BLASTX 7.6.2
Query= UN00373 /QuerySize=1761
(1760 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G16845.1 | Symbols: VRN2 | VRN2 (REDUCED VERNA... 575 5e-164
TAIR9_protein||AT4G16845.2 | Symbols: VRN2 | VRN2 (REDUCED VERNA... 439 3e-123
TAIR9_protein||AT5G51230.1 | Symbols: EMF2, VEF2, CYR1 | EMF2 (E... 302 6e-082
TAIR9_protein||AT5G51230.2 | Symbols: EMF2, VEF2, CYR1 | EMF2 (E... 301 1e-081
TAIR9_protein||AT5G51230.3 | Symbols: EMF2, VEF2, CYR1 | EMF2 (E... 301 1e-081
TAIR9_protein||AT2G35670.1 | Symbols: FIS2, FIE2 | FIS2 (FERTILI... 168 1e-041
TAIR9_protein||AT4G16810.1 | Symbols: | FUNCTIONS IN: molecular... 154 2e-037
>TAIR9_protein||AT4G16845.1 | Symbols: VRN2 | VRN2 (REDUCED VERNALIZATION
RESPONSE 2); transcription factor | chr4:9476708-9479725 FORWARD
Length = 441
Score = 575 bits (1480), Expect = 5e-164
Identities = 287/382 (75%), Positives = 318/382 (83%), Gaps = 4/382 (1%)
Frame = -3
Query: 1509 MCRQNCCAKSSQEEEVVSPPDENLLIYCKPVRLYNILRIRSLFNPSFLPRCLSYKIRAKG 1330
MCRQNC AKSS EE V DENLLIYCKPVRLYNI +RSL NPSFLPRCL+YKI AK
Sbjct: 1 MCRQNCRAKSSPEE--VISTDENLLIYCKPVRLYNIFHLRSLGNPSFLPRCLNYKIGAKR 58
Query: 1329 KRKSGSAGIVVFNYKDCNNTLQKTEVTENCSCPFCYMTCGTFKGLQLHLNSFHDLLEFEF 1150
KRKS S G+VVFNYKDCNNTLQ+TEV E+CSCPFC M CG+FKGLQ HLNS HDL EFEF
Sbjct: 59 KRKSRSTGMVVFNYKDCNNTLQRTEVREDCSCPFCSMLCGSFKGLQFHLNSSHDLFEFEF 118
Query: 1149 PLSEEYQTVNVSVRLDAFESEEEGIHQEKFELISFCSKPRKRRQRGHRVNPSLLNVTFLP 970
L EEYQTVNVSV+L++F EEEG +KFE S CSKPRKRRQRG R N L V FLP
Sbjct: 119 KLLEEYQTVNVSVKLNSFIFEEEGSDDDKFEPFSLCSKPRKRRQRGGRNNTRRLKVCFLP 178
Query: 969 MDSPSLPNGTDNGTPLLSNGNHSLGYPVATDVAGQFGM--NNSPAIAQCSMNSNAKAVLA 796
+DSPSL NGT+NG LL++GN LGYP AT++AGQF M N PAIA S+++ AK +L
Sbjct: 179 LDSPSLANGTENGIALLNDGNRGLGYPEATELAGQFEMTSNIPPAIAHSSLDAGAKVILT 238
Query: 795 SEAVAHAAKTRKLSAERSEARSNLLLQKRQFYHSHRVQPMSLEQVMSDRDSEDEVDDDVA 616
+EAV A KTRKLSAERSEARS+LLLQKRQFYHSHRVQPM+LEQVMSDRDSEDEVDDDVA
Sbjct: 239 TEAVVPATKTRKLSAERSEARSHLLLQKRQFYHSHRVQPMALEQVMSDRDSEDEVDDDVA 298
Query: 615 DLEDRQMLDDFVDVNKNEKRFMHLWNSFVRKQRVVADGHIPWACEAFSKFHKEELLHSSP 436
D EDRQMLDDFVDVNK+EK+FMHLWNSFVRKQRV+ADGHI WACE FS+F+++EL S
Sbjct: 299 DFEDRQMLDDFVDVNKDEKQFMHLWNSFVRKQRVIADGHISWACEVFSRFYEKELHCYSS 358
Query: 435 LFWCWRLFMIKLWNIGLVDSAT 370
LFWCWRLF+IKLWN GLVDSAT
Sbjct: 359 LFWCWRLFLIKLWNHGLVDSAT 380
>TAIR9_protein||AT4G16845.2 | Symbols: VRN2 | VRN2 (REDUCED VERNALIZATION
