BLASTX 7.6.2
Query= UN01043 /QuerySize=754
(753 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9ZUU4|ROC1_ARATH Ribonucleoprotein At2g37220, chloroplastic ... 197 7e-050
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=... 171 4e-042
sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=... 153 2e-036
sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic O... 152 3e-036
sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=... 140 1e-032
sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic O... 139 2e-032
sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=... 109 3e-023
sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=... 108 6e-023
sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=... 107 1e-022
sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=... 101 7e-021
sp|P49310|GRP1_SINAL Glycine-rich RNA-binding protein GRP1A OS=S... 92 3e-018
sp|Q03250|GRP7_ARATH Glycine-rich RNA-binding protein 7 OS=Arabi... 91 7e-018
sp|P49311|GRP2_SINAL Glycine-rich RNA-binding protein GRP2A OS=S... 88 6e-017
sp|Q43472|GRP_HORVU Glycine-rich RNA-binding protein blt801 OS=H... 87 8e-017
sp|Q99070|GRP2_SORBI Glycine-rich RNA-binding protein 2 OS=Sorgh... 87 1e-016
sp|P10979|GRPA_MAIZE Glycine-rich RNA-binding, abscisic acid-ind... 86 3e-016
sp|Q03878|GRP1_DAUCA Glycine-rich RNA-binding protein OS=Daucus ... 85 4e-016
sp|Q05966|GRP10_BRANA Glycine-rich RNA-binding protein 10 OS=Bra... 83 2e-015
sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitocho... 83 2e-015
sp|Q03251|GRP8_ARATH Glycine-rich RNA-binding protein 8 OS=Arabi... 82 3e-015
>sp|Q9ZUU4|ROC1_ARATH Ribonucleoprotein At2g37220, chloroplastic OS=Arabidopsis
thaliana GN=At2g37220 PE=1 SV=1
Length = 289
Score = 197 bits (500), Expect = 7e-050
Identities = 95/104 (91%), Positives = 101/104 (97%)
Frame = -1
Query: 576 GSSGSGYGGGGGGGAGSGNRVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSK 397
GSSGSGYGGGGG GAGSGNRVYVGNLSWGVDDMALESLF EQGKV EARVIYDRDSGRSK
Sbjct: 186 GSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSK 245
Query: 396 GFGFVTYNSAQEVQNAIRNLNGADLDGRQIRVSEAEARPPRRQF 265
GFGFVTY+S+QEVQNAI++L+GADLDGRQIRVSEAEARPPRRQ+
Sbjct: 246 GFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPPRRQY 289
>sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis
thaliana GN=RBP29 PE=1 SV=2
Length = 342
Score = 171 bits (433), Expect = 4e-042
Identities = 84/102 (82%), Positives = 90/102 (88%)
Frame = -1
Query: 570 SGSGYGGGGGGGAGSGNRVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGF 391
S G G G G G+GSGNR+YVGNLSWGVDDMALE+LF EQGKV EARVIYDRDSGRSKGF
Sbjct: 241 SSYGSGSGSGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGF 300
Query: 390 GFVTYNSAQEVQNAIRNLNGADLDGRQIRVSEAEARPPRRQF 265
GFVT +S+QEVQ AI +LNGADLDGRQIRVSEAEARPPR QF
Sbjct: 301 GFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPRGQF 342
>sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
plumbaginifolia PE=2 SV=1
Length = 279
Score = 153 bits (384), Expect = 2e-036
Identities = 77/109 (70%), Positives = 88/109 (80%), Gaps = 1/109 (0%)
Frame = -1
Query: 591 SSTEEGSSGSGYGGGGGGGAGSGNRVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRD 412
SS E SS G G GGG S NRVYVGNL+WGVD ALE+LF EQGKV +A+V+YDRD
Sbjct: 172 SSFRENSSFRG-GSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRD 230
Query: 411 SGRSKGFGFVTYNSAQEVQNAIRNLNGADLDGRQIRVSEAEARPPRRQF 265
SGRS+GFGFVTY+SA+EV NAI +L+G DL+GR IRVS AEARPPRRQF
Sbjct: 231 SGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPRRQF 279
>sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana
sylvestris PE=2 SV=1
Length = 273
Score = 152 bits (383), Expect = 3e-036
Identities = 76/110 (69%), Positives = 87/110 (79%), Gaps = 1/110 (0%)
Frame = -1
Query: 594 PSSTEEGSSGSGYGGGGGGGAGSGNRVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDR 415
P E SS G G GGG S NRVYVGNL+WGVD ALE+LF EQGKV +A+V+YDR
Sbjct: 165 PPEKRENSSFRG-GSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDR 223
Query: 414 DSGRSKGFGFVTYNSAQEVQNAIRNLNGADLDGRQIRVSEAEARPPRRQF 265
DSGRS+GFGFVTY+SA+EV NAI +L+G DL+GR IRVS AEARPPRRQF
Sbjct: 224 DSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPRRQF 273
>sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
