181 MRETKESFMRDLGFSSRLDLIVMAASVVASLKIFLLDCTTGQLFTGTSNRQLLPCV 236
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 364,953,244
Number of Sequences: 33410
Number of Extensions: 364953244
Number of Successful Extensions: 21046454
Number of sequences better than 0.0: 0
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