BLASTX 7.6.2
Query= UN00398 /QuerySize=1093
(1092 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297813917|ref|XP_002874842.1| F-box family protein [Arabidops... 391 2e-106
gi|18412947|ref|NP_567294.1| F-box protein SKIP19 [Arabidopsis t... 366 5e-099
gi|21593361|gb|AAM65310.1| F-box protein family, AtFBL20 [Arabid... 364 1e-098
gi|297813919|ref|XP_002874843.1| hypothetical protein ARALYDRAFT... 339 6e-091
gi|225443980|ref|XP_002274093.1| PREDICTED: hypothetical protein... 329 8e-088
gi|297790738|ref|XP_002863254.1| hypothetical protein ARALYDRAFT... 326 4e-087
gi|297813939|ref|XP_002874853.1| hypothetical protein ARALYDRAFT... 312 6e-083
gi|75336884|sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box... 300 4e-079
gi|255571310|ref|XP_002526604.1| ubiquitin-protein ligase, putat... 291 1e-076
gi|18412951|ref|NP_567296.1| putative F-box/LRR-repeat protein 2... 285 1e-074
gi|15236356|ref|NP_192272.1| root nodule development protein-lik... 233 6e-059
gi|297792171|ref|XP_002863970.1| predicted protein [Arabidopsis ... 217 4e-054
gi|297796061|ref|XP_002865915.1| hypothetical protein ARALYDRAFT... 199 8e-049
gi|297813571|ref|XP_002874669.1| hypothetical protein ARALYDRAFT... 123 7e-026
gi|297813573|ref|XP_002874670.1| predicted protein [Arabidopsis ... 123 7e-026
gi|297789154|ref|XP_002862572.1| predicted protein [Arabidopsis ... 121 2e-025
gi|334186383|ref|NP_567295.2| F-box family protein (FBL21) [Arab... 120 5e-025
>gi|297813917|ref|XP_002874842.1| F-box family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 308
Score = 391 bits (1002), Expect = 2e-106
Identities = 200/306 (65%), Positives = 238/306 (77%), Gaps = 15/306 (4%)
Frame = +3
Query: 9 AMKEGGYANWAELPPELTSSILHRLGAIEIVENVQKVCRSWRRVCKDPSMWREIDMRNLG 188
AM+ G NW ELPPELTS ILHRLGAIEI+EN QKVCRSWRRVCKDPSMWR+IDM NLG
Sbjct: 9 AMEVGESRNWTELPPELTSLILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLG 68
Query: 189 DFGDMYY--EKLCRHAVDLSRGELVEINLCHFATDSLLNYIADSSSNLRTLKVAMCYEIT 362
D DM + + +CRHAVD S+G LVEI++ +F TD LLNYIAD SSNLR+L++ C +IT
Sbjct: 69 DLEDMEFNLDIMCRHAVDRSQGGLVEIDIWYFGTDGLLNYIADRSSNLRSLRLTRCSQIT 128
Query: 363 SEGLMEAVSKLPLLEVLEVSYCSVSGESLKVVGQSCPNLKTLKKNCVGYKRPRDECDDVA 542
+GL+EAV KLPLLE LE+SYCS+SG SLKV+GQSCPN+K LK P+ E DD A
Sbjct: 129 DDGLVEAVLKLPLLEDLELSYCSLSGVSLKVLGQSCPNMKILKLK----SYPQKENDDDA 184
Query: 543 LAVAKTMPGLCHLQLFGDRLTDAGLNAILDGCLNLEHLDLRQCFNVNLVGDLEKRCLERI 722
LA+A+TMP L HLQLFG+ L+D GLNAILD CLNLEHLDLR+CFNVNL+GDL+KRC ER+
