BLASTX 7.6.2
Query= UN00848 /QuerySize=751
(750 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G51880.1 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 310 5e-085
TAIR9_protein||AT3G51880.3 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 310 5e-085
TAIR9_protein||AT3G51880.2 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 304 7e-083
TAIR9_protein||AT1G20693.1 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 151 7e-037
TAIR9_protein||AT1G20696.3 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 150 9e-037
TAIR9_protein||AT1G20696.1 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 150 1e-036
TAIR9_protein||AT1G20693.3 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 149 2e-036
TAIR9_protein||AT1G20693.2 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 149 2e-036
TAIR9_protein||AT1G20696.2 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 122 3e-028
TAIR9_protein||AT2G17560.1 | Symbols: HMGB4, NFD4, NFD04 | HMGB4... 119 2e-027
TAIR9_protein||AT2G17560.2 | Symbols: HMGB4, NFD4, NFD04 | HMGB4... 119 2e-027
TAIR9_protein||AT2G17560.3 | Symbols: HMGB4, NFD4, NFD04 | HMGB4... 119 3e-027
TAIR9_protein||AT5G23420.1 | Symbols: HMGB6 | HMGB6; transcripti... 110 1e-024
TAIR9_protein||AT4G35570.1 | Symbols: HMGB5, NFD5, HMGD, NFD05 |... 96 2e-020
TAIR9_protein||AT2G34450.1 | Symbols: | high mobility group (HM... 92 4e-019
TAIR9_protein||AT5G63740.1 | Symbols: | zinc finger protein-rel... 54 9e-008
TAIR9_protein||AT5G22650.1 | Symbols: HD2B, HDT02, HDT2, ATHD2B,... 52 5e-007
TAIR9_protein||AT5G22650.2 | Symbols: HD2B, HDT02, HDT2, ATHD2B,... 52 5e-007
TAIR9_protein||AT5G03710.1 | Symbols: | unknown protein | chr5:... 50 1e-006
TAIR9_protein||AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant ... 50 2e-006
>TAIR9_protein||AT3G51880.1 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP
B 1); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr3:19247241-19248491 REVERSE
Length = 179
Score = 310 bits (794), Expect = 5e-085
Identities = 151/177 (85%), Positives = 167/177 (94%)
Frame = +1
Query: 166 MKTAKGKGKAKTTKEALKPVDDRKVGKRKAPAEKPSKRETRREKKAKKDPNKPKRAPSAF 345
MKTAKGK K KTTKEALKPVDDRKVGKRKAPAEKP+KRETR+EKKAKKDPNKPKRAPSAF
Sbjct: 1 MKTAKGKDKVKTTKEALKPVDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAF 60
Query: 346 FVFLEDFRQTFKKENPDVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDA 525
FVFLEDFR TFKKENP+VKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEK MDA
Sbjct: 61 FVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDA 120
Query: 526 YNKSMEEGSDESENSLSEVNDEDEASEEEEKIEKGKAGEDDEDDDDEDEDDEDDEED 696
YNK++EEGSDESE S SE+NDEDEAS EEE +EK AG+D+E++++ED+DD+DDEE+
Sbjct: 121 YNKNLEEGSDESEKSRSEINDEDEASGEEELLEKEAAGDDEEEEEEEDDDDDDDEEE 177
>TAIR9_protein||AT3G51880.3 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP
