BLASTX 7.6.2
Query= UN00453 /QuerySize=1059
(1058 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G20380.2 | Symbols: LSD1 | zinc finger protein... 273 2e-073
TAIR9_protein||AT4G20380.1 | Symbols: LSD1 | zinc finger protein... 271 6e-073
TAIR9_protein||AT4G20380.7 | Symbols: LSD1 | zinc finger protein... 267 1e-071
TAIR9_protein||AT4G20380.3 | Symbols: LSD1 | zinc finger protein... 265 6e-071
TAIR9_protein||AT4G20380.4 | Symbols: LSD1 | zinc finger protein... 265 6e-071
TAIR9_protein||AT4G20380.5 | Symbols: LSD1 | zinc finger protein... 265 6e-071
TAIR9_protein||AT4G20380.6 | Symbols: LSD1 | zinc finger protein... 265 6e-071
TAIR9_protein||AT4G20380.8 | Symbols: | zinc finger protein (LS... 124 9e-029
>TAIR9_protein||AT4G20380.2 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005012-11006438 FORWARD
Length = 190
Score = 273 bits (697), Expect = 2e-073
Identities = 139/205 (67%), Positives = 152/205 (74%), Gaps = 22/205 (10%)
Frame = +3
Query: 192 KKGEMQDQLVCHGCRNTLVYPRGATNVRCALCNTINMVPLHPHPPPPPHHHAHVGMDMAH 371
K +MQDQLVCHGCRN L+YPRGA+NVRCALCNTINMVP PPPPPH DMAH
Sbjct: 2 KVADMQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP----PPPPPH-------DMAH 50
Query: 372 IVCGGCRTMLMYTRGANSVRCSCCQTVNLVP------ATPPTNQPAHISCGNCRTTLMYP 533
I+CGGCRTMLMYTRGA+SVRCSCCQT NLVP A P++Q A I+CG+CRTTLMYP
Sbjct: 51 IICGGCRTMLMYTRGASSVRCSCCQTTNLVPAHSNQVAHAPSSQVAQINCGHCRTTLMYP 110
Query: 534 YGAPSVRCAVCQFATNVNMGNGRVPFLTNLPNGTAASPGSCPLYIHSVNTTVSDPNRRRR 713
YGA SV+CAVCQF TNVNM NGRVP TN PNGTA P + S TV
Sbjct: 111 YGASSVKCAVCQFVTNVNMSNGRVPLPTNRPNGTACPPSTSTSTPPSQTQTVV-----VE 165
Query: 714 NPMSVNESGKLVGNVVVGMTTDKK* 788
NPMSV+ESGKLV NVVVG+TTDKK*
Sbjct: 166 NPMSVDESGKLVSNVVVGVTTDKK* 190
>TAIR9_protein||AT4G20380.1 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005027-11006438 FORWARD
Length = 185
Score = 271 bits (692), Expect = 6e-073
Identities = 138/201 (68%), Positives = 150/201 (74%), Gaps = 22/201 (10%)
Frame = +3
Query: 204 MQDQLVCHGCRNTLVYPRGATNVRCALCNTINMVPLHPHPPPPPHHHAHVGMDMAHIVCG 383
MQDQLVCHGCRN L+YPRGA+NVRCALCNTINMVP PPPPPH DMAHI+CG
Sbjct: 1 MQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP----PPPPPH-------DMAHIICG 49
Query: 384 GCRTMLMYTRGANSVRCSCCQTVNLVP------ATPPTNQPAHISCGNCRTTLMYPYGAP 545
GCRTMLMYTRGA+SVRCSCCQT NLVP A P++Q A I+CG+CRTTLMYPYGA
Sbjct: 50 GCRTMLMYTRGASSVRCSCCQTTNLVPAHSNQVAHAPSSQVAQINCGHCRTTLMYPYGAS 109
Query: 546 SVRCAVCQFATNVNMGNGRVPFLTNLPNGTAASPGSCPLYIHSVNTTVSDPNRRRRNPMS 725
SV+CAVCQF TNVNM NGRVP TN PNGTA P + S TV NPMS
Sbjct: 110 SVKCAVCQFVTNVNMSNGRVPLPTNRPNGTACPPSTSTSTPPSQTQTVV-----VENPMS 164
Query: 726 VNESGKLVGNVVVGMTTDKK* 788
V+ESGKLV NVVVG+TTDKK*
Sbjct: 165 VDESGKLVSNVVVGVTTDKK* 185
>TAIR9_protein||AT4G20380.7 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005012-11006438 FORWARD
Length = 190
Score = 267 bits (680), Expect = 1e-071
Identities = 136/201 (67%), Positives = 149/201 (74%), Gaps = 22/201 (10%)
Frame = +3
Query: 192 KKGEMQDQLVCHGCRNTLVYPRGATNVRCALCNTINMVPLHPHPPPPPHHHAHVGMDMAH 371
