BLASTX 7.6.2
Query= UN00347 /QuerySize=1054
(1053 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G66670.1 | Symbols: CLPP3, NCLPP3 | CLPP3; ser... 508 4e-144
TAIR9_protein||AT5G45390.1 | Symbols: CLPP4, NCLPP4 | CLPP4 (CLP... 198 6e-051
TAIR9_protein||AT1G02560.1 | Symbols: CLPP5, NCLPP5, NCLPP1 | CL... 194 1e-049
TAIR9_protein||AT5G23140.1 | Symbols: CLPP2, NCLPP7 | NCLPP7 (NU... 157 2e-038
TAIR9_protein||AT1G11750.1 | Symbols: CLPP6, NCLPP1, NCLPP6 | CL... 149 3e-036
TAIR9_protein||ATCG00670.1 | Symbols: CLPP1, PCLPP | Encodes the... 134 1e-031
TAIR9_protein||AT1G12410.1 | Symbols: CLPR2, NCLPP2, CLP2 | CLP2... 132 3e-031
TAIR9_protein||AT1G09130.1 | Symbols: | ATP-dependent Clp prote... 91 8e-019
TAIR9_protein||AT1G09130.2 | Symbols: | ATP-dependent Clp prote... 91 8e-019
>TAIR9_protein||AT1G66670.1 | Symbols: CLPP3, NCLPP3 | CLPP3; serine-type
endopeptidase | chr1:24863995-24865646 REVERSE
Length = 310
Score = 508 bits (1306), Expect = 4e-144
Identities = 249/282 (88%), Positives = 267/282 (94%), Gaps = 1/282 (0%)
Frame = +2
Query: 11 RHHRIPKRAKPFCVRSSLNLSGPQPRQTLSSNWDVSKFSVDAVAQSPSRLPSFEELDTTN 190
R+HRIPK +KPFCVRSS++LS P PRQTLSSNWDVS FS+D+VAQSPSRLPSFEELDTTN
Sbjct: 30 RNHRIPKTSKPFCVRSSMSLSKP-PRQTLSSNWDVSSFSIDSVAQSPSRLPSFEELDTTN 88
Query: 191 MLLRRRIVFLGSQVDDMTADLVISQLLLLDAQDSERDITLFINSPGGSITAGMGIYDAMK 370
MLLR+RIVFLGSQVDDMTADLVISQLLLLDA+DSERDITLFINSPGGSITAGMGIYDAMK
Sbjct: 89 MLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIYDAMK 148
Query: 371 QCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNSKVMIHQPLGSAGGKATEMSIRVRE 550
QCKADVSTVCLGLAASMGAFLLASGSKGKR+CMPNSKVMIHQPLG+AGGKATEMSIR+RE
Sbjct: 149 QCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMSIRIRE 208
Query: 551 MMYHKIKLSKIFSRITGKPESEIEGDTDRDYFLNPWEAKEYGLVDAVIDDGKPGLVAPIG 730
MMYHKIKL+KIFSRITGKPESEIE DTDRD FLNPWEAKEYGL+DAVIDDGKPGL+APIG
Sbjct: 209 MMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVIDDGKPGLIAPIG 268
Query: 731 DGTPPPNTKVWDFWKVEGTKNDNKDLPTEQSVIQNGSATPE* 856
DGTPPP TKVWD WKVEGTK DN +LP+E+S+ QNG A E*
Sbjct: 269 DGTPPPKTKVWDLWKVEGTKKDNTNLPSERSMTQNGYAAIE* 310
>TAIR9_protein||AT5G45390.1 | Symbols: CLPP4, NCLPP4 | CLPP4 (CLP PROTEASE P4);
serine-type endopeptidase | chr5:18396351-18397586 FORWARD
Length = 293
Score = 198 bits (502), Expect = 6e-051
Identities = 102/226 (45%), Positives = 149/226 (65%), Gaps = 1/226 (0%)
Frame = +2
Query: 68 LSGPQPRQTLSSNWDVSKFSVDAVAQSPSRLPSFEELDTTNMLLRRRIVFLGSQVDDMTA 247
L P R T S + S++ ++Q+ E D +LLR RIVFLGS +DD A
Sbjct: 43 LISPPLRTTSPSPLRFANASIE-MSQTQESAIRGAESDVMGLLLRERIVFLGSSIDDFVA 101
Query: 248 DLVISQLLLLDAQDSERDITLFINSPGGSITAGMGIYDAMKQCKADVSTVCLGLAASMGA 427
D ++SQLLLLDA+D ++DI LFINSPGGS++A M IYD ++ +ADVST+ LG+AAS +
Sbjct: 102 DAIMSQLLLLDAKDPKKDIKLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTAS 161
Query: 428 FLLASGSKGKRFCMPNSKVMIHQPLGSAGGKATEMSIRVREMMYHKIKLSKIFSRITGKP 607
+L +G+KGKRF MPN+++MIHQPLG A G+A ++ I+ +E+M++K ++ I + T +
Sbjct: 162 IILGAGTKGKRFAMPNTRIMIHQPLGGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRS 221
Query: 608 ESEIEGDTDRDYFLNPWEAKEYGLVDAVIDDGKPGLVAPIGDGTPP 745
++ D DRD +++P EA EYGL+D VID + P+ D P
