BLASTX 7.6.2
Query= UN01181 /QuerySize=616
(615 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G43410.1 | Symbols: FPA | FPA; RNA binding | c... 151 4e-037
TAIR9_protein||AT2G43410.2 | Symbols: FPA | FPA; RNA binding | c... 151 4e-037
TAIR9_protein||AT2G43410.3 | Symbols: FPA | FPA; RNA binding | c... 151 4e-037
TAIR9_protein||AT2G43410.4 | Symbols: FPA | FPA; RNA binding | c... 151 4e-037
TAIR9_protein||AT4G12640.1 | Symbols: | RNA recognition motif (... 63 1e-010
TAIR9_protein||AT5G54580.1 | Symbols: | RNA recognition motif (... 50 7e-007
TAIR9_protein||AT5G64200.1 | Symbols: ATSC35, SC35 | ATSC35; RNA... 50 1e-006
TAIR9_protein||AT5G64200.2 | Symbols: ATSC35, SC35 | ATSC35; RNA... 50 1e-006
TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine... 50 1e-006
TAIR9_protein||AT2G42890.1 | Symbols: AML2 | AML2 (ARABIDOPSIS-M... 47 6e-006
TAIR9_protein||AT2G42890.2 | Symbols: AML2 | AML2 (ARABIDOPSIS-M... 47 6e-006
TAIR9_protein||AT2G42890.3 | Symbols: AML2 | AML2 (ARABIDOPSIS-M... 47 6e-006
>TAIR9_protein||AT2G43410.1 | Symbols: FPA | FPA; RNA binding |
chr2:18026397-18030989 REVERSE
Length = 859
Score = 151 bits (380), Expect = 4e-037
Identities = 74/90 (82%), Positives = 81/90 (90%), Gaps = 3/90 (3%)
Frame = +2
Query: 215 AMKPFRGRESDDSGFTSNNLWVGSITMDTTESDLTELFGRFGDIDRITAYSSRGFAFIYY 394
+MKPFR +DDSGF SNNLWVGS+T +TTESDLTELFGR+GDIDRIT YSSRGFAFIYY
Sbjct: 4 SMKPFR---ADDSGFQSNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYY 60
Query: 395 RHVEEAVAAMEALQGANLNGGLLKIQYARP 484
RHVEEAVAA EALQGANLNG +KI+YARP
Sbjct: 61 RHVEEAVAAKEALQGANLNGSQIKIEYARP 90
>TAIR9_protein||AT2G43410.2 | Symbols: FPA | FPA; RNA binding |
chr2:18026397-18030989 REVERSE
Length = 902
Score = 151 bits (380), Expect = 4e-037
Identities = 74/90 (82%), Positives = 81/90 (90%), Gaps = 3/90 (3%)
Frame = +2
Query: 215 AMKPFRGRESDDSGFTSNNLWVGSITMDTTESDLTELFGRFGDIDRITAYSSRGFAFIYY 394
+MKPFR +DDSGF SNNLWVGS+T +TTESDLTELFGR+GDIDRIT YSSRGFAFIYY
Sbjct: 4 SMKPFR---ADDSGFQSNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYY 60
Query: 395 RHVEEAVAAMEALQGANLNGGLLKIQYARP 484
RHVEEAVAA EALQGANLNG +KI+YARP
Sbjct: 61 RHVEEAVAAKEALQGANLNGSQIKIEYARP 90
>TAIR9_protein||AT2G43410.3 | Symbols: FPA | FPA; RNA binding |
chr2:18026397-18030989 REVERSE
Length = 902
Score = 151 bits (380), Expect = 4e-037
Identities = 74/90 (82%), Positives = 81/90 (90%), Gaps = 3/90 (3%)
Frame = +2
Query: 215 AMKPFRGRESDDSGFTSNNLWVGSITMDTTESDLTELFGRFGDIDRITAYSSRGFAFIYY 394
+MKPFR +DDSGF SNNLWVGS+T +TTESDLTELFGR+GDIDRIT YSSRGFAFIYY
Sbjct: 4 SMKPFR---ADDSGFQSNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYY 60
Query: 395 RHVEEAVAAMEALQGANLNGGLLKIQYARP 484