Sbjct: 185 LAIAETMPKLRHLQLFGNGLSDTGLNAILDSCLNLEHLDLRRCFNVNLIGDLQKRCSERV 244
Query: 723 KVVRRPNDSVHDYPFDATVNDVCSSDDEELYGLSDVDIMSEDEFY--YDDLSDASDNSDF 896
KVVR PNDS HD D+ SS+DE YG SD+D+MS+D + Y DL+ ASD SD+
Sbjct: 245 KVVRHPNDSTHDI-------DIGSSEDEYPYGFSDIDLMSDDTEFDDYYDLTGASDYSDY 297
Query: 897 DPYYYY 914
D + YY
Sbjct: 298 DQFDYY 303
>gi|18412947|ref|NP_567294.1| F-box protein SKIP19 [Arabidopsis thaliana]
Length = 302
Score = 366 bits (938), Expect = 5e-099
Identities = 193/301 (64%), Positives = 228/301 (75%), Gaps = 16/301 (5%)
Frame = +3
Query: 6 AAMKEGGYANWAELPPELTSSILHRLGAIEIVENVQKVCRSWRRVCKDPSMWREIDMRNL 185
AAM+ G NW ELPPELTS+ILHRLGAIEI+EN QKVCRSWRRVCKDPSMWR+IDM NL
Sbjct: 9 AAMEVGESTNWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNL 68
Query: 186 GDFGDMYY--EKLCRHAVDLSRGELVEINLCHFATDSLLNYIADSSSNLRTLKVAMCYEI 359
GD DM Y E +CRHAVD S+G LV+I + +F T LLNYIA SSNLR+L++ C +I
Sbjct: 69 GDLDDMDYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRCSQI 128
Query: 360 TSEGLMEAVSKLPLLEVLEVSYCSVSGESLKVVGQSCPNLKTLKKNCVGYKRPRDECDDV 539
T +G +EAV KLP LE LE+SYCS S ESL+VVGQ C N+KTLK N K P+ E DD
Sbjct: 129 TDDGFVEAVVKLP-LEELELSYCSFSVESLRVVGQCCLNMKTLKLN----KHPQKENDDD 183
Query: 540 ALAVAKTMPGLCHLQLFGDRLTDAGLNAILDGCLNLEHLDLRQCFNVNLVGDLEKRCLER 719
ALA+A+TMP L HLQL G+ L+D GLNAILD C NLEHLDLR+CFNVNLVGDL+KRC E
Sbjct: 184 ALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNVNLVGDLQKRCFES 243
Query: 720 IKVVRRPNDSVHDYPFDATVNDVCSSDDEELYGLSDVDIMSEDEFY--YDDLSDASDNSD 893
+KVVR PNDS+HD D+ SS+DE+ Y SD+D+MS D+ + Y D S ASD SD
Sbjct: 244 VKVVRHPNDSIHDI-------DIGSSEDEDPYDFSDIDLMSGDDDFEGYYDFSGASDFSD 296
Query: 894 F 896
+
Sbjct: 297 Y 297
>gi|21593361|gb|AAM65310.1| F-box protein family, AtFBL20 [Arabidopsis
thaliana]
Length = 302
Score = 364 bits (934), Expect = 1e-098
Identities = 192/301 (63%), Positives = 228/301 (75%), Gaps = 16/301 (5%)
Frame = +3
Query: 6 AAMKEGGYANWAELPPELTSSILHRLGAIEIVENVQKVCRSWRRVCKDPSMWREIDMRNL 185
AAM+ G NW ELPPELTS+ILHRLGAIEI+EN QKVCRSWRRVCKDPSMWR+IDM NL
Sbjct: 9 AAMEVGESTNWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNL 68
Query: 186 GDFGDMYY--EKLCRHAVDLSRGELVEINLCHFATDSLLNYIADSSSNLRTLKVAMCYEI 359
GD DM Y E +CRHAVD S+G LV+I + +F T LLNYIA SSNLR+L++ C +I
Sbjct: 69 GDLDDMDYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRCSQI 128
Query: 360 TSEGLMEAVSKLPLLEVLEVSYCSVSGESLKVVGQSCPNLKTLKKNCVGYKRPRDECDDV 539
T +G +EAV KLP LE LE+SYCS S ESL+VVGQ C N+KTLK N K P+ E DD
Sbjct: 129 TDDGFVEAVVKLP-LEELELSYCSFSVESLRVVGQCCLNMKTLKLN----KHPQKENDDD 183