RESPONSE 2); transcription factor | chr4:9477246-9479725 FORWARD
Length = 381
Score = 439 bits (1128), Expect = 3e-123
Identities = 225/320 (70%), Positives = 254/320 (79%), Gaps = 8/320 (2%)
Frame = -3
Query: 1305 IVVFNYKDCNNTLQKTE-VTENCSCPFCYMTCG-----TFKGLQLHLNSFHDLLEFEFPL 1144
+VVFNYKDCNNTLQ+TE CY+ T +GLQ HLNS HDL EFEF L
Sbjct: 1 MVVFNYKDCNNTLQRTEGRIVLVHFALCYVVASRWATITTEGLQFHLNSSHDLFEFEFKL 60
Query: 1143 SEEYQTVNVSVRLDAFESEEEGIHQEKFELISFCSKPRKRRQRGHRVNPSLLNVTFLPMD 964
EEYQTVNVSV+L++F EEEG +KFE S CSKPRKRRQRG R N L V FLP+D
Sbjct: 61 LEEYQTVNVSVKLNSFIFEEEGSDDDKFEPFSLCSKPRKRRQRGGRNNTRRLKVCFLPLD 120
Query: 963 SPSLPNGTDNGTPLLSNGNHSLGYPVATDVAGQFGM--NNSPAIAQCSMNSNAKAVLASE 790
SPSL NGT+NG LL++GN LGYP AT++AGQF M N PAIA S+++ AK +L +E
Sbjct: 121 SPSLANGTENGIALLNDGNRGLGYPEATELAGQFEMTSNIPPAIAHSSLDAGAKVILTTE 180
Query: 789 AVAHAAKTRKLSAERSEARSNLLLQKRQFYHSHRVQPMSLEQVMSDRDSEDEVDDDVADL 610
AV A KTRKLSAERSEARS+LLLQKRQFYHSHRVQPM+LEQVMSDRDSEDEVDDDVAD
Sbjct: 181 AVVPATKTRKLSAERSEARSHLLLQKRQFYHSHRVQPMALEQVMSDRDSEDEVDDDVADF 240
Query: 609 EDRQMLDDFVDVNKNEKRFMHLWNSFVRKQRVVADGHIPWACEAFSKFHKEELLHSSPLF 430
EDRQMLDDFVDVNK+EK+FMHLWNSFVRKQRV+ADGHI WACE FS+F+++EL S LF
Sbjct: 241 EDRQMLDDFVDVNKDEKQFMHLWNSFVRKQRVIADGHISWACEVFSRFYEKELHCYSSLF 300
Query: 429 WCWRLFMIKLWNIGLVDSAT 370
WCWRLF+IKLWN GLVDSAT
Sbjct: 301 WCWRLFLIKLWNHGLVDSAT 320
>TAIR9_protein||AT5G51230.1 | Symbols: EMF2, VEF2, CYR1 | EMF2 (EMBRYONIC FLOWER
2); DNA binding / transcription factor | chr5:20824153-20829344
FORWARD
Length = 632
Score = 302 bits (772), Expect = 6e-082
Identities = 161/320 (50%), Positives = 209/320 (65%), Gaps = 10/320 (3%)
Frame = -3
Query: 1308 GIVVFNYKDCNNTLQKTEVTENCSCPFCYMTCGTFKGLQLHLNSFHDLLEFEFPLSEEYQ 1129
G VVFNY+ NN LQKTEVTE+ SCPFC + C +FKGL+ HL S HDLL FEF ++EE+Q
Sbjct: 302 GNVVFNYRYYNNKLQKTEVTEDFSCPFCLVKCASFKGLRYHLPSTHDLLNFEFWVTEEFQ 361
Query: 1128 TVNVSVRLDAFESE-EEGIHQEKFELISFCSKPRKRRQRGHRVNPSL----LNVTFLPMD 964
VNVS++ + S+ E K + F SK +RR++ +V S L + +D
Sbjct: 362 AVNVSLKTETMISKVNEDDVDPKQQTFFFSSKKFRRRRQKSQVRSSRQGPHLGLGCEVLD 421
Query: 963 SPSLPNGTDNGTPLLSNGNH--SLGYPVATDVAGQFGMNNSPAIAQCSMNSNAKAVLASE 790
+ + + G H +G + + SPA Q + + +A
Sbjct: 422 KTDDAHSVRSEKSRIPPGKHYERIG---GAESGQRVPPGTSPADVQSCGDPDYVQSIAGS 478
Query: 789 AVAHAAKTRKLSAERSEARSNLLLQKRQFYHSHRVQPMSLEQVMSDRDSEDEVDDDVADL 610
+ AKTRK+S ERS+ R+ LLQKRQF+HSHR QPM+LEQV+SDRDSEDEVDDDVAD
Sbjct: 479 TMLQFAKTRKISIERSDLRNRSLLQKRQFFHSHRAQPMALEQVLSDRDSEDEVDDDVADF 538