plumbaginifolia PE=2 SV=1
Length = 292
Score = 140 bits (351), Expect = 1e-032
Identities = 69/103 (66%), Positives = 82/103 (79%), Gaps = 1/103 (0%)
Frame = -1
Query: 579 EGSSGSGYGGGGGGGAGSGNRVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRS 400
+G+S G G GG S NRVYVGNLSWGVDD+AL+ LF EQG V +A+V+YDRDSGRS
Sbjct: 190 DGNSSFG-GARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRS 248
Query: 399 KGFGFVTYNSAQEVQNAIRNLNGADLDGRQIRVSEAEARPPRR 271
+GFGFVTY+SA+EV +AI +LNG DLDGR IRVS AE RP R+
Sbjct: 249 RGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRVSAAEERPRRQ 291
>sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana
sylvestris PE=2 SV=1
Length = 291
Score = 139 bits (349), Expect = 2e-032
Identities = 68/103 (66%), Positives = 82/103 (79%), Gaps = 1/103 (0%)
Frame = -1
Query: 579 EGSSGSGYGGGGGGGAGSGNRVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRS 400
+G+S G G GG S NRVYVGNLSWGVDD+AL+ LF EQG V +A+V+YDRDSGRS
Sbjct: 189 DGNSSFG-GARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRS 247
Query: 399 KGFGFVTYNSAQEVQNAIRNLNGADLDGRQIRVSEAEARPPRR 271
+GFGFVTY+S++EV +AI +LNG DLDGR IRVS AE RP R+
Sbjct: 248 RGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIRVSAAEERPRRQ 290
>sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis
thaliana GN=RBP31 PE=1 SV=1
Length = 329
Score = 109 bits (271), Expect = 3e-023
Identities = 52/85 (61%), Positives = 64/85 (75%)
Frame = -1
Query: 519 RVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRN 340
RVYVGNL W VD+ LE LF E GKV EARV+YDR++GRS+GFGFVT + E+ AI
Sbjct: 245 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISA 304
Query: 339 LNGADLDGRQIRVSEAEARPPRRQF 265
L+G +L+GR IRV+ AE RPPRR +
Sbjct: 305 LDGQNLEGRAIRVNVAEERPPRRGY 329
>sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
sylvestris PE=1 SV=1
Length = 315
Score = 108 bits (268), Expect = 6e-023
Identities = 51/85 (60%), Positives = 62/85 (72%)
Frame = -1
Query: 519 RVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRN 340
R+YVGN+ WG+DD LE LF E GKV ARV+YDR++GRS+GFGFVT S E+ +AI N
Sbjct: 231 RIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIAN 290
Query: 339 LNGADLDGRQIRVSEAEARPPRRQF 265
L+G LDGR IRV+ AE R R F
Sbjct: 291 LDGQSLDGRTIRVNVAEDRSRRNTF 315
>sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
sylvestris PE=1 SV=1
Length = 276
Score = 107 bits (265), Expect = 1e-022
Identities = 49/85 (57%), Positives = 62/85 (72%)
Frame = -1
Query: 519 RVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRN 340
R+YVGN+ W +DD LE +F E GKV ARV++DR+SGRS+GFGFVT +S E+ AI N
Sbjct: 192 RIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIAN 251
Query: 339 LNGADLDGRQIRVSEAEARPPRRQF 265
L+G LDGR IRV+ AE RP R +
Sbjct: 252 LDGQTLDGRTIRVNAAEERPRRNTY 276
>sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia
oleracea PE=1 SV=1
Length = 233
Score = 101 bits (250), Expect = 7e-021
Identities = 50/82 (60%), Positives = 59/82 (71%)
Frame = -1
Query: 519 RVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRN 340
RVYVGNL W VD LE LF E GKV ARV+ DR++GRS+GFGFVT +S EV +AI
Sbjct: 150 RVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAA 209
Query: 339 LNGADLDGRQIRVSEAEARPPR 274
L+G LDGR +RV+ AE RP R
Sbjct: 210 LDGQTLDGRAVRVNVAEERPRR 231
>sp|P49310|GRP1_SINAL Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba
PE=2 SV=1
Length = 166
Score = 92 bits (227), Expect = 3e-018
Identities = 39/79 (49%), Positives = 60/79 (75%)
Frame = -1
Query: 519 RVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRN 340
R +VG L+W DD ALE+ F + G+V ++++I DR++GRS+GFGFVT+ + +++AI
Sbjct: 9 RCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68
Query: 339 LNGADLDGRQIRVSEAEAR 283
+NG DLDGR I V+EA++R
Sbjct: 69 MNGQDLDGRSITVNEAQSR 87
>sp|Q03250|GRP7_ARATH Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana
GN=GRP7 PE=1 SV=1
Length = 176
Score = 91 bits (224), Expect = 7e-018
Identities = 39/79 (49%), Positives = 59/79 (74%)
Frame = -1
Query: 519 RVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRN 340
R +VG L+W DD ALE+ F + G V ++++I DR++GRS+GFGFVT+ + +++AI
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68
Query: 339 LNGADLDGRQIRVSEAEAR 283
+NG DLDGR I V+EA++R
Sbjct: 69 MNGQDLDGRSITVNEAQSR 87