Query: 540 ALAVAKTMPGLCHLQLFGDRLTDAGLNAILDGCLNLEHLDLRQCFNVNLVGDLEKRCLER 719
ALA+A+T+P L HLQL G+ L+D GLNAILD C NLEHLDLR+CFNVNLVGDL+KRC E
Sbjct: 184 ALAIAETIPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNVNLVGDLQKRCFES 243
Query: 720 IKVVRRPNDSVHDYPFDATVNDVCSSDDEELYGLSDVDIMSEDEFY--YDDLSDASDNSD 893
+KVVR PNDS+HD D+ SS+DE+ Y SD+D+MS D+ + Y D S ASD SD
Sbjct: 244 VKVVRHPNDSIHDI-------DIGSSEDEDPYDFSDIDLMSGDDDFEGYYDFSGASDFSD 296
Query: 894 F 896
+
Sbjct: 297 Y 297
>gi|297813919|ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810
[Arabidopsis lyrata subsp. lyrata]
Length = 610
Score = 339 bits (868), Expect = 6e-091
Identities = 173/266 (65%), Positives = 209/266 (78%), Gaps = 4/266 (1%)
Frame = +3
Query: 3 TAAMKEGGYANWAELPPELTSSILHRLGAIEIVENVQKVCRSWRRVCKDPSMWREIDMRN 182
++ +K+ NWAELPPELTSSIL RLG I+I+EN QKVCRSWRRVCKDPSMWR+IDM N
Sbjct: 336 SSLVKDEEVRNWAELPPELTSSILGRLGTIDILENAQKVCRSWRRVCKDPSMWRKIDMDN 395
Query: 183 LGDFGDMYY--EKLCRHAVDLSRGELVEINLCHFATDSLLNYIADSSSNLRTLKVAMCYE 356
LGD G M Y E +CRHAVD S+G LVEI++ +F TD LLNYIAD SSNLRTL++ MCY
Sbjct: 396 LGDLGAMGYDLEIMCRHAVDRSQGGLVEIDIWYFGTDELLNYIADRSSNLRTLRLIMCYP 455
Query: 357 ITSEGLMEAVSKLPLLEVLEVSYCSVSGESLKVVGQSCPNLKTLKKNCVGYKRPRDE--C 530
I EG +EAV KLPL+E LE+S+CS+SGESLKVVGQSCPNLKTLK N + D+
Sbjct: 456 IADEGFIEAVVKLPLIEYLELSHCSLSGESLKVVGQSCPNLKTLKLNSEPDPKFNDDEFN 515
Query: 531 DDVALAVAKTMPGLCHLQLFGDRLTDAGLNAILDGCLNLEHLDLRQCFNVNLVGDLEKRC 710
++ ALA+A++MP L HLQLFG+ LT+ GLNAILDGC +LEHLDLR+C NV+L GDLEKRC
Sbjct: 516 NEEALAIAESMPELRHLQLFGNILTNVGLNAILDGCPHLEHLDLRKCSNVDLTGDLEKRC 575
Query: 711 LERIKVVRRPNDSVHDYPFDATVNDV 788
+ERIK ++RP DS +P+ DV
Sbjct: 576 VERIKDLKRPTDSTAGHPYGRITVDV 601
>gi|225443980|ref|XP_002274093.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 321
Score = 329 bits (841), Expect = 8e-088
Identities = 158/295 (53%), Positives = 215/295 (72%), Gaps = 4/295 (1%)
Frame = +3
Query: 33 NWAELPPELTSSILHRLGAIEIVENVQKVCRSWRRVCKDPSMWREIDMRNLGDFGDMYY- 209
NW ELP ++TS IL +L A+EI+ + Q VC WR++C++P MWR IDM NLGD D+ Y
Sbjct: 19 NWQELPRDVTSMILSKLNAVEILSSAQFVCSFWRKLCREPMMWRNIDMHNLGDLCDLGYD 78
Query: 210 -EKLCRHAVDLSRGELVEINLCHFATDSLLNYIADSSSNLRTLKVAMCYEITSEGLMEAV 386
E++ RHAVD S G+L+ I + FATD+LLNYI D SS++R L++ CY I+ +GL E +
Sbjct: 79 LEEMARHAVDRSGGQLLSICIDDFATDNLLNYIIDRSSHIRHLRLVSCYGISDDGLSEGI 138
Query: 387 SKLPLLEVLEVSYCSVSGESLKVVGQSCPNLKTLKKNCVGYKRPRDECDDVALAVAKTMP 566
+LPLL +++ YCS S E L+ +GQ CP LK+ + NC G++ P ECD+ ALA+A+ MP
Sbjct: 139 KRLPLLVEIDLCYCSFSKEVLEAIGQCCPRLKSFRLNCQGFRHPHIECDEEALAIAQNMP 198
