BLASTX 7.6.2
Query= UN00997 /QuerySize=1555
(1554 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G67230.1 | Symbols: LINC1 | LINC1 (LITTLE NUCL... 607 7e-174
TAIR9_protein||AT1G13220.2 | Symbols: LINC2 | LINC2 (LITTLE NUCL... 332 6e-091
TAIR9_protein||AT1G68790.1 | Symbols: LINC3 | LINC3 (LITTLE NUCL... 313 3e-085
TAIR9_protein||AT1G13220.1 | Symbols: LINC2 | LINC2 (LITTLE NUCL... 273 3e-073
TAIR9_protein||AT5G65770.1 | Symbols: LINC4 | LINC4 (LITTLE NUCL... 220 3e-057
TAIR9_protein||AT5G65770.2 | Symbols: LINC4 | LINC4 (LITTLE NUCL... 175 7e-044
TAIR9_protein||AT2G18540.1 | Symbols: | cupin family protein | ... 70 3e-012
TAIR9_protein||AT2G18876.1 | Symbols: | unknown protein | chr2:... 60 3e-009
TAIR9_protein||AT3G28770.1 | Symbols: | unknown protein | chr3:... 60 3e-009
TAIR9_protein||AT5G27330.1 | Symbols: | LOCATED IN: endoplasmic... 58 1e-008
TAIR9_protein||AT2G18876.2 | Symbols: | unknown protein | chr2:... 55 1e-007
TAIR9_protein||AT1G56660.1 | Symbols: | unknown protein | chr1:... 53 4e-007
TAIR9_protein||AT1G20920.1 | Symbols: | DEAD box RNA helicase, ... 53 5e-007
>TAIR9_protein||AT1G67230.1 | Symbols: LINC1 | LINC1 (LITTLE NUCLEI1) |
chr1:25151561-25156032 REVERSE
Length = 1133
Score = 607 bits (1564), Expect = 7e-174
Identities = 312/361 (86%), Positives = 348/361 (96%), Gaps = 1/361 (0%)
Frame = -3
Query: 1081 DDPRRLPDKVSELEKELFEYQHNMGLLLLEKKEWSSKFEELQLEFEEANQCLRRERNAHM 902
DDPR LP+K+SELEKELFEYQH+MGLLL+EKKEWSS++E LQ FEE N+CL++ERNAH+
Sbjct: 47 DDPRILPEKISELEKELFEYQHSMGLLLIEKKEWSSQYEALQQAFEEVNECLKQERNAHL 106
Query: 901 IAIADVEKREEGLRKALGIEKQCALDLQKALRELRSENAEIKFTADSKLEEANALVRSVE 722
IAIADVEKREEGLRKALGIEKQCALDL+KAL+ELR+ENAEIKFTADSKL EANALVRSVE
Sbjct: 107 IAIADVEKREEGLRKALGIEKQCALDLEKALKELRAENAEIKFTADSKLTEANALVRSVE 166
Query: 721 EKSLEVEAKLRAVDARLAEVSRKSSEVERRSKDVEARESSLQRERFSHITEREAEEANLT 542
EKSLEVEAKLRAVDA+LAEVSRKSS+VER++K+VEARESSLQRERFS+I EREA+EA L+
Sbjct: 167 EKSLEVEAKLRAVDAKLAEVSRKSSDVERKAKEVEARESSLQRERFSYIAEREADEATLS 226
Query: 541 KQREDLREWERKLQEGEERVAKSQMIVKQREDRANESDKIIKQKGKELEEAQKKIDAANL 362
KQREDLREWERKLQEGEERVAKSQMIVKQREDRANESDKIIKQKGKELEEAQKKIDAANL
Sbjct: 227 KQREDLREWERKLQEGEERVAKSQMIVKQREDRANESDKIIKQKGKELEEAQKKIDAANL 286
Query: 361 ALKK-KEDISSRIKALALREQETDVLKKSIETKERELLALQEKLDAREKVAVQQLIDEHK 185