Query: 609 EDRQMLDDFVDVNKNEKRFMHLWNSFVRKQRVVADGHIPWACEAFSKFHKEELLHSSPLF 430
EDR+MLDDFVDV K+EK+ MH+WNSFVRKQRV+ADGHIPWACEAFS+ H ++ + L
Sbjct: 539 EDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSRLHGPIMVRTPHLI 598
Query: 429 WCWRLFMIKLWNIGLVDSAT 370
WCWR+FM+KLWN GL+D+ T
Sbjct: 599 WCWRVFMVKLWNHGLLDART 618
Score = 70 bits (170), Expect = 4e-012
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 2/65 (3%)
Frame = -3
Query: 1515 ERMCRQNCCAKSSQEEEVVSPPDENLLIYCKPVRLYNILRIRSLFNPSFLPRCLSYKIRA 1336
E+MC ++ + S+EEE+ + +E+L YCKPV LYNI++ R++ NP FL RCL YKI A
Sbjct: 19 EQMCHEDSRLRISEEEEIAA--EESLAAYCKPVELYNIIQRRAIRNPLFLQRCLHYKIEA 76
Query: 1335 KGKRK 1321
K KR+
Sbjct: 77 KHKRR 81
>TAIR9_protein||AT5G51230.2 | Symbols: EMF2, VEF2, CYR1 | EMF2 (EMBRYONIC FLOWER
2); DNA binding / transcription factor | chr5:20824153-20829344
FORWARD
Length = 627
Score = 301 bits (769), Expect = 1e-081
Identities = 159/316 (50%), Positives = 206/316 (65%), Gaps = 7/316 (2%)
Frame = -3
Query: 1308 GIVVFNYKDCNNTLQKTEVTENCSCPFCYMTCGTFKGLQLHLNSFHDLLEFEFPLSEEYQ 1129
G VVFNY+ NN LQKTEVTE+ SCPFC + C +FKGL+ HL S HDLL FEF ++EE+Q
Sbjct: 302 GNVVFNYRYYNNKLQKTEVTEDFSCPFCLVKCASFKGLRYHLPSTHDLLNFEFWVTEEFQ 361
Query: 1128 TVNVSVRLDAFESE-EEGIHQEKFELISFCSKPRKRRQRGHRVNPSLLNVTFLPMDSPSL 952
VNVS++ + S+ E K + F + +K + R R P L + +D
Sbjct: 362 AVNVSLKTETMISKVNEDDVDPKQQTFFFSRRRQKSQVRSSRQGPH-LGLGCEVLDKTDD 420
Query: 951 PNGTDNGTPLLSNGNH--SLGYPVATDVAGQFGMNNSPAIAQCSMNSNAKAVLASEAVAH 778
+ + + G H +G + + SPA Q + + +A +
Sbjct: 421 AHSVRSEKSRIPPGKHYERIG---GAESGQRVPPGTSPADVQSCGDPDYVQSIAGSTMLQ 477
Query: 777 AAKTRKLSAERSEARSNLLLQKRQFYHSHRVQPMSLEQVMSDRDSEDEVDDDVADLEDRQ 598
AKTRK+S ERS+ R+ LLQKRQF+HSHR QPM+LEQV+SDRDSEDEVDDDVAD EDR+
Sbjct: 478 FAKTRKISIERSDLRNRSLLQKRQFFHSHRAQPMALEQVLSDRDSEDEVDDDVADFEDRR 537
Query: 597 MLDDFVDVNKNEKRFMHLWNSFVRKQRVVADGHIPWACEAFSKFHKEELLHSSPLFWCWR 418
MLDDFVDV K+EK+ MH+WNSFVRKQRV+ADGHIPWACEAFS+ H ++ + L WCWR
Sbjct: 538 MLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSRLHGPIMVRTPHLIWCWR 597
Query: 417 LFMIKLWNIGLVDSAT 370
+FM+KLWN GL+D+ T
Sbjct: 598 VFMVKLWNHGLLDART 613
Score = 70 bits (170), Expect = 4e-012
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 2/65 (3%)
Frame = -3
Query: 1515 ERMCRQNCCAKSSQEEEVVSPPDENLLIYCKPVRLYNILRIRSLFNPSFLPRCLSYKIRA 1336
E+MC ++ + S+EEE+ + +E+L YCKPV LYNI++ R++ NP FL RCL YKI A