Query: 567 GLCHLQLFGDRLTDAGLNAILDGCLNLEHLDLRQCFNVNLVGDLEKRCLERIKVVRRPND 746
GL LQLFG++LT+ GL AILDGC +LE LDLRQCFNVNL G+L KRC E+IK++R PND
Sbjct: 199 GLKSLQLFGNKLTNNGLLAILDGCCHLESLDLRQCFNVNLGGNLAKRCAEQIKILRYPND 258
Query: 747 SVHDYPFDATVNDVCSSDDEELYGLSDVDIMSEDEFYYDDLSDASDNSDFDPYYY 911
S DY FDA ++D S D+E G+SD+D++S+ ++Y D SD SD S++DP Y
Sbjct: 259 STDDYEFDAEIHDDASFDEEYPSGISDLDLLSDGDYY--DFSDGSDFSEYDPSDY 311
>gi|297790738|ref|XP_002863254.1| hypothetical protein ARALYDRAFT_332995
[Arabidopsis lyrata subsp. lyrata]
Length = 296
Score = 326 bits (835), Expect = 4e-087
Identities = 173/292 (59%), Positives = 211/292 (72%), Gaps = 18/292 (6%)
Frame = +3
Query: 12 MKEGGYANWAELPPELTSSILHRLGAIEIVENVQKVCRSWRRVCKDPSMWREIDMRNLGD 191
MK+ NWAELP ELT SIL+RLGAI+I+EN QKVC SWRRV DP MWR+IDM LGD
Sbjct: 10 MKDEEPRNWAELPSELTFSILNRLGAIDILENAQKVCTSWRRVSLDPLMWRKIDMHYLGD 69
Query: 192 FGDMYY--EKLCRHAVDLSRGELVEINLCHFATDSLLNYIADSSSNLRTLKVAMCYEITS 365
G M Y E +CRHAVD S+G LVEI++ HF TD LLNYIAD SSNLR+L++AMC +IT
Sbjct: 70 MGSMIYDFESMCRHAVDRSQGGLVEIDIWHFGTDDLLNYIADRSSNLRSLRLAMCNQITD 129
Query: 366 EGLMEAVSKLPLLEVLEVSYCSVSGESLKVVGQSCPNLKTLKKNCVGYKRPRDEC----- 530
EG+ EAV KLPLLE L+VS+C+ GESL+VVGQSCPNLKTLK N + P +C
Sbjct: 130 EGVTEAVVKLPLLEDLDVSFCAFLGESLRVVGQSCPNLKTLKLN----RSPGIDCFLFRP 185
Query: 531 DDVALAVAKTMPGLCHLQLFGDRLTDAGLNAILDGCLNLEHLDLRQCFNVNLVGDLEKRC 710
+ A+ +A++MP L H+QLFG+ + + GLNAILDGC ++EHLDLR+CFN+NLV D+EKRC
Sbjct: 186 NINAIVIAESMPNLRHIQLFGNEINNTGLNAILDGCPHVEHLDLRKCFNINLVEDIEKRC 245
Query: 711 LERIKVVRRPNDSVHDYPFDATVNDVCSSDDEELYGLSDVDIMSEDEFYYDD 866
ERI+V+RRP DS D+ FD C SD SD D D+ Y DD
Sbjct: 246 SERIRVLRRPYDSTADFLFDNIWFLECYSD-------SDSDDADRDDDYDDD 290
>gi|297813939|ref|XP_002874853.1| hypothetical protein ARALYDRAFT_911822
[Arabidopsis lyrata subsp. lyrata]
Length = 300
Score = 312 bits (799), Expect = 6e-083
Identities = 163/275 (59%), Positives = 202/275 (73%), Gaps = 5/275 (1%)
Frame = +3
Query: 12 MKEGGYANWAELPPELTSSILHRLGAIEIVENVQKVCRSWRRVCKDPSMWREIDMRNLGD 191
+KEG NWAE+PPELTSSIL L IEI++N Q+VCRSWRRVCKDPSMWR+IDMRN G
Sbjct: 25 LKEGESQNWAEIPPELTSSILLHLSTIEILKNAQRVCRSWRRVCKDPSMWRKIDMRNNGI 84
Query: 192 FGDMYYEKLCRHAVDLSRGELVEINLCHFATDSLLNYIADSSSNLRTLKVAMCYEITSEG 371
FG Y+++CRHAVDLS G LVEIN+ HF DSL +YIA+ SSNLR L++AMCY +T +G
Sbjct: 85 FG-YDYDRMCRHAVDLSEGGLVEINMVHFGNDSLYSYIAERSSNLRCLRLAMCYPLTGKG 143
Query: 372 LMEAVSKLPLLEVLEVSYCSVSGESLKVVGQSCPNLKTLKKNCVGYKRPRDECDDVALAV 551
+ AV +L LE LE+S+ + LK +GQSC LKT K N + R + DD ALA+
