BLASTX 7.6.2
Query= UN01043 /QuerySize=754
(753 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotei... 198 5e-051
TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding /... 172 3e-043
TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding /... 172 3e-043
TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRB... 109 2e-024
TAIR9_protein||AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP... 91 7e-019
TAIR9_protein||AT2G21660.2 | Symbols: ATGRP7, CCR2 | CCR2 (COLD,... 91 7e-019
TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotei... 91 7e-019
TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 87 1e-017
TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 87 1e-017
TAIR9_protein||AT3G52380.1 | Symbols: CP33, PDE322 | CP33; RNA b... 85 4e-017
TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR... 83 2e-016
TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 83 2e-016
TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 83 2e-016
TAIR9_protein||AT4G13850.4 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 83 2e-016
TAIR9_protein||AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP... 82 2e-016
TAIR9_protein||AT4G39260.2 | Symbols: CCR1, ATGRP8, GRP8 | GR-RB... 82 2e-016
TAIR9_protein||AT4G39260.3 | Symbols: CCR1, ATGRP8, GRP8 | GR-RB... 82 2e-016
TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotei... 81 5e-016
>TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr2:15634980-15636331
REVERSE
Length = 290
Score = 198 bits (501), Expect = 5e-051
Identities = 95/105 (90%), Positives = 101/105 (96%)
Frame = -1
Query: 576 GSSGSGYGGGGGGGAGSGNRVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSK 397
GSSGSGYGGGGG GAGSGNRVYVGNLSWGVDDMALESLF EQGKV EARVIYDRDSGRSK
Sbjct: 186 GSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSK 245
Query: 396 GFGFVTYNSAQEVQNAIRNLNGADLDGRQIRVSEAEARPPRRQF* 262
GFGFVTY+S+QEVQNAI++L+GADLDGRQIRVSEAEARPPRRQ+*
Sbjct: 246 GFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPPRRQY* 290
Score = 79 bits (193), Expect = 3e-015
Identities = 40/84 (47%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Frame = -1
Query: 519 RVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRN 340
+++VGNL + VD L LF G V VIYD+ +GRS+GFGFVT +S EV+ A +
Sbjct: 92 KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQ 151
Query: 339 LNGADLDGRQIRVSEAEARPPRRQ 268
NG +LDGR +RV+ A PP+R+
Sbjct: 152 FNGYELDGRPLRVN-AGPPPPKRE 174
>TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 172 bits (434), Expect = 3e-043
Identities = 84/103 (81%), Positives = 90/103 (87%)
Frame = -1
Query: 570 SGSGYGGGGGGGAGSGNRVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGF 391
S G G G G G+GSGNR+YVGNLSWGVDDMALE+LF EQGKV EARVIYDRDSGRSKGF
Sbjct: 241 SSYGSGSGSGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGF 300
Query: 390 GFVTYNSAQEVQNAIRNLNGADLDGRQIRVSEAEARPPRRQF* 262
GFVT +S+QEVQ AI +LNGADLDGRQIRVSEAEARPPR QF*
Sbjct: 301 GFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPRGQF* 343
Score = 78 bits (190), Expect = 6e-015
Identities = 39/84 (46%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = -1
Query: 519 RVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRN 340
+++VGNLS+ VD L LF G V VIYD+ +GRS+GFGFVT ++A EV+ A +
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159
Query: 339 LNGADLDGRQIRVSEAEARPPRRQ 268
NG + +GR +RV+ A PP+R+
Sbjct: 160 FNGYEFEGRPLRVN-AGPPPPKRE 182
>TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 172 bits (434), Expect = 3e-043
Identities = 84/103 (81%), Positives = 90/103 (87%)
Frame = -1
Query: 570 SGSGYGGGGGGGAGSGNRVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGF 391
S G G G G G+GSGNR+YVGNLSWGVDDMALE+LF EQGKV EARVIYDRDSGRSKGF
Sbjct: 241 SSYGSGSGSGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGF 300
Query: 390 GFVTYNSAQEVQNAIRNLNGADLDGRQIRVSEAEARPPRRQF* 262
GFVT +S+QEVQ AI +LNGADLDGRQIRVSEAEARPPR QF*
Sbjct: 301 GFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPRGQF* 343
>TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRBP33 | RBP31