B 1); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr3:19247241-19248491 REVERSE
Length = 179
Score = 310 bits (794), Expect = 5e-085
Identities = 151/177 (85%), Positives = 167/177 (94%)
Frame = +1
Query: 166 MKTAKGKGKAKTTKEALKPVDDRKVGKRKAPAEKPSKRETRREKKAKKDPNKPKRAPSAF 345
MKTAKGK K KTTKEALKPVDDRKVGKRKAPAEKP+KRETR+EKKAKKDPNKPKRAPSAF
Sbjct: 1 MKTAKGKDKVKTTKEALKPVDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAF 60
Query: 346 FVFLEDFRQTFKKENPDVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDA 525
FVFLEDFR TFKKENP+VKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEK MDA
Sbjct: 61 FVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDA 120
Query: 526 YNKSMEEGSDESENSLSEVNDEDEASEEEEKIEKGKAGEDDEDDDDEDEDDEDDEED 696
YNK++EEGSDESE S SE+NDEDEAS EEE +EK AG+D+E++++ED+DD+DDEE+
Sbjct: 121 YNKNLEEGSDESEKSRSEINDEDEASGEEELLEKEAAGDDEEEEEEEDDDDDDDEEE 177
>TAIR9_protein||AT3G51880.2 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP
B 1); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr3:19247241-19248491 REVERSE
Length = 186
Score = 304 bits (776), Expect = 7e-083
Identities = 151/184 (82%), Positives = 167/184 (90%), Gaps = 7/184 (3%)
Frame = +1
Query: 166 MKTAKGKGKAKTTKEALKPVDDRKVGKRKAPAEKPSKRETRREKKAKKDPNKPKRAPSAF 345
MKTAKGK K KTTKEALKPVDDRKVGKRKAPAEKP+KRETR+EKKAKKDPNKPKRAPSAF
Sbjct: 1 MKTAKGKDKVKTTKEALKPVDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAF 60
Query: 346 FVFLEDFRQTFKKENPDVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDA 525
FVFLEDFR TFKKENP+VKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEK MDA
Sbjct: 61 FVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDA 120
Query: 526 YNKSMEEGSDESENSLSEVNDEDEASEE-------EEKIEKGKAGEDDEDDDDEDEDDED 684
YNK++EEGSDESE S SE+NDEDEAS E EE +EK AG+D+E++++ED+DD+D
Sbjct: 121 YNKNLEEGSDESEKSRSEINDEDEASGEVTIPLSNEELLEKEAAGDDEEEEEEEDDDDDD 180
Query: 685 DEED 696
DEE+
Sbjct: 181 DEEE 184
>TAIR9_protein||AT1G20693.1 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2
(HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor | chr1:7177282-7178487
FORWARD
Length = 145
Score = 151 bits (379), Expect = 7e-037
Identities = 80/124 (64%), Positives = 94/124 (75%), Gaps = 7/124 (5%)
Frame = +1
Query: 262 EKPSKRETRREKKAKKDPNKPKRAPSAFFVFLEDFRQTFKKENPDVKAVSAVGKAGGQKW 441
+KP+K R K A KDPNKPKR SAFFVF+EDFR+TFKKENP K+V+ VGKA G KW
Sbjct: 19 KKPAK-GAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKW 77
Query: 442 KSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEG---SDESENSLSEVNDEDEA---S 603
KS+S +EKAPY KA KRK EYEK + AYNK +EEG +ES+ S+SEVNDED+A S
Sbjct: 78 KSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGPKEDEESDKSVSEVNDEDDAEDGS 137
Query: 604 EEEE 615
EEEE
Sbjct: 138 EEEE 141
>TAIR9_protein||AT1G20696.3 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY
GROUP B 3); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr1:7179825-7181170 FORWARD
Length = 141
Score = 150 bits (378), Expect = 9e-037
Identities = 73/122 (59%), Positives = 94/122 (77%), Gaps = 3/122 (2%)
Frame = +1
Query: 271 SKRETRREKKAKKDPNKPKRAPSAFFVFLEDFRQTFKKENPDVKAVSAVGKAGGQKWKSM 450
+K+ + K A KDPNKPKR SAFFVF+EDFR T+K+E+P K+V+AVGKAGG+KWKS+
Sbjct: 18 TKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSL 77
Query: 451 SQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEG---SDESENSLSEVNDEDEASEEEEKI 621
S +EKAPY KA KRK EYEK M AYNK +EEG +ES+ S+SEVNDED+A + E++
Sbjct: 78 SDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEGPKEDEESDKSVSEVNDEDDAEDGSEEV 137
Query: 622 EK 627
+
Sbjct: 138 RR 139
>TAIR9_protein||AT1G20696.1 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY
GROUP B 3); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr1:7179825-7181174 FORWARD
Length = 142
Score = 150 bits (377), Expect = 1e-036
Identities = 77/121 (63%), Positives = 94/121 (77%), Gaps = 6/121 (4%)
Frame = +1
Query: 271 SKRETRREKKAKKDPNKPKRAPSAFFVFLEDFRQTFKKENPDVKAVSAVGKAGGQKWKSM 450
+K+ + K A KDPNKPKR SAFFVF+EDFR T+K+E+P K+V+AVGKAGG+KWKS+
Sbjct: 18 TKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSL 77
Query: 451 SQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEG---SDESENSLSEVNDEDEA---SEEE 612
S +EKAPY KA KRK EYEK M AYNK +EEG +ES+ S+SEVNDED+A SEEE
Sbjct: 78 SDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEGPKEDEESDKSVSEVNDEDDAEDGSEEE 137
Query: 613 E 615
E
Sbjct: 138 E 138
>TAIR9_protein||AT1G20693.3 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2
(HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor | chr1:7177282-7178487
FORWARD
Length = 144
Score = 149 bits (376), Expect = 2e-036
Identities = 79/124 (63%), Positives = 94/124 (75%), Gaps = 7/124 (5%)
Frame = +1
Query: 262 EKPSKRETRREKKAKKDPNKPKRAPSAFFVFLEDFRQTFKKENPDVKAVSAVGKAGGQKW 441
+KP+K R K A KDPNKPKR SAFFVF+EDFR+TFKKENP K+V+ VGKA G KW
Sbjct: 19 KKPAK-GAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKW 77
Query: 442 KSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEG---SDESENSLSEVNDEDEA---S 603
KS+S +EKAPY KA KRK EYEK + AYNK +EEG +ES+ S+SEVNDED+A S
Sbjct: 78 KSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGPKEDEESDKSVSEVNDEDDAEDGS 137
Query: 604 EEEE 615
EEE+
Sbjct: 138 EEED 141
>TAIR9_protein||AT1G20693.2 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2
(HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor | chr1:7177282-7178487
FORWARD
Length = 143
Score = 149 bits (375), Expect = 2e-036
Identities = 76/122 (62%), Positives = 92/122 (75%), Gaps = 4/122 (3%)
Frame = +1
Query: 262 EKPSKRETRREKKAKKDPNKPKRAPSAFFVFLEDFRQTFKKENPDVKAVSAVGKAGGQKW 441
+KP+K R K A KDPNKPKR SAFFVF+EDFR+TFKKENP K+V+ VGKA G KW
Sbjct: 19 KKPAK-GAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKW 77