RHVEEAVAA EALQGANLNG +KI+YARP
Sbjct: 61 RHVEEAVAAKEALQGANLNGSQIKIEYARP 90
>TAIR9_protein||AT2G43410.4 | Symbols: FPA | FPA; RNA binding |
chr2:18026397-18030989 REVERSE
Length = 902
Score = 151 bits (380), Expect = 4e-037
Identities = 74/90 (82%), Positives = 81/90 (90%), Gaps = 3/90 (3%)
Frame = +2
Query: 215 AMKPFRGRESDDSGFTSNNLWVGSITMDTTESDLTELFGRFGDIDRITAYSSRGFAFIYY 394
+MKPFR +DDSGF SNNLWVGS+T +TTESDLTELFGR+GDIDRIT YSSRGFAFIYY
Sbjct: 4 SMKPFR---ADDSGFQSNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYY 60
Query: 395 RHVEEAVAAMEALQGANLNGGLLKIQYARP 484
RHVEEAVAA EALQGANLNG +KI+YARP
Sbjct: 61 RHVEEAVAAKEALQGANLNGSQIKIEYARP 90
>TAIR9_protein||AT4G12640.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:7462697-7467630 FORWARD
Length = 824
Score = 63 bits (151), Expect = 1e-010
Identities = 28/73 (38%), Positives = 48/73 (65%)
Frame = +2
Query: 263 SNNLWVGSITMDTTESDLTELFGRFGDIDRITAYSSRGFAFIYYRHVEEAVAAMEALQGA 442
S +LWVG++ E +L + F RFG+++ + R +AF+ + H E+A AA+E+LQG
Sbjct: 22 SRHLWVGNLPHGILERELADRFLRFGELESLAFQPGRSYAFVNFNHDEDAFAAIESLQGF 81
Query: 443 NLNGGLLKIQYAR 481
L+G L+I++A+
Sbjct: 82 PLSGNPLRIEFAK 94
>TAIR9_protein||AT5G54580.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:22171332-22172656 FORWARD
Length = 157
Score = 50 bits (119), Expect = 7e-007
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Frame = +2
Query: 263 SNNLWVGSITMDTTESDLTELFGRFGDI-------DRITAYSSRGFAFIYYRHVEEAVAA 421
S NL+V ++ TT L F +FG++ DR++ Y S+GF F+ Y +E++
Sbjct: 55 STNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGY-SKGFGFVRYATLEDSAKG 113
Query: 422 MEALQGANLNGGLLKIQYARP 484
+ + G L+G ++ +YARP
Sbjct: 114 IAGMDGKFLDGWVIFAEYARP 134
>TAIR9_protein||AT5G64200.1 | Symbols: ATSC35, SC35 | ATSC35; RNA binding /
nucleic acid binding / nucleotide binding | chr5:25681849-25683553
REVERSE
Length = 304
Score = 50 bits (118), Expect = 1e-006
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Frame = +2
Query: 233 GRESDDSGFTSNNLWVGSITMDTTESDLTELFGRFGDI-------DRITAYSSRGFAFIY 391
GR + +L V +IT TT DL LF ++G + DR T SRGFAF+
Sbjct: 5 GRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTG-DSRGFAFVR 63
Query: 392 YRHVEEAVAAMEALQGANLNGGLLKIQYAR 481
Y++ +EA A+E L G ++G + +Q+A+
Sbjct: 64 YKYKDEAHKAVERLDGRVVDGREITVQFAK 93
>TAIR9_protein||AT5G64200.2 | Symbols: ATSC35, SC35 | ATSC35; RNA binding /
nucleic acid binding / nucleotide binding | chr5:25681849-25683553
REVERSE
Length = 304
Score = 50 bits (118), Expect = 1e-006
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Frame = +2
Query: 233 GRESDDSGFTSNNLWVGSITMDTTESDLTELFGRFGDI-------DRITAYSSRGFAFIY 391
GR + +L V +IT TT DL LF ++G + DR T SRGFAF+