Sbjct: 222 FEQVLKDIDRDRYMSPIEAVEYGLIDGVIDGDSIIPLEPVPDRVKP 267
>TAIR9_protein||AT1G02560.1 | Symbols: CLPP5, NCLPP5, NCLPP1 | CLPP5 (NUCLEAR
ENCODED CLP PROTEASE 5); serine-type endopeptidase | chr1:538000-539805
FORWARD
Length = 299
Score = 194 bits (491), Expect = 1e-049
Identities = 94/191 (49%), Positives = 132/191 (69%)
Frame = +2
Query: 122 FSVDAVAQSPSRLPSFEELDTTNMLLRRRIVFLGSQVDDMTADLVISQLLLLDAQDSERD 301
F A Q P + + L + RI+ G VDD A+++++QLL LDA D +D
Sbjct: 95 FPAYAQGQGPPPMVQERFQSIISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKD 154
Query: 302 ITLFINSPGGSITAGMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNSK 481
I +++NSPGGS+TAGM I+D M+ + DVSTVC+GLAASMGAFLL++G+KGKR+ +PNS+
Sbjct: 155 IVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSR 214
Query: 482 VMIHQPLGSAGGKATEMSIRVREMMYHKIKLSKIFSRITGKPESEIEGDTDRDYFLNPWE 661
+MIHQPLG A G T++ I+ EM++HK L+ + TG+ +I DTDRD+F++ E
Sbjct: 215 IMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKE 274
Query: 662 AKEYGLVDAVI 694
AKEYGL+D VI
Sbjct: 275 AKEYGLIDGVI 285
>TAIR9_protein||AT5G23140.1 | Symbols: CLPP2, NCLPP7 | NCLPP7 (NUCLEAR-ENCODED
CLP PROTEASE P7); serine-type endopeptidase | chr5:7783811-7784826
FORWARD
Length = 242
Score = 157 bits (395), Expect = 2e-038
Identities = 70/174 (40%), Positives = 123/174 (70%)
Frame = +2
Query: 179 DTTNMLLRRRIVFLGSQVDDMTADLVISQLLLLDAQDSERDITLFINSPGGSITAGMGIY 358
D + LL+ RI+ + ++D T+ +V++QLL L++++ + I +++NSPGG +TAG+ IY
Sbjct: 48 DIFSRLLKERIICINGPINDDTSHVVVAQLLYLESENPSKPIHMYLNSPGGHVTAGLAIY 107
Query: 359 DAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNSKVMIHQPLGSAGGKATEMSI 538
D M+ ++ +ST+CLG AASM + LLA+G+KG+R +PN+ VMIHQP G G+A +++I
Sbjct: 108 DTMQYIRSPISTICLGQAASMASLLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAKDITI 167
Query: 539 RVREMMYHKIKLSKIFSRITGKPESEIEGDTDRDYFLNPWEAKEYGLVDAVIDD 700
++++ L++++ + TG+P + + DRD+F+ P EAK +G++D VID+
Sbjct: 168 HTKQIVRVWDALNELYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDEVIDE 221
>TAIR9_protein||AT1G11750.1 | Symbols: CLPP6, NCLPP1, NCLPP6 | CLPP6;
serine-type endopeptidase | chr1:3967609-3969535 FORWARD
Length = 272
Score = 149 bits (376), Expect = 3e-036
Identities = 74/183 (40%), Positives = 115/183 (62%)
Frame = +2
Query: 149 PSRLPSFEELDTTNMLLRRRIVFLGSQVDDMTADLVISQLLLLDAQDSERDITLFINSPG 328
PS + LD +++L R RI+F+G ++ A VISQL+ L + D + DI +++N PG
Sbjct: 86 PSVMTPGGPLDLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLNCPG 145
Query: 329 GSITAGMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNSKVMIHQPLGS 508
GS + + IYD M K V TV G+AAS GA LLA G KG R+ MPN++VMIHQP
Sbjct: 146 GSTYSVLAIYDCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVMIHQPQTG 205
Query: 509 AGGKATEMSIRVREMMYHKIKLSKIFSRITGKPESEIEGDTDRDYFLNPWEAKEYGLVDA 688
GG ++ +V E + + K+ ++++ TG+P +++ T+RD FL+ EA E+GL+D
Sbjct: 206 CGGHVEDVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEALEFGLIDG 265
Query: 689 VID 697
+++
Sbjct: 266 LLE 268
>TAIR9_protein||ATCG00670.1 | Symbols: CLPP1, PCLPP | Encodes the only ClpP
(caseinolytic protease) encoded within the plastid genome. Contains a
highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp).