Query: 442 KSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEG---SDESENSLSEVNDEDEASEEE 612
KS+S +EKAPY KA KRK EYEK + AYNK +EEG +ES+ S+SEVNDED+A +
Sbjct: 78 KSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGPKEDEESDKSVSEVNDEDDAEDGS 137
Query: 613 EK 618
E+
Sbjct: 138 EE 139
>TAIR9_protein||AT1G20696.2 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY
GROUP B 3); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr1:7179825-7181193 FORWARD
Length = 148
Score = 122 bits (305), Expect = 3e-028
Identities = 58/90 (64%), Positives = 71/90 (78%)
Frame = +1
Query: 271 SKRETRREKKAKKDPNKPKRAPSAFFVFLEDFRQTFKKENPDVKAVSAVGKAGGQKWKSM 450
+K+ + K A KDPNKPKR SAFFVF+EDFR T+K+E+P K+V+AVGKAGG+KWKS+
Sbjct: 18 TKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSL 77
Query: 451 SQAEKAPYEEKAAKRKAEYEKLMDAYNKSM 540
S +EKAPY KA KRK EYEK M AYNK +
Sbjct: 78 SDSEKAPYVAKADKRKVEYEKNMKAYNKKL 107
>TAIR9_protein||AT2G17560.1 | Symbols: HMGB4, NFD4, NFD04 | HMGB4 (HIGH MOBILITY
GROUP B 4); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr2:7642486-7643468 REVERSE
Length = 139
Score = 119 bits (298), Expect = 2e-027
Identities = 68/135 (50%), Positives = 85/135 (62%), Gaps = 11/135 (8%)
Frame = +1
Query: 235 KVGKRKAPAEKPSKRETRREKKA----KKDPNKPKRAPSAFFVFLEDFRQTFKKENPDVK 402
K G+ KA A +R R +KA KKDPN+PKR PSAFFVFLEDFR+ F NP+ K
Sbjct: 2 KGGESKAEATSTDQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNK 61
Query: 403 AVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEGS----DESENS 570
+V+ VGKA G +WK+M+ +KAPY KA RK EY K + YN + G+ D+S+ S
Sbjct: 62 SVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASGTNREEDDSDKS 121
Query: 571 LSEVNDEDEASEEEE 615
SEV DEA EEE
Sbjct: 122 KSEV---DEAVSEEE 133
>TAIR9_protein||AT2G17560.2 | Symbols: HMGB4, NFD4, NFD04 | HMGB4 (HIGH MOBILITY
GROUP B 4); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr2:7642486-7643468 REVERSE
Length = 139
Score = 119 bits (298), Expect = 2e-027
Identities = 68/135 (50%), Positives = 85/135 (62%), Gaps = 11/135 (8%)
Frame = +1
Query: 235 KVGKRKAPAEKPSKRETRREKKA----KKDPNKPKRAPSAFFVFLEDFRQTFKKENPDVK 402
K G+ KA A +R R +KA KKDPN+PKR PSAFFVFLEDFR+ F NP+ K
Sbjct: 2 KGGESKAEATSTDQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNK 61
Query: 403 AVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEGS----DESENS 570
+V+ VGKA G +WK+M+ +KAPY KA RK EY K + YN + G+ D+S+ S
Sbjct: 62 SVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASGTNREEDDSDKS 121
Query: 571 LSEVNDEDEASEEEE 615
SEV DEA EEE
Sbjct: 122 KSEV---DEAVSEEE 133
>TAIR9_protein||AT2G17560.3 | Symbols: HMGB4, NFD4, NFD04 | HMGB4 (HIGH MOBILITY
GROUP B 4); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr2:7642486-7643468 REVERSE
Length = 135
Score = 119 bits (296), Expect = 3e-027
Identities = 66/134 (49%), Positives = 86/134 (64%), Gaps = 9/134 (6%)
Frame = +1