K +MQDQLVCHGCRN L+YPRGA+NVRCALCNTINMVP PPPPPH DMAH
Sbjct: 2 KVADMQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP----PPPPPH-------DMAH 50
Query: 372 IVCGGCRTMLMYTRGANSVRCSCCQTVNLVP------ATPPTNQPAHISCGNCRTTLMYP 533
I+CGGCRTMLMYTRGA+SVRCSCCQT NLVP A P++Q A I+CG+CRTTLMYP
Sbjct: 51 IICGGCRTMLMYTRGASSVRCSCCQTTNLVPAHSNQVAHAPSSQVAQINCGHCRTTLMYP 110
Query: 534 YGAPSVRCAVCQFATNVNMGNGRVPFLTNLPNGTAASPGSCPLYIHSVNTTVSDPNRRRR 713
YGA SV+CAVCQF TNVNM NGRVP TN PNGTA P + S TV
Sbjct: 111 YGASSVKCAVCQFVTNVNMSNGRVPLPTNRPNGTACPPSTSTSTPPSQTQTVV-----VE 165
Query: 714 NPMSVNESGKLVGNVVVGMTT 776
NPMSV+ESGKLV NVVVG+TT
Sbjct: 166 NPMSVDESGKLVSNVVVGVTT 186
>TAIR9_protein||AT4G20380.3 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005027-11006438 FORWARD
Length = 185
Score = 265 bits (675), Expect = 6e-071
Identities = 135/197 (68%), Positives = 147/197 (74%), Gaps = 22/197 (11%)
Frame = +3
Query: 204 MQDQLVCHGCRNTLVYPRGATNVRCALCNTINMVPLHPHPPPPPHHHAHVGMDMAHIVCG 383
MQDQLVCHGCRN L+YPRGA+NVRCALCNTINMVP PPPPPH DMAHI+CG
Sbjct: 1 MQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP----PPPPPH-------DMAHIICG 49
Query: 384 GCRTMLMYTRGANSVRCSCCQTVNLVP------ATPPTNQPAHISCGNCRTTLMYPYGAP 545
GCRTMLMYTRGA+SVRCSCCQT NLVP A P++Q A I+CG+CRTTLMYPYGA
Sbjct: 50 GCRTMLMYTRGASSVRCSCCQTTNLVPAHSNQVAHAPSSQVAQINCGHCRTTLMYPYGAS 109
Query: 546 SVRCAVCQFATNVNMGNGRVPFLTNLPNGTAASPGSCPLYIHSVNTTVSDPNRRRRNPMS 725
SV+CAVCQF TNVNM NGRVP TN PNGTA P + S TV NPMS
Sbjct: 110 SVKCAVCQFVTNVNMSNGRVPLPTNRPNGTACPPSTSTSTPPSQTQTVV-----VENPMS 164
Query: 726 VNESGKLVGNVVVGMTT 776
V+ESGKLV NVVVG+TT
Sbjct: 165 VDESGKLVSNVVVGVTT 181
>TAIR9_protein||AT4G20380.4 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005027-11006438 FORWARD
Length = 185
Score = 265 bits (675), Expect = 6e-071
Identities = 135/197 (68%), Positives = 147/197 (74%), Gaps = 22/197 (11%)
Frame = +3
Query: 204 MQDQLVCHGCRNTLVYPRGATNVRCALCNTINMVPLHPHPPPPPHHHAHVGMDMAHIVCG 383
MQDQLVCHGCRN L+YPRGA+NVRCALCNTINMVP PPPPPH DMAHI+CG
Sbjct: 1 MQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP----PPPPPH-------DMAHIICG 49
Query: 384 GCRTMLMYTRGANSVRCSCCQTVNLVP------ATPPTNQPAHISCGNCRTTLMYPYGAP 545
GCRTMLMYTRGA+SVRCSCCQT NLVP A P++Q A I+CG+CRTTLMYPYGA
Sbjct: 50 GCRTMLMYTRGASSVRCSCCQTTNLVPAHSNQVAHAPSSQVAQINCGHCRTTLMYPYGAS 109
Query: 546 SVRCAVCQFATNVNMGNGRVPFLTNLPNGTAASPGSCPLYIHSVNTTVSDPNRRRRNPMS 725
SV+CAVCQF TNVNM NGRVP TN PNGTA P + S TV NPMS
Sbjct: 110 SVKCAVCQFVTNVNMSNGRVPLPTNRPNGTACPPSTSTSTPPSQTQTVV-----VENPMS 164
Query: 726 VNESGKLVGNVVVGMTT 776
V+ESGKLV NVVVG+TT
Sbjct: 165 VDESGKLVSNVVVGVTT 181
>TAIR9_protein||AT4G20380.5 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005027-11006438 FORWARD
Length = 185
Score = 265 bits (675), Expect = 6e-071
Identities = 135/197 (68%), Positives = 147/197 (74%), Gaps = 22/197 (11%)
Frame = +3
Query: 204 MQDQLVCHGCRNTLVYPRGATNVRCALCNTINMVPLHPHPPPPPHHHAHVGMDMAHIVCG 383
MQDQLVCHGCRN L+YPRGA+NVRCALCNTINMVP PPPPPH DMAHI+CG
Sbjct: 1 MQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP----PPPPPH-------DMAHIICG 49
