BLASTX 7.6.2

Query= UN01239 /QuerySize=1159
        (1158 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT1G54310.1 | Symbols:  | RNA binding | chr1:2027...    333   1e-091
TAIR9_protein||AT1G54310.2 | Symbols:  | RNA binding | chr1:2027...    333   1e-091

>TAIR9_protein||AT1G54310.1 | Symbols:  | RNA binding | chr1:20273618-20274678
        FORWARD

          Length = 246

 Score =  333 bits (853), Expect = 1e-091
 Identities = 182/229 (79%), Positives = 193/229 (84%), Gaps = 17/229 (7%)
 Frame = +3

Query:  24 VVAVGVL-------HLLSSSSSRIVCLSTSSRPPLSAAVAKVVLKKGKTQLFKDVSPMVY 182
           +V +GVL       H L  SSS+I     SSRP     VAKVVLKKGKTQLFKD SPMVY
Sbjct:   1 MVMLGVLQLPCRLHHSLFYSSSQI----ASSRP---QGVAKVVLKKGKTQLFKDGSPMVY 53

Query: 183 SGAVDRIIGKPPPKTGDVVIVADGTENPIGWGLYNSVSMFCVRLMQLQHESTIDPSCALN 362
           SGAVDRIIGKPPP+TGDVVIVADGTENPIGWGLYNSVSMFCVRLMQLQHEST DPSCALN
Sbjct:  54 SGAVDRIIGKPPPQTGDVVIVADGTENPIGWGLYNSVSMFCVRLMQLQHESTRDPSCALN 113

Query: 363 VEKLLQTRITQAVQLRNHLGLPSENNHTNAYRLVNSEGDRLSGLIVDVFGDIAVVASSAA 542
           +EKLLQTRI +AVQLR  L LPS N  TNAYRLVNSEGDRLSGLIVDVFGDIAVVASSAA
Sbjct: 114 IEKLLQTRIAEAVQLRKSLALPSAN--TNAYRLVNSEGDRLSGLIVDVFGDIAVVASSAA 171

Query: 543 WIEKYRNHVEACLRSSVHGINHINWRPSLDLLKEDGFDISSFKLTQSSS 689
           W+EKYR  VE+CLR S+ GINHINWRPSLD+LKEDGFDISS K TQSS+
Sbjct: 172 WLEKYRIEVESCLR-SIDGINHINWRPSLDVLKEDGFDISSLKQTQSST 219

>TAIR9_protein||AT1G54310.2 | Symbols:  | RNA binding | chr1:20273567-20275449
        FORWARD

          Length = 455

 Score =  333 bits (853), Expect = 1e-091
 Identities = 182/229 (79%), Positives = 193/229 (84%), Gaps = 17/229 (7%)
 Frame = +3

Query:  24 VVAVGVL-------HLLSSSSSRIVCLSTSSRPPLSAAVAKVVLKKGKTQLFKDVSPMVY 182
           +V +GVL       H L  SSS+I     SSRP     VAKVVLKKGKTQLFKD SPMVY
Sbjct:  18 MVMLGVLQLPCRLHHSLFYSSSQI----ASSRP---QGVAKVVLKKGKTQLFKDGSPMVY 70

Query: 183 SGAVDRIIGKPPPKTGDVVIVADGTENPIGWGLYNSVSMFCVRLMQLQHESTIDPSCALN 362
           SGAVDRIIGKPPP+TGDVVIVADGTENPIGWGLYNSVSMFCVRLMQLQHEST DPSCALN
Sbjct:  71 SGAVDRIIGKPPPQTGDVVIVADGTENPIGWGLYNSVSMFCVRLMQLQHESTRDPSCALN 130

Query: 363 VEKLLQTRITQAVQLRNHLGLPSENNHTNAYRLVNSEGDRLSGLIVDVFGDIAVVASSAA 542
           +EKLLQTRI +AVQLR  L LPS N  TNAYRLVNSEGDRLSGLIVDVFGDIAVVASSAA
Sbjct: 131 IEKLLQTRIAEAVQLRKSLALPSAN--TNAYRLVNSEGDRLSGLIVDVFGDIAVVASSAA 188

Query: 543 WIEKYRNHVEACLRSSVHGINHINWRPSLDLLKEDGFDISSFKLTQSSS 689
           W+EKYR  VE+CLR S+ GINHINWRPSLD+LKEDGFDISS K TQSS+
Sbjct: 189 WLEKYRIEVESCLR-SIDGINHINWRPSLDVLKEDGFDISSLKQTQSST 236


 Score =  232 bits (591), Expect = 3e-061
 Identities = 115/119 (96%), Positives = 118/119 (99%)
 Frame = +2

Query:  800 VVENGITYAISLEGQKTGFYTDQRENRHFISTISAGKRVLDLCCYSGGFALNAARGGATS 979
            VVENGI+YAISLEGQKTGFYTDQRENRHFISTISAGKRVLDLCCYSGGFALNAARGGATS
Sbjct:  243 VVENGISYAISLEGQKTGFYTDQRENRHFISTISAGKRVLDLCCYSGGFALNAARGGATS 302

Query:  980 VLGIDSSLPALELARENVILNHMDPGKVVFFKQDSTEFMKGALSREETWDIVILDPPKL 1156
            V+GIDSSLPALELARENVILN+MDP KVVFFKQDSTEFMKGALSREETWDIVILDPPKL
Sbjct:  303 VIGIDSSLPALELARENVILNNMDPEKVVFFKQDSTEFMKGALSREETWDIVILDPPKL 361

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,397,935,380
Number of Sequences: 33410
Number of Extensions: 1397935380
Number of Successful Extensions: 53382538
Number of sequences better than 0.0: 0