Sbjct: 19 EQMCHEDSRLRISEEEEIAA--EESLAAYCKPVELYNIIQRRAIRNPLFLQRCLHYKIEA 76
Query: 1335 KGKRK 1321
K KR+
Sbjct: 77 KHKRR 81
>TAIR9_protein||AT5G51230.3 | Symbols: EMF2, VEF2, CYR1 | EMF2 (EMBRYONIC FLOWER
2); DNA binding / transcription factor | chr5:20824153-20829344
FORWARD
Length = 627
Score = 301 bits (769), Expect = 1e-081
Identities = 159/316 (50%), Positives = 206/316 (65%), Gaps = 7/316 (2%)
Frame = -3
Query: 1308 GIVVFNYKDCNNTLQKTEVTENCSCPFCYMTCGTFKGLQLHLNSFHDLLEFEFPLSEEYQ 1129
G VVFNY+ NN LQKTEVTE+ SCPFC + C +FKGL+ HL S HDLL FEF ++EE+Q
Sbjct: 302 GNVVFNYRYYNNKLQKTEVTEDFSCPFCLVKCASFKGLRYHLPSTHDLLNFEFWVTEEFQ 361
Query: 1128 TVNVSVRLDAFESE-EEGIHQEKFELISFCSKPRKRRQRGHRVNPSLLNVTFLPMDSPSL 952
VNVS++ + S+ E K + F + +K + R R P L + +D
Sbjct: 362 AVNVSLKTETMISKVNEDDVDPKQQTFFFSRRRQKSQVRSSRQGPH-LGLGCEVLDKTDD 420
Query: 951 PNGTDNGTPLLSNGNH--SLGYPVATDVAGQFGMNNSPAIAQCSMNSNAKAVLASEAVAH 778
+ + + G H +G + + SPA Q + + +A +
Sbjct: 421 AHSVRSEKSRIPPGKHYERIG---GAESGQRVPPGTSPADVQSCGDPDYVQSIAGSTMLQ 477
Query: 777 AAKTRKLSAERSEARSNLLLQKRQFYHSHRVQPMSLEQVMSDRDSEDEVDDDVADLEDRQ 598
AKTRK+S ERS+ R+ LLQKRQF+HSHR QPM+LEQV+SDRDSEDEVDDDVAD EDR+
Sbjct: 478 FAKTRKISIERSDLRNRSLLQKRQFFHSHRAQPMALEQVLSDRDSEDEVDDDVADFEDRR 537
Query: 597 MLDDFVDVNKNEKRFMHLWNSFVRKQRVVADGHIPWACEAFSKFHKEELLHSSPLFWCWR 418
MLDDFVDV K+EK+ MH+WNSFVRKQRV+ADGHIPWACEAFS+ H ++ + L WCWR
Sbjct: 538 MLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSRLHGPIMVRTPHLIWCWR 597
Query: 417 LFMIKLWNIGLVDSAT 370
+FM+KLWN GL+D+ T
Sbjct: 598 VFMVKLWNHGLLDART 613
Score = 70 bits (170), Expect = 4e-012
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 2/65 (3%)
Frame = -3
Query: 1515 ERMCRQNCCAKSSQEEEVVSPPDENLLIYCKPVRLYNILRIRSLFNPSFLPRCLSYKIRA 1336
E+MC ++ + S+EEE+ + +E+L YCKPV LYNI++ R++ NP FL RCL YKI A
Sbjct: 19 EQMCHEDSRLRISEEEEIAA--EESLAAYCKPVELYNIIQRRAIRNPLFLQRCLHYKIEA 76
Query: 1335 KGKRK 1321
K KR+
Sbjct: 77 KHKRR 81
>TAIR9_protein||AT2G35670.1 | Symbols: FIS2, FIE2 | FIS2 (FERTILIZATION
INDEPENDENT SEED 2); transcription factor | chr2:14992721-14996558
FORWARD
Length = 756
Score = 168 bits (425), Expect = 1e-041
Identities = 79/148 (53%), Positives = 105/148 (70%)
Frame = -3
Query: 813 AKAVLASEAVAHAAKTRKLSAERSEARSNLLLQKRQFYHSHRVQPMSLEQVMSDRDSEDE 634
AKA + V ++ ++L AER EA+ L+ RQFYHS +QP++ EQVMS+ DSE+E
Sbjct: 572 AKAEPSEPKVTRVSRRKELHAERCEAKRLERLKGRQFYHSQTMQPITFEQVMSNEDSENE 631