Query: 384 GCRTMLMYTRGANSVRCSCCQTVNLVP------ATPPTNQPAHISCGNCRTTLMYPYGAP 545
GCRTMLMYTRGA+SVRCSCCQT NLVP A P++Q A I+CG+CRTTLMYPYGA
Sbjct: 50 GCRTMLMYTRGASSVRCSCCQTTNLVPAHSNQVAHAPSSQVAQINCGHCRTTLMYPYGAS 109
Query: 546 SVRCAVCQFATNVNMGNGRVPFLTNLPNGTAASPGSCPLYIHSVNTTVSDPNRRRRNPMS 725
SV+CAVCQF TNVNM NGRVP TN PNGTA P + S TV NPMS
Sbjct: 110 SVKCAVCQFVTNVNMSNGRVPLPTNRPNGTACPPSTSTSTPPSQTQTVV-----VENPMS 164
Query: 726 VNESGKLVGNVVVGMTT 776
V+ESGKLV NVVVG+TT
Sbjct: 165 VDESGKLVSNVVVGVTT 181
>TAIR9_protein||AT4G20380.6 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005027-11006438 FORWARD
Length = 185
Score = 265 bits (675), Expect = 6e-071
Identities = 135/197 (68%), Positives = 147/197 (74%), Gaps = 22/197 (11%)
Frame = +3
Query: 204 MQDQLVCHGCRNTLVYPRGATNVRCALCNTINMVPLHPHPPPPPHHHAHVGMDMAHIVCG 383
MQDQLVCHGCRN L+YPRGA+NVRCALCNTINMVP PPPPPH DMAHI+CG
Sbjct: 1 MQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP----PPPPPH-------DMAHIICG 49
Query: 384 GCRTMLMYTRGANSVRCSCCQTVNLVP------ATPPTNQPAHISCGNCRTTLMYPYGAP 545
GCRTMLMYTRGA+SVRCSCCQT NLVP A P++Q A I+CG+CRTTLMYPYGA
Sbjct: 50 GCRTMLMYTRGASSVRCSCCQTTNLVPAHSNQVAHAPSSQVAQINCGHCRTTLMYPYGAS 109
Query: 546 SVRCAVCQFATNVNMGNGRVPFLTNLPNGTAASPGSCPLYIHSVNTTVSDPNRRRRNPMS 725
SV+CAVCQF TNVNM NGRVP TN PNGTA P + S TV NPMS
Sbjct: 110 SVKCAVCQFVTNVNMSNGRVPLPTNRPNGTACPPSTSTSTPPSQTQTVV-----VENPMS 164
Query: 726 VNESGKLVGNVVVGMTT 776
V+ESGKLV NVVVG+TT
Sbjct: 165 VDESGKLVSNVVVGVTT 181
>TAIR9_protein||AT4G20380.8 | Symbols: | zinc finger protein (LSD1) |
chr4:11005027-11006438 FORWARD
Length = 211
Score = 124 bits (311), Expect = 9e-029
Identities = 65/104 (62%), Positives = 73/104 (70%), Gaps = 5/104 (4%)
Frame = +3
Query: 465 ATPPTNQPAHISCGNCRTTLMYPYGAPSVRCAVCQFATNVNMGNGRVPFLTNLPNGTAAS 644
A P++Q A I+CG+CRTTLMYPYGA SV+CAVCQF TNVNM NGRVP TN PNGTA
Sbjct: 109 AHAPSSQVAQINCGHCRTTLMYPYGASSVKCAVCQFVTNVNMSNGRVPLPTNRPNGTACP 168
Query: 645 PGSCPLYIHSVNTTVSDPNRRRRNPMSVNESGKLVGNVVVGMTT 776
P + S TV NPMSV+ESGKLV NVVVG+TT
Sbjct: 169 PSTSTSTPPSQTQTVV-----VENPMSVDESGKLVSNVVVGVTT 207
Score = 96 bits (236), Expect = 4e-020
Identities = 40/66 (60%), Positives = 49/66 (74%)
Frame = +3
Query: 372 IVCGGCRTMLMYTRGANSVRCSCCQTVNLVPATPPTNQPAHISCGNCRTTLMYPYGAPSV 551
+VC GCR +LMY RGA++VRC+ C T+N+VP PP + AHI CG CRT LMY GA SV
Sbjct: 5 LVCHGCRNLLMYPRGASNVRCALCNTINMVPPPPPPHDMAHIICGGCRTMLMYTRGASSV 64
Query: 552 RCAVCQ 569
RC+ CQ
Sbjct: 65 RCSCCQ 70
Score = 91 bits (224), Expect = 1e-018
Identities = 40/50 (80%), Positives = 43/50 (86%), Gaps = 4/50 (8%)
Frame = +3
Query: 204 MQDQLVCHGCRNTLVYPRGATNVRCALCNTINMVPLHPHPPPPPHHHAHV 353
MQDQLVCHGCRN L+YPRGA+NVRCALCNTINMVP PPPPPH AH+
Sbjct: 1 MQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP----PPPPPHDMAHI 46
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 952,528,696
Number of Sequences: 33410
Number of Extensions: 952528696
Number of Successful Extensions: 42446726
Number of sequences better than 0.0: 0
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