Sbjct: 144 FVSAVMQLSFLEELEISH-GYAQLDLKAIGQSCTLLKTFKLNRPSFSR-YVKYDDEALAI 201
Query: 552 AKTMPGLCHLQLFGDRLTDAGLNAILDGCLNLEHLDLRQCFNVNLVGDLEKRCLERIKVV 731
A+TMPGL +L+LFG+ LT++GL AILD CL+LEHLDLR+CFN+ LVGDLEKRC E + +
Sbjct: 202 AETMPGLRYLELFGNGLTNSGLEAILDNCLHLEHLDLRRCFNIYLVGDLEKRCSESFRDL 261
Query: 732 RRPNDSVHDYPFDATVNDVCSSDDEELYGLSDVDI 836
RRP DS D PFDAT V S+ E+ Y D D+
Sbjct: 262 RRPEDSTADSPFDAT--SVIISEGEDNYFSDDSDL 294
>gi|75336884|sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box/LRR-repeat
protein 23
Length = 449
Score = 300 bits (766), Expect = 4e-079
Identities = 154/252 (61%), Positives = 187/252 (74%), Gaps = 3/252 (1%)
Frame = +3
Query: 12 MKEGGYANWAELPPELTSSILHRLGAIEIVENVQKVCRSWRRVCKDPSMWREIDMRNLGD 191
MK+ NWAELP +LTSSIL RLGAIEI++N QKVC+ W RVCKDPSMWR+ID+ N D
Sbjct: 173 MKDKKLRNWAELPSKLTSSILLRLGAIEILQNAQKVCKPWHRVCKDPSMWRKIDIDNRND 232
Query: 192 FGDMYY--EKLCRHAVDLSRGELVEINLCHFATDSLLNYIADSSSNLRTLKVAMCYEITS 365
Y E +CRHAVD S G L+EI + ++ T+ L+ YIAD SSNL++L + C+ IT
Sbjct: 233 RAAFKYDLESMCRHAVDRSHGGLIEIEIWYYGTNDLIMYIADRSSNLKSLGLVRCFPITD 292
Query: 366 EGLMEAVSKLPLLEVLEVSYCSVSGESLKVVGQSCPNLKTLKKN-CVGYKRPRDECDDVA 542
EG+ +AVSK+PLLE LEVSYC SGESL+ +G+SCPNLKTLK N DD A
Sbjct: 293 EGVAKAVSKVPLLEYLEVSYCLFSGESLRDIGRSCPNLKTLKLNRAPEIMFSNSGFDDNA 352
Query: 543 LAVAKTMPGLCHLQLFGDRLTDAGLNAILDGCLNLEHLDLRQCFNVNLVGDLEKRCLERI 722
A+A++MP L HLQL G+ LT+ GLNAILDGC +LEHLDLRQCFN+NLVGDL+KRC ERI
Sbjct: 353 KAIAESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQCFNINLVGDLKKRCFERI 412
Query: 723 KVVRRPNDSVHD 758
K +R PNDS D
Sbjct: 413 KDLRCPNDSDDD 424
Score = 117 bits (292), Expect = 4e-024
Identities = 58/108 (53%), Positives = 77/108 (71%)
Frame = +3
Query: 531 DDVALAVAKTMPGLCHLQLFGDRLTDAGLNAILDGCLNLEHLDLRQCFNVNLVGDLEKRC 710
DD LA+A+TMP L HL+LFG+ LT+ L AILD C++L HLDLR+CFN+NL+GDLEKRC
Sbjct: 19 DDEPLAIAETMPELRHLKLFGNGLTNLRLEAILDNCVHLVHLDLRRCFNINLLGDLEKRC 78
Query: 711 LERIKVVRRPNDSVHDYPFDATVNDVCSSDDEELYGLSDVDIMSEDEF 854
ERI+ +RRP+DS D PFDA+ + + +D+ + D D D F
Sbjct: 79 SERIRDLRRPDDSTADSPFDASSDIYSAGEDDYDFYSDDSDGTLSDHF 126
>gi|255571310|ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus
communis]
Length = 305
Score = 291 bits (744), Expect = 1e-076
Identities = 145/294 (49%), Positives = 206/294 (70%), Gaps = 2/294 (0%)
Frame = +3
Query: 12 MKEGGYANWAELPPELTSSILHRLGAIEIVENVQKVCRSWRRVCKDPSMWREIDMRNLGD 191
++E Y NWAELP ++T+ IL ++GA +I+ + Q VC SW VCKDPSMWR +++ L D
Sbjct: 11 LQEDSYRNWAELPRDVTALILDKVGAFDILGSAQFVCSSWNSVCKDPSMWRSVEIHPLCD 70