>sp|P49311|GRP2_SINAL Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba
PE=2 SV=1
Length = 169
Score = 88 bits (216), Expect = 6e-017
Identities = 36/79 (45%), Positives = 60/79 (75%)
Frame = -1
Query: 519 RVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRN 340
R +VG L+W D+ +LE+ F + G++ ++++I DR++GRS+GFGFVT+ + +++AI
Sbjct: 9 RCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68
Query: 339 LNGADLDGRQIRVSEAEAR 283
+NG DLDGR I V+EA++R
Sbjct: 69 MNGQDLDGRSITVNEAQSR 87
>sp|Q43472|GRP_HORVU Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare
GN=blt801 PE=1 SV=1
Length = 161
Score = 87 bits (215), Expect = 8e-017
Identities = 38/79 (48%), Positives = 58/79 (73%)
Frame = -1
Query: 519 RVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRN 340
R +VG L W DD +L++ F + G V ++++I DR++GRS+GFGFVT+ S + ++ AI
Sbjct: 7 RCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66
Query: 339 LNGADLDGRQIRVSEAEAR 283
+NG DLDGR I V+EA++R
Sbjct: 67 MNGQDLDGRNITVNEAQSR 85
>sp|Q99070|GRP2_SORBI Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor
GN=GRP2 PE=2 SV=1
Length = 168
Score = 87 bits (213), Expect = 1e-016
Identities = 38/79 (48%), Positives = 59/79 (74%)
Frame = -1
Query: 519 RVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRN 340
R +VG L+W ++ LE F G+V +++VI DR++GRS+GFGFVT++S Q + +AI N
Sbjct: 9 RCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIEN 68
Query: 339 LNGADLDGRQIRVSEAEAR 283
+NG +LDGR I V++A++R
Sbjct: 69 MNGKELDGRNITVNQAQSR 87
>sp|P10979|GRPA_MAIZE Glycine-rich RNA-binding, abscisic acid-inducible protein
OS=Zea mays GN=RAB15 PE=1 SV=1
Length = 157
Score = 86 bits (210), Expect = 3e-016
Identities = 36/79 (45%), Positives = 59/79 (74%)
Frame = -1
Query: 519 RVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRN 340
R +VG L+W + +LE+ F G++ +++VI DR++GRS+GFGFVT++S + +AI N
Sbjct: 9 RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68
Query: 339 LNGADLDGRQIRVSEAEAR 283
+NG +LDGR I V++A++R
Sbjct: 69 MNGKELDGRNITVNQAQSR 87
>sp|Q03878|GRP1_DAUCA Glycine-rich RNA-binding protein OS=Daucus carota PE=2
SV=1
Length = 157
Score = 85 bits (209), Expect = 4e-016
Identities = 35/79 (44%), Positives = 58/79 (73%)
Frame = -1
Query: 519 RVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRN 340
R +VG L+W +D +LE F + G + ++++I DR++GRS+GFGFVT+ + +++AI
Sbjct: 7 RCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEG 66
Query: 339 LNGADLDGRQIRVSEAEAR 283
+NG +LDGR I V+EA++R
Sbjct: 67 MNGQELDGRNITVNEAQSR 85
>sp|Q05966|GRP10_BRANA Glycine-rich RNA-binding protein 10 OS=Brassica napus
GN=GRP10 PE=2 SV=1
Length = 169
Score = 83 bits (204), Expect = 2e-015
Identities = 36/79 (45%), Positives = 57/79 (72%)
Frame = -1
Query: 519 RVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRN 340
R +VG L+W D LE F + G+V ++++I DR++GRS+GFGFVT+ + +++AI
Sbjct: 7 RCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDE 66
Query: 339 LNGADLDGRQIRVSEAEAR 283
+NG +LDGR I V+EA++R
Sbjct: 67 MNGKELDGRTITVNEAQSR 85
>sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitochondrial
OS=Arabidopsis thaliana GN=GRP2 PE=1 SV=1
Length = 158
Score = 83 bits (203), Expect = 2e-015
Identities = 37/80 (46%), Positives = 53/80 (66%)
Frame = -1
Query: 519 RVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRN 340
++++G LSWG DD +L F G V +A+VI DR++GRS+GFGFV +N AI
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 339 LNGADLDGRQIRVSEAEARP 280
++G +L+GR IRV+ A RP
Sbjct: 96 MDGKELNGRHIRVNPANDRP 115
>sp|Q03251|GRP8_ARATH Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana
GN=GRP8 PE=1 SV=1
Length = 169
Score = 82 bits (202), Expect = 3e-015
Identities = 36/79 (45%), Positives = 57/79 (72%)
Frame = -1
Query: 519 RVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRN 340
R +VG L+W +D L+ F + G V ++++I DR+SGRS+GFGFVT+ + +++AI
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 339 LNGADLDGRQIRVSEAEAR 283
+NG +LDGR I V+EA++R
Sbjct: 67 MNGKELDGRVITVNEAQSR 85
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,106,165,710
Number of Sequences: 518415
Number of Extensions: 6106165710
Number of Successful Extensions: 55409465
Number of sequences better than 0.0: 0
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