A+KK ++D+SSRIK LALREQETDVLKKSIETK REL ALQEKL+AREK+AVQQL+DEH+
Sbjct: 287 AVKKLEDDVSSRIKDLALREQETDVLKKSIETKARELQALQEKLEAREKMAVQQLVDEHQ 346
Query: 184 AKLEAKEREFEMEMEQKRKSVDDSLRSKVAEVEKREAEWKHMEEKVAKREQALERKLEKH 5
AKL++ +REFE+EMEQKRKS+DDSL+SKVAEVEKREAEWKHMEEKVAKREQAL+RKLEKH
Sbjct: 347 AKLDSTQREFELEMEQKRKSIDDSLKSKVAEVEKREAEWKHMEEKVAKREQALDRKLEKH 406
Query: 4 K 2
K
Sbjct: 407 K 407
Score = 62 bits (148), Expect = 1e-009
Identities = 27/35 (77%), Positives = 29/35 (82%)
Frame = -1
Query: 1188 MSTPLKVWQRWSTPTKATNPDSNGKVSGMGSEIST 1084
MSTPLKVWQRWSTPTKATNPDSNG G G ++ T
Sbjct: 1 MSTPLKVWQRWSTPTKATNPDSNGSSHGTGLDMVT 35
>TAIR9_protein||AT1G13220.2 | Symbols: LINC2 | LINC2 (LITTLE NUCLEI2) |
chr1:4515699-4520071 FORWARD
Length = 1129
Score = 332 bits (849), Expect = 6e-091
Identities = 173/358 (48%), Positives = 253/358 (70%), Gaps = 1/358 (0%)
Frame = -3
Query: 1078 DPRRLPDKVSELEKELFEYQHNMGLLLLEKKEWSSKFEELQLEFEEANQCLRRERNAHMI 899
D L +K+S LEKEL+ YQHNMGLLL+E KE SK E+L F+EA + L+RE+++H+
Sbjct: 81 DQEALLEKISTLEKELYGYQHNMGLLLMENKELVSKHEQLNQAFQEAQEILKREQSSHLY 140
Query: 898 AIADVEKREEGLRKALGIEKQCALDLQKALRELRSENAEIKFTADSKLEEANALVRSVEE 719
A+ VE+REE LRKALG+EKQC +L+KALRE++ EN++I+ ++++KL EANALV SV
Sbjct: 141 ALTTVEQREENLRKALGLEKQCVQELEKALREIQEENSKIRLSSEAKLVEANALVASVNG 200
Query: 718 KSLEVEAKLRAVDARLAEVSRKSSEVERRSKDVEARESSLQRERFSHITEREAEEANLTK 539
+S +VE K+ + +++LAE +RKSSE++ R K+VE RES LQ+ER S ERE+ E K
Sbjct: 201 RSSDVENKIYSAESKLAEATRKSSELKLRLKEVETRESVLQQERLSFTKERESYEGTFQK 260
Query: 538 QREDLREWERKLQEGEERVAKSQMIVKQREDRANESDKIIKQKGKELEEAQKKIDAANLA 359
QRE L EWE+KLQ EE + + + + QRE++ NE +K +K K KELEE +K+D +
Sbjct: 261 QREYLNEWEKKLQGKEESITEQKRNLNQREEKVNEIEKKLKLKEKELEEWNRKVDLSMSK 320
Query: 358 LKK-KEDISSRIKALALREQETDVLKKSIETKERELLALQEKLDAREKVAVQQLIDEHKA 182
K+ +EDI+ R++ L +E+E L+ ++ KE EL A +EKL ARE +Q+LID+ K
Sbjct: 321 SKETEEDITKRLEELTTKEKEAHTLQITLLAKENELRAFEEKLIAREGTEIQKLIDDQKE 380
Query: 181 KLEAKEREFEMEMEQKRKSVDDSLRSKVAEVEKREAEWKHMEEKVAKREQALERKLEK 8
L +K EFE+E E+ RKS+D L+ K+ E+E+++ E H EEK+ KR QA+ +K ++
Sbjct: 381 VLGSKMLEFELECEEIRKSLDKELQRKIEELERQKVEIDHSEEKLEKRNQAMNKKFDR 438
>TAIR9_protein||AT1G68790.1 | Symbols: LINC3 | LINC3 (LITTLE NUCLEI3) |
chr1:25834932-25839157 REVERSE
Length = 1086
Score = 313 bits (800), Expect = 3e-085
Identities = 162/357 (45%), Positives = 251/357 (70%), Gaps = 1/357 (0%)
