BLASTX 7.6.2
Query= UN00320 /QuerySize=1096
(1095 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G21320.2 | Symbols: | nucleic acid binding / ... 296 2e-080
TAIR9_protein||AT1G21320.1 | Symbols: | nucleic acid binding / ... 285 3e-077
TAIR9_protein||AT1G76940.1 | Symbols: | RNA recognition motif (... 260 2e-069
TAIR9_protein||AT3G13700.2 | Symbols: | RNA-binding protein, pu... 52 8e-007
>TAIR9_protein||AT1G21320.2 | Symbols: | nucleic acid binding / nucleotide
binding | chr1:7462834-7466164 REVERSE
Length = 254
Score = 296 bits (757), Expect = 2e-080
Identities = 162/244 (66%), Positives = 182/244 (74%), Gaps = 22/244 (9%)
Frame = -1
Query: 1026 QPPMSSISHGGPLKRHRSDFE-----------HDYVSRDEDRGILHSVRDTRTIGSAYDR 880
Q P+SS H P KR RSDF+ H Y+S+DEDRGI HSV+DTR+IGSAYDR
Sbjct: 13 QLPISSNPHVLPPKRPRSDFQGTPYLIPSGDMHSYLSQDEDRGIPHSVKDTRSIGSAYDR 72
Query: 879 YLQSAQTSSRPSEEAGRFHGVG--RGGG-------DMGELMSGRGGVQHPDFGPPNGRDL 727
YLQS QT PSEEAG F+GVG R GG MGELM+G GG DF PNGRD+
Sbjct: 73 YLQSMQTFFVPSEEAGPFNGVGMVRQGGSNMMPGPSMGELMAGCGGSLPSDF-RPNGRDM 131
Query: 726 GFGQQDLVGRRPGRELLRLPPDASNTLFVEGLPSNCSRREVSHIFRPFLGYKEARLVTKD 547
GFGQ D VG RPGRE LPPD SNTL+VEGLPSNCSRREVSHIFRPF+GY+E RLVT+D
Sbjct: 132 GFGQLDSVG-RPGREPHPLPPDVSNTLYVEGLPSNCSRREVSHIFRPFVGYREVRLVTQD 190
Query: 546 TKQRNGDPVVLCFVDFESPACAATARTALQGYRMDENEPDSKNLQIQFSRNPGRRAGQLG 367
+K R+GDP VLCFVDFE+ ACAATA +ALQ YRMDE+EPDSK L++QF RNPG R GQ G
Sbjct: 191 SKHRSGDPTVLCFVDFENSACAATALSALQDYRMDEDEPDSKILRLQFFRNPGPRPGQRG 250
Query: 366 GRR* 355
GRR*
Sbjct: 251 GRR* 254
Score = 218 bits (553), Expect = 8e-057
Identities = 110/150 (73%), Positives = 123/150 (82%), Gaps = 2/150 (1%)
Frame = -1
Query: 807 GGDMGELMSGRGGVQHPDFGPPNGRDLGFGQQDLVGRRPGRELLRLPPDASNTLFVEGLP 628
G MGELM+G GG DF PNGRD+GFGQ D VG RPGRE LPPD SNTL+VEGLP
Sbjct: 106 GPSMGELMAGCGGSLPSDF-RPNGRDMGFGQLDSVG-RPGREPHPLPPDVSNTLYVEGLP 163
Query: 627 SNCSRREVSHIFRPFLGYKEARLVTKDTKQRNGDPVVLCFVDFESPACAATARTALQGYR 448
SNCSRREVSHIFRPF+GY+E RLVT+D+K R+GDP VLCFVDFE+ ACAATA +ALQ YR
Sbjct: 164 SNCSRREVSHIFRPFVGYREVRLVTQDSKHRSGDPTVLCFVDFENSACAATALSALQDYR 223
Query: 447 MDENEPDSKNLQIQFSRNPGRRAGQLGGRR 358
MDE+EPDSK L++QF RNPG R GQ GGRR
Sbjct: 224 MDEDEPDSKILRLQFFRNPGPRPGQRGGRR 253
>TAIR9_protein||AT1G21320.1 | Symbols: | nucleic acid binding / nucleotide
binding | chr1:7462834-7465200 REVERSE
Length = 422
Score = 285 bits (729), Expect = 3e-077
Identities = 150/212 (70%), Positives = 168/212 (79%), Gaps = 11/212 (5%)
Frame = -1
Query: 963 HDYVSRDEDRGILHSVRDTRTIGSAYDRYLQSAQTSSRPSEEAGRFHGVG--RGGG---- 802
H Y+S+DEDRGI HSV+DTR+IGSAYDRYLQS QT PSEEAG F+GVG R GG
Sbjct: 213 HSYLSQDEDRGIPHSVKDTRSIGSAYDRYLQSMQTFFVPSEEAGPFNGVGMVRQGGSNMM 272
Query: 801 ---DMGELMSGRGGVQHPDFGPPNGRDLGFGQQDLVGRRPGRELLRLPPDASNTLFVEGL 631
MGELM+G GG DF PNGRD+GFGQ D VG RPGRE LPPD SNTL+VEGL
Sbjct: 273 PGPSMGELMAGCGGSLPSDF-RPNGRDMGFGQLDSVG-RPGREPHPLPPDVSNTLYVEGL 330
Query: 630 PSNCSRREVSHIFRPFLGYKEARLVTKDTKQRNGDPVVLCFVDFESPACAATARTALQGY 451