Query: 192 FGDMYY--EKLCRHAVDLSRGELVEINLCHFATDSLLNYIADSSSNLRTLKVAMCYEITS 365
F D+ + E LCR+AVD SRG L+ I++ +FATDSL+ YIAD SS+L+ L++ Y ++
Sbjct: 71 FWDLPFDLEALCRNAVDRSRGGLISISIEYFATDSLIKYIADRSSHLKRLRLLSSYTLSD 130
Query: 366 EGLMEAVSKLPLLEVLEVSYCSVSGESLKVVGQSCPNLKTLKKNCVGYKRPRDECDDVAL 545
+A K PLLE L++SYCS+S E+L VG SCP L++LK NC GYKRP E ++ AL
Sbjct: 131 AAFSKAAKKFPLLEELDISYCSLSTEALVGVGISCPLLRSLKLNCQGYKRPHIESNEEAL 190
Query: 546 AVAKTMPGLCHLQLFGDRLTDAGLNAILDGCLNLEHLDLRQCFNVNLVGDLEKRCLERIK 725
A+ + MP L +LQ+FG++LT+ G+ AILDGC +LE LDLRQCFNV+L G+L C ERIK
Sbjct: 191 AIGQWMPHLRYLQIFGNKLTNDGVQAILDGCPHLEFLDLRQCFNVHLEGELGMLCGERIK 250
Query: 726 VVRRPNDSVHDYPFDATVNDVCSSDDEELYGLSDVDIMSEDEFYYDDLSDASDN 887
+RRP+D DYPF+ + D SS+++ G SD++ ++D+ Y SD ++
Sbjct: 251 DLRRPDDPTDDYPFNPEIPDYGSSEEDYPSGFSDMEFATDDDDDYYAFSDGIED 304
>gi|18412951|ref|NP_567296.1| putative F-box/LRR-repeat protein 22 [Arabidopsis
thaliana]
Length = 307
Score = 285 bits (727), Expect = 1e-074
Identities = 156/277 (56%), Positives = 194/277 (70%), Gaps = 12/277 (4%)
Frame = +3
Query: 30 ANWAELPPELTSSILHRLGAIEIVENVQKVCRSWRRVCKDPSMWREIDMRNLGDFGDMY- 206
+NWAELPP+L SSIL RL +EI+EN +KVCRSWRRV KDP +WR IDMRNL +Y
Sbjct: 25 SNWAELPPDLLSSILLRLSPLEILENARKVCRSWRRVSKDPLIWRRIDMRNLRRLYCIYA 84
Query: 207 YEKLCRHAVDLSRGELVEINL--CHFATDSLLNYIADSSSNLRTLKVAMCYEITSEGLME 380
E CRH VDLS+G L+E N+ F T SLLNY+A+ SSNLR L+V +ITS G+ E
Sbjct: 85 MEACCRHVVDLSQGGLLEFNIDQWRFQTTSLLNYMAERSSNLRRLRV-KGGQITSVGIFE 143
Query: 381 AVSKLPLLEVLEVSYCSVSGESLKVVGQSCPNLKTLKKNCVGYKRPRDECDDVALAVAKT 560
A+ KLPLLE LE+ YCS+ E K +GQ+CPNLKTLK VG+ +E D+ ALA+A T
Sbjct: 144 AIVKLPLLEELELLYCSIEEEHFKTIGQACPNLKTLK--LVGFWSHLNESDNDALAIADT 201
Query: 561 MPGLCHLQLFGDRLTDAGLNAILDGCLNLEHLDLRQCFNVNLVGDLEKRCLERIKVVRRP 740
MPGL HLQL + LT+ GLNAILDGC +LE LDLRQCFN+NL GDLE++CLERIK R P
Sbjct: 202 MPGLLHLQLISNGLTNIGLNAILDGCPHLECLDLRQCFNINLFGDLERQCLERIKDFRCP 261
Query: 741 NDSVHDYPF-----DATVNDVCSSDDEEL-YGLSDVD 833
ND + DY + + ++ D ++E YG D +
Sbjct: 262 NDVLDDYNYVIFSDNGSIEDEKGEEEENYSYGSDDTE 298
>gi|15236356|ref|NP_192272.1| root nodule development protein-like protein
[Arabidopsis thaliana]
Length = 220
Score = 233 bits (592), Expect = 6e-059
Identities = 117/188 (62%), Positives = 142/188 (75%)
Frame = +3
Query: 225 HAVDLSRGELVEINLCHFATDSLLNYIADSSSNLRTLKVAMCYEITSEGLMEAVSKLPLL 404
HAV LS+G VEIN+ HF TDSLL YIAD SSNLR L +A C +IT GL KLPLL
Sbjct: 31 HAVALSQGGCVEINIEHFGTDSLLTYIADRSSNLRHLGLAKCDQITGMGLFTEAMKLPLL 90
Query: 405 EVLEVSYCSVSGESLKVVGQSCPNLKTLKKNCVGYKRPRDECDDVALAVAKTMPGLCHLQ 584