Frame = -3
Query: 1078 DPRRLPDKVSELEKELFEYQHNMGLLLLEKKEWSSKFEELQLEFEEANQCLRRERNAHMI 899
D L +K+ +LEKELF+YQHNMGLLL+EKK+W+S ELQ ++EA + L+RE+ ++ I
Sbjct: 59 DRDALIEKILKLEKELFDYQHNMGLLLIEKKQWTSTNNELQQAYDEAMEMLKREKTSNAI 118
Query: 898 AIADVEKREEGLRKALGIEKQCALDLQKALRELRSENAEIKFTADSKLEEANALVRSVEE 719
+ + +KREE LRKAL EKQ +L+ L+ + E++ +K T+++KLEEANALV ++E
Sbjct: 119 TLNEADKREENLRKALIDEKQFVAELENDLKYWQREHSVVKSTSEAKLEEANALVIGMKE 178
Query: 718 KSLEVEAKLRAVDARLAEVSRKSSEVERRSKDVEARESSLQRERFSHITEREAEEANLTK 539
K+LEV+ + + + + ++RKSSE+ER+ K+VE RE QRE S +TEREA EA K
Sbjct: 179 KALEVDRERAIAEEKFSVMNRKSSELERKLKEVETREKVHQREHLSLVTEREAHEAVFYK 238
Query: 538 QREDLREWERKLQEGEERVAKSQMIVKQREDRANESDKIIKQKGKELEEAQKKIDAANLA 359
QREDL+EWE+KL E+R+++ + + RE+R E+++ I++K K LE Q+KI A
Sbjct: 239 QREDLQEWEKKLTLEEDRLSEVKRSINHREERVMENERTIEKKEKILENLQQKISVAKSE 298
Query: 358 L-KKKEDISSRIKALALREQETDVLKKSIETKERELLALQEKLDAREKVAVQQLIDEHKA 182
L +K+E I ++ ++L+E++ + +K ++ KE+EL +E L RE++ + +L+D+ KA
Sbjct: 299 LTEKEESIKIKLNDISLKEKDFEAMKAKVDIKEKELHEFEENLIEREQMEIGKLLDDQKA 358
Query: 181 KLEAKEREFEMEMEQKRKSVDDSLRSKVAEVEKREAEWKHMEEKVAKREQALERKLE 11
L+++ REFEME+EQ R+S+D+ L K AE+E+ + E H EEK+AKRE ALE+K E
Sbjct: 359 VLDSRRREFEMELEQMRRSLDEELEGKKAEIEQLQVEISHKEEKLAKREAALEKKEE 415
>TAIR9_protein||AT1G13220.1 | Symbols: LINC2 | LINC2 (LITTLE NUCLEI2) |
chr1:4515660-4517415 FORWARD
Length = 392
Score = 273 bits (696), Expect = 3e-073
Identities = 144/289 (49%), Positives = 206/289 (71%), Gaps = 1/289 (0%)
Frame = -3
Query: 1078 DPRRLPDKVSELEKELFEYQHNMGLLLLEKKEWSSKFEELQLEFEEANQCLRRERNAHMI 899
D L +K+S LEKEL+ YQHNMGLLL+E KE SK E+L F+EA + L+RE+++H+
Sbjct: 94 DQEALLEKISTLEKELYGYQHNMGLLLMENKELVSKHEQLNQAFQEAQEILKREQSSHLY 153
Query: 898 AIADVEKREEGLRKALGIEKQCALDLQKALRELRSENAEIKFTADSKLEEANALVRSVEE 719
A+ VE+REE LRKALG+EKQC +L+KALRE++ EN++I+ ++++KL EANALV SV
Sbjct: 154 ALTTVEQREENLRKALGLEKQCVQELEKALREIQEENSKIRLSSEAKLVEANALVASVNG 213
Query: 718 KSLEVEAKLRAVDARLAEVSRKSSEVERRSKDVEARESSLQRERFSHITEREAEEANLTK 539
+S +VE K+ + +++LAE +RKSSE++ R K+VE RES LQ+ER S ERE+ E K
Sbjct: 214 RSSDVENKIYSAESKLAEATRKSSELKLRLKEVETRESVLQQERLSFTKERESYEGTFQK 273
Query: 538 QREDLREWERKLQEGEERVAKSQMIVKQREDRANESDKIIKQKGKELEEAQKKIDAANLA 359
QRE L EWE+KLQ EE + + + + QRE++ NE +K +K K KELEE +K+D +