Sbjct: 5 GRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTG-DSRGFAFVR 63
Query: 392 YRHVEEAVAAMEALQGANLNGGLLKIQYAR 481
Y++ +EA A+E L G ++G + +Q+A+
Sbjct: 64 YKYKDEAHKAVERLDGRVVDGREITVQFAK 93
>TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine-rich
RNA-binding protein 3); ATP binding / RNA binding |
chr5:24560870-24562152 FORWARD
Length = 310
Score = 50 bits (117), Expect = 1e-006
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
Frame = +2
Query: 260 TSNNLWVGSITMDTTESDLTELFGRFGDI-------DRITAYSSRGFAFIYYRHVEEAVA 418
+S+ L++G + E L E F ++G++ DR T SRGF F+ + E A +
Sbjct: 38 SSSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETG-RSRGFGFVTFTSSEAASS 96
Query: 419 AMEALQGANLNGGLLKIQYA 478
A++AL G +L+G ++K+ YA
Sbjct: 97 AIQALDGRDLHGRVVKVNYA 116
>TAIR9_protein||AT2G42890.1 | Symbols: AML2 | AML2 (ARABIDOPSIS-MEI2-LIKE 2);
RNA binding / nucleic acid binding / nucleotide binding |
chr2:17850077-17854205 FORWARD
Length = 844
Score = 47 bits (111), Expect = 6e-006
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +2
Query: 263 SNNLWVGSITMDTTESDLTELFGRFGDIDRI-TAYSSRGFAFIYYRHVEEAVAAMEALQG 439
S L+V +I +S+L+ LF FG+I + TA SRGF I Y + A AAM ALQ
Sbjct: 197 SRTLFVRNINSSVEDSELSALFEPFGEIRSLYTACKSRGFVMISYYDIRAAHAAMRALQN 256
Query: 440 ANLNGGLLKIQYARP 484
L L I ++ P
Sbjct: 257 TLLRKRTLDIHFSIP 271
>TAIR9_protein||AT2G42890.2 | Symbols: AML2 | AML2 (ARABIDOPSIS-MEI2-LIKE 2);
RNA binding / nucleic acid binding / nucleotide binding |
chr2:17850632-17854205 FORWARD
Length = 831
Score = 47 bits (111), Expect = 6e-006
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +2
Query: 263 SNNLWVGSITMDTTESDLTELFGRFGDIDRI-TAYSSRGFAFIYYRHVEEAVAAMEALQG 439
S L+V +I +S+L+ LF FG+I + TA SRGF I Y + A AAM ALQ
Sbjct: 184 SRTLFVRNINSSVEDSELSALFEPFGEIRSLYTACKSRGFVMISYYDIRAAHAAMRALQN 243
Query: 440 ANLNGGLLKIQYARP 484
L L I ++ P
Sbjct: 244 TLLRKRTLDIHFSIP 258
>TAIR9_protein||AT2G42890.3 | Symbols: AML2 | AML2 (ARABIDOPSIS-MEI2-LIKE 2);
RNA binding / nucleic acid binding / nucleotide binding |
chr2:17850632-17854205 FORWARD
Length = 831
Score = 47 bits (111), Expect = 6e-006
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +2
Query: 263 SNNLWVGSITMDTTESDLTELFGRFGDIDRI-TAYSSRGFAFIYYRHVEEAVAAMEALQG 439
S L+V +I +S+L+ LF FG+I + TA SRGF I Y + A AAM ALQ
Sbjct: 184 SRTLFVRNINSSVEDSELSALFEPFGEIRSLYTACKSRGFVMISYYDIRAAHAAMRALQN 243
Query: 440 ANLNGGLLKIQYARP 484
L L I ++ P
Sbjct: 244 TLLRKRTLDIHFSIP 258
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,354,029,543
Number of Sequences: 33410
Number of Extensions: 1354029543
Number of Successful Extensions: 53307450
Number of sequences better than 0.0: 0
|