E LE+SYC + G++L+ +G +C +LKTLK NC G+K P D AL +AK MP L LQ
Sbjct: 91 EDLELSYCLIKGKNLEAIGFACLHLKTLKLNCQGFKFPGFTYDHDALGIAKRMPELRCLQ 150
Query: 585 LFGDRLTDAGLNAILDGCLNLEHLDLRQCFNVNLVGDLEKRCLERIKVVRRPNDSVHDYP 764
LFG+R++D GLNAI DGC +LEHLDLRQCFN+NLVGDLEKRC+ERIK +RRPNDS DYP
Sbjct: 151 LFGNRVSDVGLNAIFDGCPHLEHLDLRQCFNINLVGDLEKRCMERIKDLRRPNDSTADYP 210
Query: 765 FDATVNDV 788
+D ++ D+
Sbjct: 211 YDTSLLDL 218
>gi|297792171|ref|XP_002863970.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 326
Score = 217 bits (551), Expect = 4e-054
Identities = 126/260 (48%), Positives = 174/260 (66%), Gaps = 14/260 (5%)
Frame = +3
Query: 135 RVCKDPSMWREIDMRNLGDFGDMYYEKLCRHAVDLSRGELVEINLCHFATDSLLNYIADS 314
R+ K+ +W+++ R++ D + +CRHAVDLSRG L+EI + F +DSLL YIAD
Sbjct: 57 RIPKNFDVWKDM-CRHVFDL-----DAMCRHAVDLSRGGLLEIYIEFFGSDSLLTYIADR 110
Query: 315 SSNLRTLKVAMCYEITSEGLMEAVSKLPLLEVLEVSYCSVSGESLKVVGQSCPNLKTLKK 494
SS LR L ITS G+ +A KLPLLE LEV+ +SG+ LKVVG+SCP L+TL
Sbjct: 111 SSKLRRLGAIDGGIITSFGIFKAAVKLPLLEELEVTDSFISGDHLKVVGKSCPKLRTLMI 170
Query: 495 NCVGYKRPRD-ECDD-VALAVAKTMPGLCHLQLFGDRLTDAGLNAILDGCLNLEHLDLRQ 668
+ R R +CDD +ALA+A+TMPGL HLQL + L+DAGLN+ILD C LEHLD+RQ
Sbjct: 171 RQLKLNRSRYLDCDDEIALAIAETMPGLRHLQLLRNGLSDAGLNSILDNCPKLEHLDIRQ 230
Query: 669 CFNVNLVGDLEKRCLERIKVVRRPNDSVHDYPFDATVNDVCSSDDEELYGLSDVDIMSED 848
CFNVNLVGD +K+C +RIKV+R PNDS+H+Y + V S+ ++E++ DV+ ++D
Sbjct: 231 CFNVNLVGDWKKQCYDRIKVLRHPNDSIHEY------DAVNSNTEDEVHEYDDVNSDTDD 284
Query: 849 EFYYDDLSDASDNSDFDPYY 908
+ ++ D S +D Y
Sbjct: 285 KEDEEEGYDYSYEEGYDYSY 304
>gi|297796061|ref|XP_002865915.1| hypothetical protein ARALYDRAFT_331617
[Arabidopsis lyrata subsp. lyrata]
Length = 206
Score = 199 bits (505), Expect = 8e-049
Identities = 107/186 (57%), Positives = 135/186 (72%), Gaps = 6/186 (3%)
Frame = +3
Query: 210 EKLCRHAVDLSRGELVEINLCHFATDSLLNYIADSSSNLRTLKVAMCYEITSEGLMEAVS 389
E +CRHAVD S+G L+EIN+ F +DSLL YIA+ SSNL++L +AMC EIT EG ++AV
Sbjct: 6 EAICRHAVDRSQGGLLEINIGDFGSDSLLTYIAERSSNLKSLGLAMCSEITEEGFVQAVV 65
Query: 390 KLPLLEVLEVSYCSVSGESLKVVGQSCPNLKTLKKNCVGYKRPRDECDDVALAVAKTMPG 569
KLP+LE LEVS +SGESLK+ G SCPNLK+LK N + Y D+ + A+A+A++MP
Sbjct: 66 KLPMLEELEVSGMLLSGESLKLAGLSCPNLKSLKLNRLFYLNSSDDVN--AIAIAESMPK 123
Query: 570 LCHLQLFGDRLTDAGLNAILDGCLNLEHLDLRQCFNVNLVGDLEKRCLERIKVVRRPNDS 749
L HLQL G+ LT GLNAILD C ++EHLDLRQCFN+ L G+L K R K +R NDS
Sbjct: 124 LRHLQLCGETLTKTGLNAILDSCPHMEHLDLRQCFNLKLAGNLAK----RFKDLRLSNDS 179
Query: 750 VHDYPF 767
D PF
Sbjct: 180 TSDDPF 185
