BLASTX 7.6.2
Query= UN00738 /QuerySize=881
(880 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q32L78|TPC6B_BOVIN Trafficking protein particle complex subun... 86 2e-016
sp|Q86SZ2|TPC6B_HUMAN Trafficking protein particle complex subun... 86 2e-016
sp|Q9D289|TPC6B_MOUSE Trafficking protein particle complex subun... 85 5e-016
sp|Q78XR0|TPC6A_MOUSE Trafficking protein particle complex subun... 70 2e-011
sp|Q3T086|TPC6A_BOVIN Trafficking protein particle complex subun... 66 2e-010
sp|O75865|TPC6A_HUMAN Trafficking protein particle complex subun... 65 4e-010
sp|Q99394|TRS33_YEAST Transport protein particle 33 kDa subunit ... 64 2e-009
sp|Q09784|YA95_SCHPO Uncharacterized protein C13G6.05c OS=Schizo... 60 2e-008
>sp|Q32L78|TPC6B_BOVIN Trafficking protein particle complex subunit 6B OS=Bos
taurus GN=TRAPPC6B PE=2 SV=1
Length = 158
Score = 86 bits (212), Expect = 2e-016
Identities = 37/57 (64%), Positives = 48/57 (84%)
Frame = +3
Query: 183 RYTMERPRFSDHLEAIKFICKDFWSEVFKKQIDNLKTNHRGTFVLQDNKFRWLSRVS 353
R+T + RF D L+ +KFICKDFW+ VFKKQIDNL+TNH+G +VLQDNKFR L+++S
Sbjct: 50 RFTKDTARFKDELDIMKFICKDFWTTVFKKQIDNLRTNHQGIYVLQDNKFRLLTQMS 106
Score = 51 bits (121), Expect = 8e-006
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +3
Query: 426 SMYLYFPCGIIRGVLSNLGIPCAVSADISSLPTCSFVIRVK 548
S YL F CG+IRG LSNLGI V+A++SS+P C F + ++
Sbjct: 116 SKYLAFTCGLIRGGLSNLGIKSIVTAEVSSMPACKFQVMIQ 156
>sp|Q86SZ2|TPC6B_HUMAN Trafficking protein particle complex subunit 6B OS=Homo
sapiens GN=TRAPPC6B PE=1 SV=1
Length = 158
Score = 86 bits (212), Expect = 2e-016
Identities = 37/57 (64%), Positives = 48/57 (84%)
Frame = +3
Query: 183 RYTMERPRFSDHLEAIKFICKDFWSEVFKKQIDNLKTNHRGTFVLQDNKFRWLSRVS 353
R+T + RF D L+ +KFICKDFW+ VFKKQIDNL+TNH+G +VLQDNKFR L+++S
Sbjct: 50 RFTKDTARFKDELDIMKFICKDFWTTVFKKQIDNLRTNHQGIYVLQDNKFRLLTQMS 106
Score = 51 bits (121), Expect = 8e-006
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +3
Query: 426 SMYLYFPCGIIRGVLSNLGIPCAVSADISSLPTCSFVIRVK 548
S YL F CG+IRG LSNLGI V+A++SS+P C F + ++
Sbjct: 116 SKYLAFTCGLIRGGLSNLGIKSIVTAEVSSMPACKFQVMIQ 156
>sp|Q9D289|TPC6B_MOUSE Trafficking protein particle complex subunit 6B OS=Mus
musculus GN=Trappc6b PE=2 SV=1
Length = 158
Score = 85 bits (209), Expect = 5e-016
Identities = 37/57 (64%), Positives = 47/57 (82%)
Frame = +3
Query: 183 RYTMERPRFSDHLEAIKFICKDFWSEVFKKQIDNLKTNHRGTFVLQDNKFRWLSRVS 353
R+T + RF D L+ +KFICKDFW+ VFKKQIDNL+TNH+G +VLQDNKFR L ++S
Sbjct: 50 RFTKDTARFKDELDIMKFICKDFWTTVFKKQIDNLRTNHQGIYVLQDNKFRLLIQLS 106
Score = 51 bits (121), Expect = 8e-006
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +3