Sbjct: 274 QREYLNEWEKKLQGKEESITEQKRNLNQREEKVNEIEKKLKLKEKELEEWNRKVDLSMSK 333
Query: 358 LKK-KEDISSRIKALALREQETDVLKKSIETKERELLALQEKLDAREKV 215
K+ +EDI+ R++ L +E+E L+ ++ KE EL A +EKL ARE V
Sbjct: 334 SKETEEDITKRLEELTTKEKEAHTLQITLLAKENELRAFEEKLIAREGV 382
>TAIR9_protein||AT5G65770.1 | Symbols: LINC4 | LINC4 (LITTLE NUCLEI4) |
chr5:26311587-26315610 FORWARD
Length = 1011
Score = 220 bits (558), Expect = 3e-057
Identities = 126/363 (34%), Positives = 210/363 (57%), Gaps = 1/363 (0%)
Frame = -3
Query: 1108 GHGERDQYDDDPRRLPDKVSELEKELFEYQHNMGLLLLEKKEWSSKFEELQLEFEEANQC 929
G E+ + D L +++LE E+++YQHNMGLLLLEK E SS++EE++ +E++
Sbjct: 48 GFDEQSIKNRDKAALIAYIAKLESEVYDYQHNMGLLLLEKNELSSQYEEIKASVDESDLT 107
Query: 928 LRRERNAHMIAIADVEKREEGLRKALGIEKQCALDLQKALRELRSENAEIKFTADSKLEE 749
RE++A++ A+A+ +KREE L+K +GI K+C L+K L E+R+E AE K +A S + E
Sbjct: 108 HMREKSAYVSALAEAKKREESLKKDVGIAKECISSLEKTLHEMRAECAETKVSAGSTMSE 167
Query: 748 ANALVRSVEEKSLEVEAKLRAVDARLAEVSRKSSEVERRSKDVEARESSLQRERFSHITE 569
A+ ++ +K + EAK+RA +A AE +R ER+ K+VE+RE L R S +E
Sbjct: 168 AHVMIEDALKKLADAEAKMRAAEALQAEANRYHRIAERKLKEVESREDDLTRRLASFKSE 227
Query: 568 REAEEANLTKQREDLREWERKLQEGEERVAKSQMIVKQREDRANESDKIIKQKGKELEEA 389
E +E + +R+ L E + LQ+ ER+ +Q+ + QRED + + + K L+ A
Sbjct: 228 CETKENEMVIERQTLNERRKSLQQEHERLLDAQVSLNQREDHIFARSQELAELEKGLDTA 287
Query: 388 QKKIDAANLALK-KKEDISSRIKALALREQETDVLKKSIETKERELLALQEKLDAREKVA 212
+ + A + KK ++ + A RE+ + S+ KE+ELL +EK+ ++E
Sbjct: 288 KTTFEEERKAFEDKKSNLEIALALCAKREEAVSERESSLLKKEQELLVAEEKIASKESEL 347
Query: 211 VQQLIDEHKAKLEAKEREFEMEMEQKRKSVDDSLRSKVAEVEKREAEWKHMEEKVAKREQ 32
+Q ++ + L ++ + E E+E K KSV+ + SK E RE + K E+ V ++E
Sbjct: 348 IQNVLANQEVILRKRKSDVEAELECKSKSVEVEIESKRRAWELREVDIKQREDLVGEKEH 407
Query: 31 ALE 23
LE
Sbjct: 408 DLE 410
>TAIR9_protein||AT5G65770.2 | Symbols: LINC4 | LINC4 (LITTLE NUCLEI4) |
chr5:26311587-26315544 FORWARD
Length = 1043
Score = 175 bits (443), Expect = 7e-044
Identities = 112/374 (29%), Positives = 206/374 (55%), Gaps = 14/374 (3%)
Frame = -3
Query: 1108 GHGERDQYDDDPRRLPDKVSELEKELFEYQHNMGLLLLEKKEWSSKFEELQLEFEEANQC 929
G E+ + D L +++LE E+++YQHNMGLLLLEK E SS++EE++ +E++
Sbjct: 48 GFDEQSIKNRDKAALIAYIAKLESEVYDYQHNMGLLLLEKNELSSQYEEIKASVDESDLT 107
Query: 928 LRRERNAHMIAIADVEKREEGLRKALGIEKQCALDLQKALRELRSENAEIKFTADSKLEE 749