Query: 633 VDDDVADLEDRQMLDDFVDVNKNEKRFMHLWNSFVRKQRVVADGHIPWACEAFSKFHKEE 454
DD D+ +R L+ V V+K EKR+M+LWN FVRKQRV+ADGH+PWACE F+K HKEE
Sbjct: 632 TDDYALDISERLRLERLVGVSKEEKRYMYLWNIFVRKQRVIADGHVPWACEEFAKLHKEE 691
Query: 453 LLHSSPLFWCWRLFMIKLWNIGLVDSAT 370
+ +SS W WR+F IKLWN GL+ + T
Sbjct: 692 MKNSSSFDWWWRMFRIKLWNNGLICAKT 719
Score = 141 bits (355), Expect = 1e-033
Identities = 83/189 (43%), Positives = 113/189 (59%), Gaps = 6/189 (3%)
Frame = -3
Query: 1449 DENLLIYCKPVRLYNILRIRSLFNPSFLPRCLSYKIRAKGKRKSGSAGIVVFNYKDCNNT 1270
DEN++ Y KPV +Y L RS NP FL R L Y I+AK K+KS S G + FNY+D +N
Sbjct: 64 DENIIKYIKPVAVYKKLETRSKNNPYFLRRSLKYIIQAKKKKKSNSGGKIRFNYRDVSNK 123
Query: 1269 LQ-KTEVTENCSCPFCYMTCGTFKGLQLHLNSFHDLLEFEFPLSEEYQ--TVNVSVRLDA 1099
+ K EV EN SCPFC + CG +GLQLHL S HD +FEF +E+ V+VSV+ D
Sbjct: 124 MTLKAEVVENFSCPFCLIPCGGHEGLQLHLKSSHDAFKFEFYRAEKDHGPEVDVSVKSDT 183
Query: 1098 --FESEEEGIHQEKFELISFCSKPR-KRRQRGHRVNPSLLNVTFLPMDSPSLPNGTDNGT 928
F ++ + + ++FCSK R +RRQR N LNV + +D LP GT+N +
Sbjct: 184 IKFGVLKDDVGNPQLSPLTFCSKNRNQRRQRDDSNNVKKLNVLLMELDLDDLPRGTENDS 243
Query: 927 PLLSNGNHS 901
+++ N S
Sbjct: 244 THVNDDNVS 252
>TAIR9_protein||AT4G16810.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana protein match is:
VRN2 (REDUCED VERNALIZATION RESPONSE 2); transcription factor
(TAIR:AT4G16845.2); Has 141 Blast hits to 141 proteins in 50 species:
Archae - 0; Bacteria - 0; Metazoa - 66; Fungi - 0; Plants - 71; Viruses
- 0; Other Eukaryotes - 4 (source: NCBI BLink). | chr4:9460072-9462253
REVERSE
Length = 301
Score = 154 bits (388), Expect = 2e-037
Identities = 80/135 (59%), Positives = 101/135 (74%), Gaps = 4/135 (2%)
Frame = -3
Query: 762 KLSAERSEARSNLL-LQKRQFYHSHRVQPMSLEQVMSDRDSEDEVD--DDVADLEDRQML 592
K+ A+RS+A S+ L L KRQFYHS QP+SLEQVMSDRDSE++VD DD A LE+ QML
Sbjct: 11 KVPAKRSKATSHYLPLHKRQFYHSRTGQPLSLEQVMSDRDSENDVDKNDDAAHLEESQML 70
Query: 591 DDFVDVNK-NEKRFMHLWNSFVRKQRVVADGHIPWACEAFSKFHKEELLHSSPLFWCWRL 415
+ +D N+ +RF+ LWNSFV++QR+VAD HIPWACEAFS+ H +EL + L CWR
Sbjct: 71 NGSMDENEIVAERFIKLWNSFVKQQRIVADAHIPWACEAFSRLHLQELRSNLSLDLCWRQ 130
Query: 414 FMIKLWNIGLVDSAT 370
FMIK W+ GL+D T
Sbjct: 131 FMIKQWDYGLLDRVT 145
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 729,229,929
Number of Sequences: 33410
Number of Extensions: 729229929
Number of Successful Extensions: 36865265
Number of sequences better than 0.0: 0
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