(31-KDA RNA BINDING PROTEIN); RNA binding / poly(U) binding |
chr4:12766223-12767952 REVERSE
Length = 330
Score = 109 bits (272), Expect = 2e-024
Identities = 52/86 (60%), Positives = 64/86 (74%)
Frame = -1
Query: 519 RVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRN 340
RVYVGNL W VD+ LE LF E GKV EARV+YDR++GRS+GFGFVT + E+ AI
Sbjct: 245 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISA 304
Query: 339 LNGADLDGRQIRVSEAEARPPRRQF* 262
L+G +L+GR IRV+ AE RPPRR +*
Sbjct: 305 LDGQNLEGRAIRVNVAEERPPRRGY* 330
>TAIR9_protein||AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP7 | CCR2 (COLD,
CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr2:9265477-9266316 REVERSE
Length = 177
Score = 91 bits (224), Expect = 7e-019
Identities = 39/79 (49%), Positives = 59/79 (74%)
Frame = -1
Query: 519 RVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRN 340
R +VG L+W DD ALE+ F + G V ++++I DR++GRS+GFGFVT+ + +++AI
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68
Query: 339 LNGADLDGRQIRVSEAEAR 283
+NG DLDGR I V+EA++R
Sbjct: 69 MNGQDLDGRSITVNEAQSR 87
>TAIR9_protein||AT2G21660.2 | Symbols: ATGRP7, CCR2 | CCR2 (COLD, CIRCADIAN
RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr2:9265477-9266316 REVERSE
Length = 160
Score = 91 bits (224), Expect = 7e-019
Identities = 39/79 (49%), Positives = 59/79 (74%)
Frame = -1
Query: 519 RVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRN 340
R +VG L+W DD ALE+ F + G V ++++I DR++GRS+GFGFVT+ + +++AI
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68
Query: 339 LNGADLDGRQIRVSEAEAR 283
+NG DLDGR I V+EA++R
Sbjct: 69 MNGQDLDGRSITVNEAQSR 87
>TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein RNP-T, putative / RNA-binding protein
1/2/3, putative / RNA-binding protein cp31, putative |
chr5:20452677-20453965 REVERSE
Length = 290
Score = 91 bits (224), Expect = 7e-019
Identities = 45/82 (54%), Positives = 58/82 (70%)
Frame = -1
Query: 519 RVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRN 340
R+YVGNL W VD LE LF E GKV +ARV+ DR++GRS+GFGFV ++ EV AI
Sbjct: 208 RIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAIAA 267
Query: 339 LNGADLDGRQIRVSEAEARPPR 274
L+G +L+GR I+V+ AE R R
Sbjct: 268 LDGQNLEGRAIKVNVAEERTRR 289
>TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 87 bits (214), Expect = 1e-017
Identities = 42/88 (47%), Positives = 61/88 (69%), Gaps = 2/88 (2%)
Frame = -1
Query: 522 NRVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIR 343
++++VG LSWG DD +L+ F G+V EA VI DR++GRS+GFGFV+++ NAI+
Sbjct: 35 SKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIK 94
Query: 342 NLNGADLDGRQIRVSEAEAR--PPRRQF 265
++G +L+GRQIRV+ A R PR F
Sbjct: 95 EMDGKELNGRQIRVNLATERSSAPRSSF 122
>TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 87 bits (214), Expect = 1e-017
Identities = 42/88 (47%), Positives = 61/88 (69%), Gaps = 2/88 (2%)
Frame = -1
Query: 522 NRVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIR 343
++++VG LSWG DD +L+ F G+V EA VI DR++GRS+GFGFV+++ NAI+
Sbjct: 35 SKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIK 94
Query: 342 NLNGADLDGRQIRVSEAEAR--PPRRQF 265
++G +L+GRQIRV+ A R PR F
Sbjct: 95 EMDGKELNGRQIRVNLATERSSAPRSSF 122
>TAIR9_protein||AT3G52380.1 | Symbols: CP33, PDE322 | CP33; RNA binding |
chr3:19421619-19422855 FORWARD
Length = 330
Score = 85 bits (209), Expect = 4e-017
Identities = 36/82 (43%), Positives = 59/82 (71%)
Frame = -1
Query: 528 SGNRVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGFGFVTYNSAQEVQNA 349
S ++VY GNL W + L+ FG+Q V A+VIY+R++GRS+GFGF+++ SA+ VQ+A
Sbjct: 217 SPHKVYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSA 276
Query: 348 IRNLNGADLDGRQIRVSEAEAR 283
+ +NG +++GR +R++ A R
Sbjct: 277 LATMNGVEVEGRALRLNLASER 298
>TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR-RBP2
(GLYCINE-RICH RNA-BINDING PROTEIN 2); ATP binding / RNA binding /
double-stranded DNA binding / single-stranded DNA binding |
chr4:8021314-8022065 FORWARD
Length = 159
Score = 83 bits (203), Expect = 2e-016