PSNCSRREVSHIFRPF+GY+E RLVT+D+K R+GDP VLCFVDFE+ ACAATA +ALQ Y
Sbjct: 331 PSNCSRREVSHIFRPFVGYREVRLVTQDSKHRSGDPTVLCFVDFENSACAATALSALQDY 390
Query: 450 RMDENEPDSKNLQIQFSRNPGRRAGQLGGRR* 355
RMDE+EPDSK L++QF RNPG R GQ GGRR*
Sbjct: 391 RMDEDEPDSKILRLQFFRNPGPRPGQRGGRR* 422
Score = 218 bits (553), Expect = 8e-057
Identities = 110/150 (73%), Positives = 123/150 (82%), Gaps = 2/150 (1%)
Frame = -1
Query: 807 GGDMGELMSGRGGVQHPDFGPPNGRDLGFGQQDLVGRRPGRELLRLPPDASNTLFVEGLP 628
G MGELM+G GG DF PNGRD+GFGQ D VG RPGRE LPPD SNTL+VEGLP
Sbjct: 274 GPSMGELMAGCGGSLPSDF-RPNGRDMGFGQLDSVG-RPGREPHPLPPDVSNTLYVEGLP 331
Query: 627 SNCSRREVSHIFRPFLGYKEARLVTKDTKQRNGDPVVLCFVDFESPACAATARTALQGYR 448
SNCSRREVSHIFRPF+GY+E RLVT+D+K R+GDP VLCFVDFE+ ACAATA +ALQ YR
Sbjct: 332 SNCSRREVSHIFRPFVGYREVRLVTQDSKHRSGDPTVLCFVDFENSACAATALSALQDYR 391
Query: 447 MDENEPDSKNLQIQFSRNPGRRAGQLGGRR 358
MDE+EPDSK L++QF RNPG R GQ GGRR
Sbjct: 392 MDEDEPDSKILRLQFFRNPGPRPGQRGGRR 421
>TAIR9_protein||AT1G76940.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:28902707-28904085 REVERSE
Length = 234
Score = 260 bits (662), Expect = 2e-069
Identities = 145/244 (59%), Positives = 161/244 (65%), Gaps = 26/244 (10%)
Frame = -1
Query: 1047 MGDGYWNQPPMSSISHGGPLKRHRSDFE-----------HDYVSRDEDRGILHSVRDTRT 901
M DGYWNQ GGP+KR RSDFE Y RDED V DTRT
Sbjct: 1 MADGYWNQQRQQHHPPGGPMKRPRSDFEAPSSTMTIGHGGGYYPRDEDL----DVPDTRT 56
Query: 900 IGSAYDRYLQSAQTSSRPSEEAGRFHGVGRGGG----DMGELMSGRGGVQHPDFGPPNGR 733
IGSAYDRYLQS Q+ S GR G G GGG + + M RGGV D G PNG
Sbjct: 57 IGSAYDRYLQSVQSGEGGSVSMGRSGGGGGGGGGNVQTIDDFMLRRGGVLPLDHG-PNGH 115
Query: 732 DLGFGQQDLVGRRPGRELLRLPPDASNTLFVEGLPSNCSRREVSHIFRPFLGYKEARLVT 553
+GF + VGRR LP DASNTL+VEGLPSNCSRREV+HIFRPF+GY+E RLVT
Sbjct: 116 TIGFDPPEPVGRR------NLPSDASNTLYVEGLPSNCSRREVAHIFRPFVGYREVRLVT 169
Query: 552 KDTKQRNGDPVVLCFVDFESPACAATARTALQGYRMDENEPDSKNLQIQFSRNPGRRAGQ 373
KD+K RNGDP+VLCFVDF +PACAATA +ALQGYRMDENE DSK L++QFSR PG R GQ
Sbjct: 170 KDSKHRNGDPIVLCFVDFTNPACAATALSALQGYRMDENESDSKFLRLQFSRKPGSRPGQ 229
Query: 372 LGGR 361
G R
Sbjct: 230 RGRR 233
>TAIR9_protein||AT3G13700.2 | Symbols: | RNA-binding protein, putative |
chr3:4490859-4492632 REVERSE
Length = 288
Score = 52 bits (122), Expect = 8e-007
Identities = 40/109 (36%), Positives = 54/109 (49%), Gaps = 7/109 (6%)
Frame = -1
Query: 693 PGRELLRLPPDASNTLFVEGLPSNCSRREVSHIFRPFLGYKEARLVTKDTKQRNGDPVVL 514
P LL P A NTLFV GLP++ RE+ ++FR G++ +L K T + GD VV
Sbjct: 24 PQLPLLADEPGAINTLFVSGLPNDVKAREIHNLFRRRHGFESCQL--KYTGR--GDQVV- 78
Query: 513 CFVDFESPACAATARTALQGYRMDENEPDSKNLQIQFSRNPGRRAGQLG 367
F F S A A L G + D NL I+ +R+ RR + G
Sbjct: 79 AFATFTSHRFALAAMNELNGVKFDPQ--TGSNLHIELARSNSRRKERPG 125
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 685,062,034
Number of Sequences: 33410
Number of Extensions: 685062034
Number of Successful Extensions: 36828297
Number of sequences better than 0.0: 0
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