Query: 235 KVGKRKAPAEKPSKRETRREKKA----KKDPNKPKRAPSAFFVFLEDFRQTFKKENPDVK 402
K G+ KA A +R R +KA KKDPN+PKR PSAFFVFLEDFR+ F NP+ K
Sbjct: 2 KGGESKAEATSTDQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNK 61
Query: 403 AVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEGS----DESENS 570
+V+ VGKA G +WK+M+ +KAPY KA RK EY K + YN + G+ D+S+ S
Sbjct: 62 SVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASGTNREEDDSDKS 121
Query: 571 LSEVNDEDEASEEE 612
SEV DE EA +++
Sbjct: 122 KSEV-DEAEAEDDD 134
>TAIR9_protein||AT5G23420.1 | Symbols: HMGB6 | HMGB6; transcription factor |
chr5:7888712-7890111 REVERSE
Length = 242
Score = 110 bits (274), Expect = 1e-024
Identities = 66/168 (39%), Positives = 102/168 (60%), Gaps = 6/168 (3%)
Frame = +1
Query: 196 KTTKEALKPVDDRKVGKRKAPAEKPSK-RETRREKKAKKDPNKPKRAPSAFFVFLEDFRQ 372
+T EA K ++K K + KP + ++T EKK+ NKPKR +AFF+F+ DFR+
Sbjct: 74 ETQAEAKKKPAEKK--KTTSDGPKPKRLKKTNDEKKSSSTSNKPKRPLTAFFIFMSDFRK 131
Query: 373 TFKKENPDVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEGS 552
TFK E+ A A K GG+KWKS+++ EK Y +KAA+ KAEY K +++ N + EE
Sbjct: 132 TFKSEHNGSLAKDA-AKIGGEKWKSLTEEEKKVYLDKAAELKAEYNKSLES-NDADEEEE 189
Query: 553 DESENSLSEVNDEDEASEEEEKIEKGKAGEDDEDDDDEDEDDEDDEED 696
DE + S +V+D +E +++ + K E+ +DD E E E++EE+
Sbjct: 190 DEEKQS-DDVDDAEEKQVDDDDEVEEKEVENTDDDKKEAEGKEEEEEE 236
>TAIR9_protein||AT4G35570.1 | Symbols: HMGB5, NFD5, HMGD, NFD05 | HMGB5 (HIGH
MOBILITY GROUP B 5); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor |
chr4:16887363-16888184 REVERSE
Length = 126
Score = 96 bits (238), Expect = 2e-020
Identities = 42/85 (49%), Positives = 58/85 (68%)
Frame = +1
Query: 298 KAKKDPNKPKRAPSAFFVFLEDFRQTFKKENPDVKAVSAVGKAGGQKWKSMSQAEKAPYE 477
K KDPN+PK+ PS FFVFL+DFR+ F NPD K+V VG+A G+KWK+M++ E+AP+
Sbjct: 26 KKTKDPNRPKKPPSPFFVFLDDFRKEFNLANPDNKSVGNVGRAAGKKWKTMTEEERAPFV 85
Query: 478 EKAAKRKAEYEKLMDAYNKSMEEGS 552
K+ +K EY M YN + G+
Sbjct: 86 AKSQSKKTEYAVTMQQYNMELANGN 110
>TAIR9_protein||AT2G34450.1 | Symbols: | high mobility group (HMG1/2) family
protein | chr2:14527918-14529448 REVERSE
Length = 152
Score = 92 bits (226), Expect = 4e-019
Identities = 48/129 (37%), Positives = 77/129 (59%), Gaps = 5/129 (3%)
Frame = +1
Query: 187 GKAKTTKEALKPVDD--RKVGKRKAPAEKPSKRETRREKKAKKDPNKPKRAPSAFFVFLE 360
G ++ + A+K + R R P KP + + ++K K PK+ +AFF FL+
Sbjct: 18 GSSRNLELAVKSSEGARRSTRLRLQPLRKP--KTSPKKKPVKLQTKMPKKPATAFFFFLD 75
Query: 361 DFRQTFKKENPDVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSM 540
DFR+ +++ENPDVK++ +GK G+KWK+M+ EK Y + A +++ E+ + M Y K M
Sbjct: 76 DFRKQYQEENPDVKSMREIGKTCGEKWKTMTYEEKVKYYDIATEKREEFHRAMTEYTKRM 135
Query: 541 EEGS-DESE 564
E G+ DESE
Sbjct: 136 ESGAHDESE 144
>TAIR9_protein||AT5G63740.1 | Symbols: | zinc finger protein-related |
chr5:25510776-25511456 REVERSE
Length = 227
Score = 54 bits (128), Expect = 9e-008
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Frame = +1