RE++A++ A+A+ +KREE L+K +GI K+C L+K L E+R+E AE K +A S + E
Sbjct: 108 HMREKSAYVSALAEAKKREESLKKDVGIAKECISSLEKTLHEMRAECAETKVSAGSTMSE 167
Query: 748 ANALVRSVEEKSLEVEAKLRAVDARLAEVSRKSSEVERRSKDVEARESSLQRERFSHITE 569
A+ ++ +K + EAK+RA +A AE +R ER+ K+VE+RE L R S +E
Sbjct: 168 AHVMIEDALKKLADAEAKMRAAEALQAEANRYHRIAERKLKEVESREDDLTRRLASFKSE 227
Query: 568 REAEEANLTKQREDLREWERKLQEGEERVAKSQMIVKQREDRANESDKIIKQKGKELEEA 389
E +E + +R+ L E + LQ+ ER+ +Q+ + QRED + + + K L+ A
Sbjct: 228 CETKENEMVIERQTLNERRKSLQQEHERLLDAQVSLNQREDHIFARSQELAELEKGLDTA 287
Query: 388 QKKIDAANLALK-KKEDISSRIKALALREQETDVLKKSIETKERELLALQEKLDAREKVA 212
+ + A + KK ++ + A RE+ S+ L + +++ +
Sbjct: 288 KTTFEEERKAFEDKKSNLEIALALCAKREEVCFYSHNSL------LFLVLHYRSSKKFLG 341
Query: 211 VQQLIDEHKAKLEAKEREFEMEMEQKRKSVDDSLRSKVAEVE----KREAEWKHMEEKVA 44
+ + E ++ L KE+E + E+ + +++ +A E KR+++ +E ++
Sbjct: 342 DKIAVSERESSLLKKEQELLVAEEKIASKESELIQNVLANQEVILRKRKSD---VEAELE 398
Query: 43 KREQALERKLEKHK 2
+ +++E ++E +
Sbjct: 399 CKSKSVEVEIESKR 412
>TAIR9_protein||AT2G18540.1 | Symbols: | cupin family protein |
chr2:8042382-8045008 REVERSE
Length = 708
Score = 70 bits (170), Expect = 3e-012
Identities = 55/222 (24%), Positives = 113/222 (50%), Gaps = 23/222 (10%)
Frame = -3
Query: 667 EVSRKSSEVERRSKDVEARESSLQRERFSHITEREAEEANLTKQREDLREWERKLQEGEE 488
E+S+ E+E R + E ++R R R+ EEA K+RE+ R+ +E E
Sbjct: 424 ELSKLMREIEERKR---REEEEIERRRKEEEEARKREEA---KRREEEEAKRREEEETER 477
Query: 487 RVAKSQMIVKQREDRANESDKIIKQKGKELEEAQKKIDAANLALKKKEDISSRIKALALR 308
+ + + K+ E+R E ++ +++ EE +K+ + A A K++E+ R
Sbjct: 478 KKREEEEARKREEERKREEEEAKRRE----EERKKREEEAEQARKREEE----------R 523
Query: 307 EQETDVLKKSIETKERELLALQEKLDAREKVAVQQLIDEHKAKLEAKEREFEMEMEQKRK 128
E+E ++ KK E ++R+ +E+++ + + ++ E +A+ +ER+ E EM ++R+
Sbjct: 524 EKEEEMAKKREEERQRK---EREEVERKRREEQERKRREEEARKREEERKREEEMAKRRE 580
Query: 127 SVDDSLRSKVAEVEKREAEWKHMEEKVAKREQALERKLEKHK 2
+ E + RE + + EE++AKR + +K E+ +
Sbjct: 581 QERQRKEREEVERKIREEQERKREEEMAKRREQERQKKEREE 622
>TAIR9_protein||AT2G18876.1 | Symbols: | unknown protein | chr2:8169683-8172287
FORWARD
Length = 383
Score = 60 bits (144), Expect = 3e-009
Identities = 55/269 (20%), Positives = 124/269 (46%), Gaps = 4/269 (1%)
Frame = -3
Query: 814 ALRELRSENAEIKFTADSKLEEANALVRSVEEKSLEVEAKLRAVDARLAEVSRKSSEVER 635
AL + R + E + +A+ + + + + +E K +E +L+A + L V+R + +