Part of the 350 kDa chloroplast Clp complex. The name reflects
nomenclature described in Adam et. al (2001). | chrC:69910-71882
REVERSE
Length = 197
Score = 134 bits (336), Expect = 1e-031
Identities = 68/173 (39%), Positives = 108/173 (62%), Gaps = 1/173 (0%)
Frame = +2
Query: 176 LDTTNMLLRRRIVFLGSQVDDMTADLVISQLLLLDAQDSERDITLFINSPGGSITAGMGI 355
+D N L R R+ FLG +VD ++ +IS ++ L + +D+ LFINSPGG + +GM I
Sbjct: 21 VDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAI 80
Query: 356 YDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNSKVMIHQPLGSAGGKAT-EM 532
YD M+ + DV T+C+GLAAS+ +F+L G+ KR P+++VMIHQP S T E
Sbjct: 81 YDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHARVMIHQPASSFYEAQTGEF 140
Query: 533 SIRVREMMYHKIKLSKIFSRITGKPESEIEGDTDRDYFLNPWEAKEYGLVDAV 691
+ E++ + +++++ + TGKP I D +RD F++ EA+ +G+VD V
Sbjct: 141 ILEAEELLKLRETITRVYVQRTGKPIWVISEDMERDVFMSATEAQAHGIVDLV 193
>TAIR9_protein||AT1G12410.1 | Symbols: CLPR2, NCLPP2, CLP2 | CLP2 (CLP PROTEASE
PROTEOLYTIC SUBUNIT 2); serine-type endopeptidase |
chr1:4223099-4224954 FORWARD
Length = 280
Score = 132 bits (332), Expect = 3e-031
Identities = 63/177 (35%), Positives = 105/177 (59%)
Frame = +2
Query: 164 SFEELDTTNMLLRRRIVFLGSQVDDMTADLVISQLLLLDAQDSERDITLFINSPGGSITA 343
+++ +D N L R R++F+G +D+ ++ +++ +L LD D R I +++N PGG +T
Sbjct: 84 TWQWVDIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLDDSRRIYMYLNGPGGDLTP 143
Query: 344 GMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNSKVMIHQPLGSAGGKA 523
+ IYD MK K+ V T C+GLA ++ FLLA+G KG RF MP S++ + P G+A G+A
Sbjct: 144 SLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPLSRIALQSPAGAARGQA 203
Query: 524 TEMSIRVREMMYHKIKLSKIFSRITGKPESEIEGDTDRDYFLNPWEAKEYGLVDAVI 694
++ +E+ + L ++ TG+P + D R N EA EYGL+D ++
Sbjct: 204 DDIQNEAKELSRIRDYLFNELAKNTGQPAERVFKDLSRVKRFNAEEAIEYGLIDKIV 260
>TAIR9_protein||AT1G09130.1 | Symbols: | ATP-dependent Clp protease proteolytic
subunit, putative | chr1:2940063-2942217 REVERSE
Length = 331
Score = 91 bits (225), Expect = 8e-019
Identities = 46/135 (34%), Positives = 82/135 (60%), Gaps = 2/135 (1%)
Frame = +2
Query: 329 GSITAGMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNSKVMIHQPLGS 508
G + G IYD++ Q K +V TVC+G A LL++G+KGKRF MP++K MI QP
Sbjct: 180 GMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVP 239
Query: 509 AGG--KATEMSIRVREMMYHKIKLSKIFSRITGKPESEIEGDTDRDYFLNPWEAKEYGLV 682
+ G A+++ IR +E++ ++ L ++ S+ TG + R Y+++ +AKE+G++
Sbjct: 240 SSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVI 299
Query: 683 DAVIDDGKPGLVAPI 727
D ++ G+ ++A +
Sbjct: 300 DRILWRGQEKIIADV 314
>TAIR9_protein||AT1G09130.2 | Symbols: | ATP-dependent Clp protease proteolytic
subunit, putative | chr1:2940063-2942217 REVERSE
Length = 331
Score = 91 bits (225), Expect = 8e-019
Identities = 46/135 (34%), Positives = 82/135 (60%), Gaps = 2/135 (1%)
Frame = +2
Query: 329 GSITAGMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNSKVMIHQPLGS 508
G + G IYD++ Q K +V TVC+G A LL++G+KGKRF MP++K MI QP
Sbjct: 180 GMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVP 239
Query: 509 AGG--KATEMSIRVREMMYHKIKLSKIFSRITGKPESEIEGDTDRDYFLNPWEAKEYGLV 682
+ G A+++ IR +E++ ++ L ++ S+ TG + R Y+++ +AKE+G++
Sbjct: 240 SSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVI 299
Query: 683 DAVIDDGKPGLVAPI 727
D ++ G+ ++A +
Sbjct: 300 DRILWRGQEKIIADV 314
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 729,229,929
Number of Sequences: 33410
Number of Extensions: 729229929
Number of Successful Extensions: 36865265
Number of sequences better than 0.0: 0
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