Query: 426 SMYLYFPCGIIRGVLSNLGIPCAVSADISSLPTCSFVIRVK 548
S YL F CG+IRG LSNLGI V+A++SS+P C F + ++
Sbjct: 116 SKYLAFTCGLIRGGLSNLGIKSIVTAEVSSMPACKFQVMIQ 156
>sp|Q78XR0|TPC6A_MOUSE Trafficking protein particle complex subunit 6A OS=Mus
musculus GN=Trappc6a PE=2 SV=1
Length = 159
Score = 70 bits (169), Expect = 2e-011
Identities = 29/65 (44%), Positives = 44/65 (67%)
Frame = +3
Query: 183 RYTMERPRFSDHLEAIKFICKDFWSEVFKKQIDNLKTNHRGTFVLQDNKFRWLSRVSIDP 362
R +E P F + L+A+KF+C+D W+ +F+K +D L+TNH+GT+VLQDN F L + P
Sbjct: 51 RLPLETPAFREELDALKFLCRDLWAAMFQKHMDGLRTNHQGTYVLQDNSFPLLVTMGSGP 110
Query: 363 SSEKE 377
+E
Sbjct: 111 QYLEE 115
>sp|Q3T086|TPC6A_BOVIN Trafficking protein particle complex subunit 6A OS=Bos
taurus GN=TRAPPC6A PE=2 SV=1
Length = 159
Score = 66 bits (160), Expect = 2e-010
Identities = 29/57 (50%), Positives = 40/57 (70%)
Frame = +3
Query: 183 RYTMERPRFSDHLEAIKFICKDFWSEVFKKQIDNLKTNHRGTFVLQDNKFRWLSRVS 353
R E F + L+ +KF+CKD W VF KQ+D+L+TNH+GT+VLQDN F L R++
Sbjct: 51 RLPRETLTFREELDILKFLCKDLWVAVFHKQMDSLRTNHQGTYVLQDNSFPLLVRMA 107
>sp|O75865|TPC6A_HUMAN Trafficking protein particle complex subunit 6A OS=Homo
sapiens GN=TRAPPC6A PE=1 SV=2
Length = 159
Score = 65 bits (158), Expect = 4e-010
Identities = 27/50 (54%), Positives = 37/50 (74%)
Frame = +3
Query: 183 RYTMERPRFSDHLEAIKFICKDFWSEVFKKQIDNLKTNHRGTFVLQDNKF 332
R E F + L+ +KF+CKD W VF+KQ+D+L+TNH+GT+VLQDN F
Sbjct: 51 RLPRETLAFREELDVLKFLCKDLWVAVFQKQMDSLRTNHQGTYVLQDNSF 100
>sp|Q99394|TRS33_YEAST Transport protein particle 33 kDa subunit
OS=Saccharomyces cerevisiae GN=TRS33 PE=1 SV=1
Length = 268
Score = 64 bits (153), Expect = 2e-009
Identities = 28/55 (50%), Positives = 38/55 (69%)
Frame = +3
Query: 213 DHLEAIKFICKDFWSEVFKKQIDNLKTNHRGTFVLQDNKFRWLSRVSIDPSSEKE 377
D L +KFIC+D W ++F KQIDNLKTNHRGTF L D +R + S++ ++ E
Sbjct: 152 DLLLIMKFICRDVWKQIFGKQIDNLKTNHRGTFYLLDYDYRPIQSFSLEEDAKNE 206
>sp|Q09784|YA95_SCHPO Uncharacterized protein C13G6.05c OS=Schizosaccharomyces
pombe GN=SPAC13G6.05c PE=1 SV=2
Length = 245
Score = 60 bits (144), Expect = 2e-008
Identities = 24/63 (38%), Positives = 40/63 (63%)
Frame = +3
Query: 183 RYTMERPRFSDHLEAIKFICKDFWSEVFKKQIDNLKTNHRGTFVLQDNKFRWLSRVSIDP 362
R + R R ++ + ++F+C++ W VF+K +DNLKTN RG FVL D F W ++++
Sbjct: 57 RLLLNRNRITETTDVMRFLCRELWPIVFRKPLDNLKTNRRGIFVLTDTYFYWFTKMTAMT 116
Query: 363 SSE 371
+E
Sbjct: 117 GTE 119
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,154,264,487
Number of Sequences: 518415
Number of Extensions: 3154264487
Number of Successful Extensions: 47263005
Number of sequences better than 0.0: 0
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