BLASTX 7.6.2
Query= UN00251 /QuerySize=681
(680 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G01410.1 | Symbols: | RNase H domain-containi... 175 3e-044
TAIR9_protein||AT3G01410.2 | Symbols: | RNase H domain-containi... 175 3e-044
TAIR9_protein||AT5G51080.1 | Symbols: | RNase H domain-containi... 130 9e-031
TAIR9_protein||AT5G51080.2 | Symbols: | RNase H domain-containi... 130 9e-031
TAIR9_protein||AT5G51080.3 | Symbols: | RNase H domain-containi... 130 9e-031
TAIR9_protein||AT1G24090.1 | Symbols: | RNase H domain-containi... 122 3e-028
>TAIR9_protein||AT3G01410.1 | Symbols: | RNase H domain-containing protein |
chr3:153650-155439 REVERSE
Length = 295
Score = 175 bits (442), Expect = 3e-044
Identities = 90/162 (55%), Positives = 113/162 (69%), Gaps = 7/162 (4%)
Frame = +1
Query: 52 PFALLAIAMARREDRSLPKDSYCTIEFDGASRGSPGRAGAGAVLRAPDNTVIYFSREGLG 231
P +LL R+ D CTIEFDGAS+G+PG+AGAGAVLRA DN+V+++ REG+G
Sbjct: 140 PSSLLTRTPIRQNDS-------CTIEFDGASKGNPGKAGAGAVLRASDNSVLFYLREGVG 192
Query: 232 FATNNVAEYRAFNFGLEFAFNQGFTNVGVQGDSQLVCKQVRGEWATRDPKMTQLCGQAQE 411
ATNNVAEYRA GL A ++GF NV V GDS LVC QV+G W T PKM +LC QA+E
Sbjct: 193 NATNNVAEYRALLLGLRSALDKGFKNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKE 252
Query: 412 LMSQFNSCDVQHVPREFNSAADAQANRATNLAEGEYQQDNAG 537
LM+ F + D++H+ RE NS AD QAN A LA+G+ Q + G
Sbjct: 253 LMNSFKTFDIKHIAREKNSEADKQANSAIFLADGQTQVISGG 294
>TAIR9_protein||AT3G01410.2 | Symbols: | RNase H domain-containing protein |
chr3:153650-155439 REVERSE
Length = 295
Score = 175 bits (442), Expect = 3e-044
Identities = 90/162 (55%), Positives = 113/162 (69%), Gaps = 7/162 (4%)
Frame = +1
Query: 52 PFALLAIAMARREDRSLPKDSYCTIEFDGASRGSPGRAGAGAVLRAPDNTVIYFSREGLG 231
P +LL R+ D CTIEFDGAS+G+PG+AGAGAVLRA DN+V+++ REG+G
Sbjct: 140 PSSLLTRTPIRQNDS-------CTIEFDGASKGNPGKAGAGAVLRASDNSVLFYLREGVG 192
Query: 232 FATNNVAEYRAFNFGLEFAFNQGFTNVGVQGDSQLVCKQVRGEWATRDPKMTQLCGQAQE 411
ATNNVAEYRA GL A ++GF NV V GDS LVC QV+G W T PKM +LC QA+E
Sbjct: 193 NATNNVAEYRALLLGLRSALDKGFKNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKE 252
Query: 412 LMSQFNSCDVQHVPREFNSAADAQANRATNLAEGEYQQDNAG 537
LM+ F + D++H+ RE NS AD QAN A LA+G+ Q + G
Sbjct: 253 LMNSFKTFDIKHIAREKNSEADKQANSAIFLADGQTQVISGG 294
>TAIR9_protein||AT5G51080.1 | Symbols: | RNase H domain-containing protein |
chr5:20769022-20770675 REVERSE
Length = 323
Score = 130 bits (326), Expect = 9e-031
Identities = 62/135 (45%), Positives = 90/135 (66%)
Frame = +1
Query: 118 CTIEFDGASRGSPGRAGAGAVLRAPDNTVIYFSREGLGFATNNVAEYRAFNFGLEFAFNQ 297
C IEFDGAS+G+PG +GA AVL+ D ++I+ R+GLG ATNN AEY GL+ A +
Sbjct: 186 CIIEFDGASKGNPGLSGAAAVLKTEDGSLIFKMRQGLGIATNNAAEYHGLILGLKHAIEK 245
Query: 298 GFTNVGVQGDSQLVCKQVRGEWATRDPKMTQLCGQAQELMSQFNSCDVQHVPREFNSAAD 477