Identities = 37/80 (46%), Positives = 53/80 (66%)
Frame = -1
Query: 519 RVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRN 340
++++G LSWG DD +L F G V +A+VI DR++GRS+GFGFV +N AI
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 339 LNGADLDGRQIRVSEAEARP 280
++G +L+GR IRV+ A RP
Sbjct: 96 MDGKELNGRHIRVNPANDRP 115
>TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 154
Score = 83 bits (203), Expect = 2e-016
Identities = 37/80 (46%), Positives = 53/80 (66%)
Frame = -1
Query: 519 RVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRN 340
++++G LSWG DD +L F G V +A+VI DR++GRS+GFGFV +N AI
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 339 LNGADLDGRQIRVSEAEARP 280
++G +L+GR IRV+ A RP
Sbjct: 96 MDGKELNGRHIRVNPANDRP 115
>TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 145
Score = 83 bits (203), Expect = 2e-016
Identities = 37/80 (46%), Positives = 53/80 (66%)
Frame = -1
Query: 519 RVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRN 340
++++G LSWG DD +L F G V +A+VI DR++GRS+GFGFV +N AI
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 339 LNGADLDGRQIRVSEAEARP 280
++G +L+GR IRV+ A RP
Sbjct: 96 MDGKELNGRHIRVNPANDRP 115
>TAIR9_protein||AT4G13850.4 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 130
Score = 83 bits (203), Expect = 2e-016
Identities = 37/80 (46%), Positives = 53/80 (66%)
Frame = -1
Query: 519 RVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRN 340
++++G LSWG DD +L F G V +A+VI DR++GRS+GFGFV +N AI
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 339 LNGADLDGRQIRVSEAEARP 280
++G +L+GR IRV+ A RP
Sbjct: 96 MDGKELNGRHIRVNPANDRP 115
>TAIR9_protein||AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | GR-RBP8;
RNA binding / nucleic acid binding / nucleotide binding |
chr4:18274166-18274958 REVERSE
Length = 170
Score = 82 bits (202), Expect = 2e-016
Identities = 36/79 (45%), Positives = 57/79 (72%)
Frame = -1
Query: 519 RVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRN 340
R +VG L+W +D L+ F + G V ++++I DR+SGRS+GFGFVT+ + +++AI
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 339 LNGADLDGRQIRVSEAEAR 283
+NG +LDGR I V+EA++R
Sbjct: 67 MNGKELDGRVITVNEAQSR 85
>TAIR9_protein||AT4G39260.2 | Symbols: CCR1, ATGRP8, GRP8 | GR-RBP8; RNA binding
/ nucleic acid binding / nucleotide binding | chr4:18274166-18274958
REVERSE
Length = 127
Score = 82 bits (202), Expect = 2e-016
Identities = 36/79 (45%), Positives = 57/79 (72%)
Frame = -1
Query: 519 RVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRN 340
R +VG L+W +D L+ F + G V ++++I DR+SGRS+GFGFVT+ + +++AI
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 339 LNGADLDGRQIRVSEAEAR 283
+NG +LDGR I V+EA++R
Sbjct: 67 MNGKELDGRVITVNEAQSR 85
>TAIR9_protein||AT4G39260.3 | Symbols: CCR1, ATGRP8, GRP8 | GR-RBP8; RNA binding
/ nucleic acid binding / nucleotide binding | chr4:18274166-18274958
REVERSE
Length = 93
Score = 82 bits (202), Expect = 2e-016
Identities = 36/79 (45%), Positives = 57/79 (72%)
Frame = -1
Query: 519 RVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRN 340
R +VG L+W +D L+ F + G V ++++I DR+SGRS+GFGFVT+ + +++AI
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 339 LNGADLDGRQIRVSEAEAR 283
+NG +LDGR I V+EA++R
Sbjct: 67 MNGKELDGRVITVNEAQSR 85
>TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr1:22093678-22094540
REVERSE
Length = 259
Score = 81 bits (199), Expect = 5e-016
Identities = 37/80 (46%), Positives = 58/80 (72%)
Frame = -1
Query: 522 NRVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIR 343
++++VGNLSW V +L F E G V ARV++D D+GRS+G+GFV Y+S E++ A+
Sbjct: 177 HKLFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYSSKAEMETALE 236
Query: 342 NLNGADLDGRQIRVSEAEAR 283
+L+G +L+GR IRV+ A+ +
Sbjct: 237 SLDGFELEGRAIRVNLAQGK 256
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,261,805,774
Number of Sequences: 33410
Number of Extensions: 1261805774
Number of Successful Extensions: 47975855
Number of sequences better than 0.0: 0
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