Query: 502 EYEKLMDAYNKSMEEGSDESENSLSEVNDED-EASEEEEKIEKGKAGEDDEDDDDEDEDD 678
EY K+ D +N EG + + E DED +A E+E++ E +DD+DDDD+D DD
Sbjct: 47 EYIKVYDDHNND-GEGDGDGDGDGDEDEDEDADADEDEDEDEDEDDDDDDDDDDDDDADD 105
Query: 679 EDDEED 696
DD+ED
Sbjct: 106 ADDDED 111
>TAIR9_protein||AT5G22650.1 | Symbols: HD2B, HDT02, HDT2, ATHD2B, HDA4, HD2 |
HD2B (HISTONE DEACETYLASE 2B); histone deacetylase |
chr5:7534120-7536054 FORWARD
Length = 307
Score = 52 bits (122), Expect = 5e-007
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 8/79 (10%)
Frame = +1
Query: 490 KRKAEYEKLMDAYNKSMEEGSDESENSLSEVNDEDEASEEEEKIEKGKAGEDDEDDDDED 669
K KA+ ++ A K + DES+ DEDE SEE++ EKG ++D+ DDDE+
Sbjct: 137 KPKAKPAEVKPAEEKPESDEEDESD-------DEDE-SEEDDDSEKGMDVDEDDSDDDEE 188
Query: 670 EDDEDDEED*TGDRGQSLD 726
ED ED+EE+ T + + ++
Sbjct: 189 EDSEDEEEEETPKKPEPIN 207
>TAIR9_protein||AT5G22650.2 | Symbols: HD2B, HDT02, HDT2, ATHD2B, HDA4, HD2 |
HD2B (HISTONE DEACETYLASE 2B); histone deacetylase |
chr5:7534120-7536054 FORWARD
Length = 306
Score = 52 bits (122), Expect = 5e-007
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 8/79 (10%)
Frame = +1
Query: 490 KRKAEYEKLMDAYNKSMEEGSDESENSLSEVNDEDEASEEEEKIEKGKAGEDDEDDDDED 669
K KA+ ++ A K + DES+ DEDE SEE++ EKG ++D+ DDDE+
Sbjct: 137 KPKAKPAEVKPAEEKPESDEEDESD-------DEDE-SEEDDDSEKGMDVDEDDSDDDEE 188
Query: 670 EDDEDDEED*TGDRGQSLD 726
ED ED+EE+ T + + ++
Sbjct: 189 EDSEDEEEEETPKKPEPIN 207
>TAIR9_protein||AT5G03710.1 | Symbols: | unknown protein | chr5:971107-971627
FORWARD
Length = 82
Score = 50 bits (118), Expect = 1e-006
Identities = 20/60 (33%), Positives = 41/60 (68%)
Frame = +1
Query: 517 MDAYNKSMEEGSDESENSLSEVNDEDEASEEEEKIEKGKAGEDDEDDDDEDEDDEDDEED 696
M+ + + EE +E E E +E+E EEEE+ E+ + E++E++++E+E++E++EE+
Sbjct: 1 MEFWGEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 60
>TAIR9_protein||AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis
thaliana protein match is: EMB2758 (embryo defective 2758)
(TAIR:AT4G33990.1); Has 45368 Blast hits to 16108 proteins in 635
species: Archae - 60; Bacteria - 10333; Metazoa - 8211; Fungi - 3499;
Plants - 14806; Viruses - 492; Other Eukaryotes - 7967 (source: NCBI
BLink). | chr3:18212187-18217848 REVERSE
Length = 1216
Score = 50 bits (117), Expect = 2e-006
Identities = 25/66 (37%), Positives = 38/66 (57%)
Frame = +1
Query: 511 KLMDAYNKSMEEGSDESENSLSEVNDEDEASEEEEKIEKGKAGEDDEDDDDEDEDDEDDE 690
+LM + E DES + SE EDE EE I + + +DD+DDDD+++DD+ D
Sbjct: 916 ELMGLSDSDFETEDDESGDDDSEDTGEDEDEEEWVAILEDEDEDDDDDDDDDEDDDDSDS 975
Query: 691 ED*TGD 708
++ GD
Sbjct: 976 DESLGD 981
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,217,863,881
Number of Sequences: 33410
Number of Extensions: 1217863881
Number of Successful Extensions: 47965272
Number of sequences better than 0.0: 0
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