BLASTX 7.6.2
Query= UN00224 /QuerySize=950
(949 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G20225.1 | Symbols: | FUNCTIONS IN: molecular... 401 4e-112
TAIR9_protein||AT1G76020.1 | Symbols: | INVOLVED IN: biological... 317 8e-087
>TAIR9_protein||AT1G20225.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole;
CONTAINS InterPro DOMAIN/s: Thioredoxin-like fold (InterPro:IPR012336);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G76020.1); Has 156 Blast hits to 152 proteins in 51 species:
Archae - 0; Bacteria - 81; Metazoa - 14; Fungi - 6; Plants - 28;
Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). |
chr1:7007966-7009318 REVERSE
Length = 234
Score = 401 bits (1029), Expect = 4e-112
Identities = 192/233 (82%), Positives = 211/233 (90%)
Frame = +1
Query: 31 MIRTALLIVALLVGTSVHAQLVPPPRRDGFVYPPGRKIEPDTILIEAYFDPVCPDCGDAW 210
MIRTAL+ V VGT V AQL+PP RRDGF+YPPGRKI+ DTILIEAY DPVCPDC DAW
Sbjct: 2 MIRTALVFVVFFVGTVVQAQLIPPARRDGFLYPPGRKIDRDTILIEAYIDPVCPDCRDAW 61
Query: 211 EPLKLAVDHYGSRVALVLHLIPLPFHDNAFVVSRALHIVNTLDSNATFGLLEGIFKHQAL 390
EPLKLA+DHYGSRVALVLHLIPLPFHDNAFV SRALHIV+TL++NATF LLEGIFKHQ L
Sbjct: 62 EPLKLAIDHYGSRVALVLHLIPLPFHDNAFVASRALHIVDTLNANATFNLLEGIFKHQTL 121
Query: 391 FYNSQTQFMPRPAVVDKLVKLGTVTLGSSFHYPLKSGFRNSQSDLATRVSFKYSVSRGVS 570
FYNSQTQ M RPAVV++L+KLGTVTLG+S+H PLKSGF NS+SDLATRVSFKYSVSRGVS
Sbjct: 122 FYNSQTQLMSRPAVVEELIKLGTVTLGNSYHSPLKSGFSNSKSDLATRVSFKYSVSRGVS 181
Query: 571 ATPTFYVNGFELPDAGSPIDFEGWKNTIDPLVKPREAKIKDTFLSFLTQPSY* 729
ATPTFYVNGFELP AGSP D+EGW++TIDPLVKP+E I+DTFLSFLTQPSY*
Sbjct: 182 ATPTFYVNGFELPGAGSPKDYEGWRDTIDPLVKPQEVDIRDTFLSFLTQPSY* 234
>TAIR9_protein||AT1G76020.1 | Symbols: | INVOLVED IN: biological_process
unknown; LOCATED IN: cell wall, vacuole; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold
(InterPro:IPR012336); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G20225.1); Has 118 Blast hits to 116 proteins
in 37 species: Archae - 0; Bacteria - 51; Metazoa - 12; Fungi - 4;
Plants - 28; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). |
chr1:28532243-28533542 REVERSE
Length = 226
Score = 317 bits (811), Expect = 8e-087
Identities = 153/226 (67%), Positives = 182/226 (80%), Gaps = 2/226 (0%)
Frame = +1
Query: 31 MIRTALLIVALLVGTSVHAQLVPPPRRDGFVYPPGRKIEPDTILIEAYFDPVCPDCGDAW 210
MIR LL + +V T V AQLVPP R+DGFVYPPG + +PDTILIEAYFDPVCPD D+W
Sbjct: 1 MIRAVLLFLVFVVETRVQAQLVPPVRQDGFVYPPGHRFDPDTILIEAYFDPVCPDSRDSW 60
Query: 211 EPLKLAVDHYGSRVALVLHLIPLPFHDNAFVVSRALHIVNTLDSNATFGLLEGIFKHQAL 390
PLK A+ HYGSRVAL+LHL+PLP+HDNA+V SRALHIVNT+ +NATF LLEG FKHQ+L
Sbjct: 61 PPLKQALHHYGSRVALLLHLLPLPYHDNAYVTSRALHIVNTVHANATFSLLEGFFKHQSL 120
Query: 391 FYNSQTQFMPRPAVVDKLVKLGTVTLGSSFHYPLKSGFRNSQSDLATRVSFKYSVSRGVS 570
FYN+QTQ + RPAVV+K+V+LGTV+LG+S+ LKSGF + +SD ATRVSFKYS SRGV
Sbjct: 121 FYNAQTQLLSRPAVVEKIVELGTVSLGNSYQSVLKSGFSDKKSDRATRVSFKYSASRGVY 180
Query: 571 ATPTFYVNGFELPDAGSPIDFEGWKNTIDPLVKPREAKIKDTFLSF 708
TPTFYVNGF L DA SP +F GWK IDPLV+ E ++D F+ F
Sbjct: 181 GTPTFYVNGFVLSDAASPSNFGGWKKIIDPLVQAHE--MEDNFIPF 224
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 550,567,218
Number of Sequences: 33410
Number of Extensions: 550567218
Number of Successful Extensions: 31396183
Number of sequences better than 0.0: 0
|