Sbjct: 73 ALIQQRQRDVEFRESANDQRQRLLSDMARLEAKVERLETQLQAKERELGSVTRTEA---K 129
Query: 634 RSKDVEARESSLQRERFSHITEREAEEANLTKQREDLREWERKLQEGEERVAKSQMIVKQ 455
+ ++ + LQ+ER A + T+Q + ++ E++ + +ER+ + M K+
Sbjct: 130 NTAALKTQNEKLQKERDEFQRMVIANQQVKTQQLHETKKKEKEYIKLQERLNQVLMEKKK 189
Query: 454 REDRANESDKIIKQKGKELEEAQKKIDAANLALKKKEDISSRIKALALREQETDVLKKSI 275
E +++++G++ K ++ K + ++ + L + L +S
Sbjct: 190 ETRSGMEIMNLLQKEGRQRGTWSGKKTDSDFYKKIVDAYEAKNQELMAENTDLRALLRST 249
Query: 274 ETKERELLALQEKLDAREKVA-VQQLIDEHKAKLEAKEREFEMEMEQKRKSVDDSLRSKV 98
+ R L L + VA + D ++ L K F++ R ++DSLRSK+
Sbjct: 250 QGDMRSFLNASGGLTNQSLVANGRHGADPSQSPLGGKTDVFDLPFRMARGQIEDSLRSKM 309
Query: 97 AEVEKREAEWKHMEEKVAKREQALERKLE 11
+++R + +++V+ +A ER+LE
Sbjct: 310 VSIKERMGQLVDAQKEVSITSEASERELE 338
>TAIR9_protein||AT3G28770.1 | Symbols: | unknown protein |
chr3:10796716-10803237 FORWARD
Length = 2082
Score = 60 bits (144), Expect = 3e-009
Identities = 57/257 (22%), Positives = 128/257 (49%), Gaps = 15/257 (5%)
Frame = -3
Query: 760 KLEEANALVRSVEEKSLE-VEAKLRAVDARLAEVSR-KSSEVERRSKDVEARESSLQRER 587
K E N+ ++ EE E V +L+ + E ++ ++S+++ +KD + ++ S +
Sbjct: 948 KKESKNSNMKKKEEDKKEYVNNELKKQEDNKKETTKSENSKLKEENKDNKEKKES--EDS 1005
Query: 586 FSHITEREAEEANLTKQREDLREWERKLQEGEERVAKSQMIVKQREDRANESDKIIKQKG 407
S E++ E +K +E+ ++ ++K Q+ + S+ +++ + E + +K K
Sbjct: 1006 ASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSE---ERKSKKEKEESRDLKAKK 1062
Query: 406 KELEEAQKKIDAANLALKKKEDISSRIKALALREQETDVLKKSIE----TKERELLALQE 239
KE EE ++K ++ N KKKED +++++E KK E K+ E E
Sbjct: 1063 KE-EETKEKKESENHKSKKKEDKKEHEDNKSMKKEEDKKEKKKHEESKSRKKEEDKKDME 1121
Query: 238 KLDAREKVAVQQLIDEHKAKLEAKEREFEMEMEQKRKSVDDSLRSKVAEVEKREAEWKHM 59
KL+ + ++ +E K K + E + ++K+++ + +S+ E+E +++ +
Sbjct: 1122 KLEDQNSNKKKEDKNEKKKSQHVKLVKKESDKKEKKENEE---KSETKEIESSKSQKNEV 1178
Query: 58 EEKVAKREQALERKLEK 8
++K K + ++K EK
Sbjct: 1179 DKKEKKSSKDQQKKKEK 1195
>TAIR9_protein||AT5G27330.1 | Symbols: | LOCATED IN: endoplasmic reticulum;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages;
CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G05130.1); Has 110457 Blast hits to 56483 proteins in 2051
species: Archae - 1653; Bacteria - 15111; Metazoa - 52441; Fungi -
7858; Plants - 4309; Viruses - 584; Other Eukaryotes - 28501 (source:
NCBI BLink). | chr5:9632997-9634883 REVERSE
Length = 629
Score = 58 bits (139), Expect = 1e-008
Identities = 79/343 (23%), Positives = 157/343 (45%), Gaps = 33/343 (9%)
Frame = -3
Query: 1069 RLPDKVSELEKELFEYQHNMGLLLLEKKEWSSKFEELQLEFEEANQCLRRERNAHMIAIA 890
RL + L +E+ + G L+ E+K+ E E E + L + +
Sbjct: 197 RLEMREVSLGEEVGRLKCENGRLVKERKKREEVIERGNRERSELVESLEEK-----VREI 251
Query: 889 DVEKRE-EGLRKALGIEKQCALDLQKALRELRSENAEIKFTADSKLEEANALVRSVEEKS 713
DV KRE EG+ K EK ++++ R+ R E+ + KL + N +V S+ ++
Sbjct: 252 DVLKREIEGVVK----EK---MEVEMVRRDQREMIVEL----EKKLGDMNEIVESLTKER 300
Query: 712 LEVEAKLRAVDARLAEVSR----KSSEVERRSKDVEARESSLQR---ERFSHITEREAEE 554
+ ++ ++ L EV+ ++ ++ K+ +ES L+ E S E E
Sbjct: 301 EGLRGQVVGLEKSLDEVTEEAKARAEQINELVKEKTVKESELEGLMVENNSIKKEIEMAM 360
Query: 553 ANLTKQREDLREWERKLQEGEERVAKSQMIVKQREDRANESDKIIKQKGKELEEAQKKID 374
+ + + + + R+ E +RV + + + A E + Q K+ + K +
Sbjct: 361 VQFSDKEKLVEQLLREKNELVQRVVNQEAEIVELSKLAGEQKHAVAQLRKDYNDQIKNGE 420
Query: 373 AANLALKKKEDISSRIKALALREQETDVLKKSIETKERELLALQEKLDAREKVAVQQLID 194
N + + +D ALAL E E D K+++ ++R ++AL+EK+ A EK +
Sbjct: 421 KLNCNVSQLKD------ALALVEVERDNAGKALDEEKRNMVALKEKVVALEK--TNEATG 472
Query: 193 EHKAKLEAKEREFEMEMEQKRKSVDDSLRSKVAEVEKREAEWK 65
+ K++A ER ++ +++ ++ +SLR++ A ++K E K
Sbjct: 473 KELEKIKA-ERGRLIKEKKELENRSESLRNEKAILQKDIVELK 514
>TAIR9_protein||AT2G18876.2 | Symbols: | unknown protein | chr2:8170594-8172287
FORWARD
Length = 285
Score = 55 bits (130), Expect = 1e-007
Identities = 50/240 (20%), Positives = 110/240 (45%), Gaps = 4/240 (1%)
Frame = -3
Query: 727 VEEKSLEVEAKLRAVDARLAEVSRKSSEVERRSKDVEARESSLQRERFSHITEREAEEAN 548
+E K +E +L+A + L V+R + + + ++ + LQ+ER A +
Sbjct: 4 LEAKVERLETQLQAKERELGSVTRTEA---KNTAALKTQNEKLQKERDEFQRMVIANQQV 60
Query: 547 LTKQREDLREWERKLQEGEERVAKSQMIVKQREDRANESDKIIKQKGKELEEAQKKIDAA 368
T+Q + ++ E++ + +ER+ + M K+ E +++++G++ K +
Sbjct: 61 KTQQLHETKKKEKEYIKLQERLNQVLMEKKKETRSGMEIMNLLQKEGRQRGTWSGKKTDS 120
Query: 367 NLALKKKEDISSRIKALALREQETDVLKKSIETKERELLALQEKLDAREKVA-VQQLIDE 191
+ K + ++ + L + L +S + R L L + VA + D
Sbjct: 121 DFYKKIVDAYEAKNQELMAENTDLRALLRSTQGDMRSFLNASGGLTNQSLVANGRHGADP 180
Query: 190 HKAKLEAKEREFEMEMEQKRKSVDDSLRSKVAEVEKREAEWKHMEEKVAKREQALERKLE 11
++ L K F++ R ++DSLRSK+ +++R + +++V+ +A ER+LE
Sbjct: 181 SQSPLGGKTDVFDLPFRMARGQIEDSLRSKMVSIKERMGQLVDAQKEVSITSEASERELE 240