G+T + V+ DS+LVC Q++G+W +++L +A++L + S ++ HV R NS AD
Sbjct: 246 GYTKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQLSDKCLSFEISHVLRSLNSDAD 305
Query: 478 AQANRATNLAEGEYQ 522
QAN A L+EGE +
Sbjct: 306 EQANMAARLSEGEVE 320
>TAIR9_protein||AT5G51080.2 | Symbols: | RNase H domain-containing protein |
chr5:20769022-20770675 REVERSE
Length = 323
Score = 130 bits (326), Expect = 9e-031
Identities = 62/135 (45%), Positives = 90/135 (66%)
Frame = +1
Query: 118 CTIEFDGASRGSPGRAGAGAVLRAPDNTVIYFSREGLGFATNNVAEYRAFNFGLEFAFNQ 297
C IEFDGAS+G+PG +GA AVL+ D ++I+ R+GLG ATNN AEY GL+ A +
Sbjct: 186 CIIEFDGASKGNPGLSGAAAVLKTEDGSLIFKMRQGLGIATNNAAEYHGLILGLKHAIEK 245
Query: 298 GFTNVGVQGDSQLVCKQVRGEWATRDPKMTQLCGQAQELMSQFNSCDVQHVPREFNSAAD 477
G+T + V+ DS+LVC Q++G+W +++L +A++L + S ++ HV R NS AD
Sbjct: 246 GYTKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQLSDKCLSFEISHVLRSLNSDAD 305
Query: 478 AQANRATNLAEGEYQ 522
QAN A L+EGE +
Sbjct: 306 EQANMAARLSEGEVE 320
>TAIR9_protein||AT5G51080.3 | Symbols: | RNase H domain-containing protein |
chr5:20769022-20770486 REVERSE
Length = 260
Score = 130 bits (326), Expect = 9e-031
Identities = 62/135 (45%), Positives = 90/135 (66%)
Frame = +1
Query: 118 CTIEFDGASRGSPGRAGAGAVLRAPDNTVIYFSREGLGFATNNVAEYRAFNFGLEFAFNQ 297
C IEFDGAS+G+PG +GA AVL+ D ++I+ R+GLG ATNN AEY GL+ A +
Sbjct: 123 CIIEFDGASKGNPGLSGAAAVLKTEDGSLIFKMRQGLGIATNNAAEYHGLILGLKHAIEK 182
Query: 298 GFTNVGVQGDSQLVCKQVRGEWATRDPKMTQLCGQAQELMSQFNSCDVQHVPREFNSAAD 477
G+T + V+ DS+LVC Q++G+W +++L +A++L + S ++ HV R NS AD
Sbjct: 183 GYTKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQLSDKCLSFEISHVLRSLNSDAD 242
Query: 478 AQANRATNLAEGEYQ 522
QAN A L+EGE +
Sbjct: 243 EQANMAARLSEGEVE 257
>TAIR9_protein||AT1G24090.1 | Symbols: | RNase H domain-containing protein |
chr1:8520834-8524690 FORWARD
Length = 536
Score = 122 bits (304), Expect = 3e-028
Identities = 62/146 (42%), Positives = 93/146 (63%), Gaps = 3/146 (2%)
Frame = +1
Query: 76 MARREDRSLPKDSYCTIEFDGASRGSPGRAGAGAVLRAPDNTVIYFSREGLGFATNNVAE 255
+++ E + D C IEFDGAS+G+PG +GA AVL+ D ++I R+GLG ATNN AE
Sbjct: 203 LSKVEPSAYISDETCFIEFDGASKGNPGLSGAAAVLKTEDGSLICRVRQGLGIATNNAAE 262
Query: 256 YRAFNFGLEFAFNQGFTNVGVQGDSQLVC---KQVRGEWATRDPKMTQLCGQAQELMSQF 426
Y A GL++A +G+ N+ V+GDS+LVC +Q++G+W + +L +A+ L ++
Sbjct: 263 YHALILGLKYAIEKGYKNIKVKGDSKLVCMQKQQIKGQWKVNHEVLAKLHKEAKLLCNKC 322
Query: 427 NSCDVQHVPREFNSAADAQANRATNL 504
S ++ HV R N+ AD QAN A L
Sbjct: 323 VSFEISHVLRNLNADADEQANLAVRL 348
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 642,258,061
Number of Sequences: 33410
Number of Extensions: 642258061
Number of Successful Extensions: 36765934
Number of sequences better than 0.0: 0
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