>gi|297813571|ref|XP_002874669.1| hypothetical protein ARALYDRAFT_911420
[Arabidopsis lyrata subsp. lyrata]
Length = 305
Score = 123 bits (307), Expect = 7e-026
Identities = 59/94 (62%), Positives = 74/94 (78%)
Frame = +3
Query: 501 VGYKRPRDECDDVALAVAKTMPGLCHLQLFGDRLTDAGLNAILDGCLNLEHLDLRQCFNV 680
+G P ECDD ALA+A++MP L HLQL G+ LT+ GLN ILD C +LEHLD+R+CFN+
Sbjct: 193 LGDMPPLVECDDDALAIAESMPKLRHLQLMGNGLTNTGLNVILDRCPHLEHLDVRKCFNM 252
Query: 681 NLVGDLEKRCLERIKVVRRPNDSVHDYPFDATVN 782
NLVG+LEKRCLERIK +RRP DS DYP++ V+
Sbjct: 253 NLVGNLEKRCLERIKELRRPGDSTADYPYNIGVS 286
>gi|297813573|ref|XP_002874670.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 483
Score = 123 bits (307), Expect = 7e-026
Identities = 59/94 (62%), Positives = 74/94 (78%)
Frame = +3
Query: 501 VGYKRPRDECDDVALAVAKTMPGLCHLQLFGDRLTDAGLNAILDGCLNLEHLDLRQCFNV 680
+G P ECDD ALA+A++MP L HLQL G+ LT+ GLN ILD C +LEHLD+R+CFN+
Sbjct: 63 LGDMPPLVECDDDALAIAESMPKLRHLQLMGNGLTNTGLNVILDRCPHLEHLDVRKCFNM 122
Query: 681 NLVGDLEKRCLERIKVVRRPNDSVHDYPFDATVN 782
NLVG+LEKRCLERIK +RRP DS DYP++ V+
Sbjct: 123 NLVGNLEKRCLERIKELRRPGDSTADYPYNIGVS 156
>gi|297789154|ref|XP_002862572.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 304
Score = 121 bits (303), Expect = 2e-025
Identities = 61/127 (48%), Positives = 86/127 (67%)
Frame = +3
Query: 402 LEVLEVSYCSVSGESLKVVGQSCPNLKTLKKNCVGYKRPRDECDDVALAVAKTMPGLCHL 581
L++ + + ++LK+ CP + + + + P ECDD ALA+A++MP L HL
Sbjct: 158 LDLKAIGHACPHLKTLKLNFSGCPGHEIYLISQLDFIPPPVECDDDALAIAESMPKLRHL 217
Query: 582 QLFGDRLTDAGLNAILDGCLNLEHLDLRQCFNVNLVGDLEKRCLERIKVVRRPNDSVHDY 761
QL + LT+ GLN ILDGC +LE LD+R+CFN+ LVG+LEKRCLERIK +RRP DS DY
Sbjct: 218 QLIWNGLTNTGLNVILDGCPHLEDLDVRKCFNIKLVGNLEKRCLERIKELRRPGDSTADY 277
Query: 762 PFDATVN 782
P++ V+
Sbjct: 278 PYNIGVS 284
>gi|334186383|ref|NP_567295.2| F-box family protein (FBL21) [Arabidopsis
thaliana]
Length = 304
Score = 120 bits (300), Expect = 5e-025
Identities = 55/82 (67%), Positives = 69/82 (84%)
Frame = +3
Query: 525 ECDDVALAVAKTMPGLCHLQLFGDRLTDAGLNAILDGCLNLEHLDLRQCFNVNLVGDLEK 704
ECDD ALA+A++MP L HLQL +RLT+ GLNAILDGC +LEHLD+R+CF ++LVG+LEK
Sbjct: 221 ECDDDALAIAESMPKLHHLQLMANRLTNTGLNAILDGCPHLEHLDVRKCFRISLVGNLEK 280
Query: 705 RCLERIKVVRRPNDSVHDYPFD 770
RCLE IK +RRP DS DYP++
Sbjct: 281 RCLEMIKELRRPGDSTADYPYN 302
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,432,053,104
Number of Sequences: 15229318
Number of Extensions: 57432053104
Number of Successful Extensions: 34504562
Number of sequences better than 0.0: 0
|