>TAIR9_protein||AT1G56660.1 | Symbols: | unknown protein |
chr1:21238809-21240377 FORWARD
Length = 523
Score = 53 bits (126), Expect = 4e-007
Identities = 57/277 (20%), Positives = 123/277 (44%), Gaps = 10/277 (3%)
Frame = -3
Query: 829 LDLQKALRELRSENAEIKFTADSKLEEANALVRSVEEKSLEVEAKLRAVDARLAEVSRKS 650
L+++++ ++ E K + K EE EEK + + + D E K
Sbjct: 99 LEVKESDVKVEEHEKEHKKGKEKKHEELE------EEKEGKKKKNKKEKDESGPEEKNKK 152
Query: 649 SEVERRSKDVEARESSLQRERFSHITEREAEEANLTKQREDLREWERKLQEGEERVAKSQ 470
++ E++ +DV + L+ E ++E +E+ T++++ + E+K +E + +
Sbjct: 153 ADKEKKHEDVSQEKEELEEEDGKKNKKKEKDESG-TEEKKKKPKKEKKQKEESKSNEDKK 211
Query: 469 MIVKQREDRANESDKIIKQKGKELEEAQKKIDA--ANLALKKKEDISSRIKALALREQET 296
+ K+ + + +K ++K KE +E +++ + KK++D S + ++E
Sbjct: 212 VKGKKEKGEKGDLEKEDEEKKKEHDETDQEMKEKDSKKNKKKEKDESCAEEKKKKPDKEK 271
Query: 295 DVLKKSIETKERELLALQEKLDAREKVAVQQLIDEHKAKLEAKEREFEMEMEQKRKSVDD 116
+S E ++++L + K + EK + EH A + + E E K+K D
Sbjct: 272 KEKDESTEKEDKKLKGKKGKGEKPEKEDEGKKTKEHDATEQEMDDEAADHKEGKKKKNKD 331
Query: 115 SLRSKVAEV-EKREAEWKHMEEKVAKREQALERKLEK 8
+ K + E E E K ++ + +Q +K EK
Sbjct: 332 KAKKKETVIDEVCEKETKDKDDDEGETKQKKNKKKEK 368
>TAIR9_protein||AT1G20920.1 | Symbols: | DEAD box RNA helicase, putative |
chr1:7285342-7288842 FORWARD
Length = 1167
Score = 53 bits (125), Expect = 5e-007
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 14/192 (7%)
Frame = -3
Query: 559 EEANLTKQREDL-REWERKLQEGEER-----VAKSQMIVKQREDRANESDKIIKQKGKEL 398
EEA+L K R D R ERK +G E+ K ++ ED + D ++K KE
Sbjct: 18 EEADLKKSRRDRDRSNERKKDKGSEKRREKDRRKKRVKSSDSEDDYDRDDDEEREKRKEK 77
Query: 397 EEAQKKIDAANLALKKKEDISSRIKALALREQETDVLKKSIETKERELLALQEKLDAREK 218
E +++ D + + + SS + E E D K+ + KER +E R K
Sbjct: 78 ERERRRRDKDRVKRRSERRKSSDSEDDVEEEDERD--KRRVNEKER---GHREHERDRGK 132
Query: 217 VAVQQLIDEHKAKLEAKEREFEMEMEQKRKSVDDSLRSKVAEVEKREAEWKHMEEKVAKR 38
+ D + + + KERE E + E++ + ++ + +V E E+RE E + + ++
Sbjct: 133 ---DRKRDREREERKDKEREREKDRERREREREEREKERVKERERREREDGERDRREREK 189
Query: 37 EQALERKLEKHK 2
E+ R E+ +
Sbjct: 190 ERGSRRNRERER 201
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,261,805,774
Number of Sequences: 33410
Number of Extensions: 1261805774
Number of Successful Extensions: 47975855
Number of sequences better than 0.0: 0
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