BLASTX 7.6.2
Query= UN01336 /QuerySize=1593
(1592 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G59060.2 | Symbols: PIL6, PIF5 | PIL6 (PHYTOCH... 706 2e-203
TAIR9_protein||AT3G59060.3 | Symbols: PIL6, PIF5 | PIL6 (PHYTOCH... 706 2e-203
TAIR9_protein||AT3G59060.4 | Symbols: PIL6, PIF5 | PIL6 (PHYTOCH... 706 2e-203
TAIR9_protein||AT3G59060.1 | Symbols: PIL6, PIF5 | PIL6 (PHYTOCH... 705 4e-203
TAIR9_protein||AT2G43010.1 | Symbols: PIF4, SRL2 | PIF4 (phytoch... 259 5e-069
TAIR9_protein||AT2G43010.2 | Symbols: PIF4, SRL2 | PIF4 (phytoch... 259 5e-069
TAIR9_protein||AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | PIF3 (P... 121 1e-027
TAIR9_protein||AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | PIF3 (P... 121 1e-027
TAIR9_protein||AT2G20180.2 | Symbols: PIL5 | PIL5 (PHYTOCHROME I... 116 7e-026
TAIR9_protein||AT2G20180.1 | Symbols: PIL5, PIF1 | PIL5 (PHYTOCH... 116 7e-026
TAIR9_protein||AT4G28811.1 | Symbols: | transcription regulator... 114 3e-025
TAIR9_protein||AT4G36930.1 | Symbols: SPT | SPT (SPATULA); DNA b... 107 2e-023
TAIR9_protein||AT4G28790.1 | Symbols: | basic helix-loop-helix ... 106 6e-023
TAIR9_protein||AT2G46970.1 | Symbols: PIL1 | PIL1 (PHYTOCHROME I... 104 3e-022
>TAIR9_protein||AT3G59060.2 | Symbols: PIL6, PIF5 | PIL6 (PHYTOCHROME
INTERACTING FACTOR 3-LIKE 6); DNA binding / transcription factor |
chr3:21828189-21829895 REVERSE
Length = 445
Score = 706 bits (1820), Expect = 2e-203
Identities = 364/450 (80%), Positives = 389/450 (86%), Gaps = 12/450 (2%)
Frame = -2
Query: 1468 MEQLFSDWNFEDNFHMSSNKRSVRPEDELVELLWRDGQVVLQSQVRREPSVQVQTHKNDQ 1289
MEQ+F+DWNFEDNFHMS+NKRS+RPEDELVELLWRDGQVVLQSQ RREPSVQVQTHK +
Sbjct: 1 MEQVFADWNFEDNFHMSTNKRSIRPEDELVELLWRDGQVVLQSQARREPSVQVQTHK-QE 59
Query: 1288 TLRKPNNALLDNQETIRRPNDNVQGDQETVSWIQYPPEDVVDPFESEFSSHFFSSIDHLD 1109
TLRKPNN LDNQET+++PN DQETVSWIQYPP+DV+DPFESEFSSHFFSSIDHL
Sbjct: 60 TLRKPNNIFLDNQETVQKPNYAALDDQETVSWIQYPPDDVIDPFESEFSSHFFSSIDHLG 119
Query: 1108 GPNHPKKPLTIKETAKPEAKAMAPPKFRPPVVSVGPSHCGSNHSTNDHQVTHPPVSMNAR 929
G P+KP TI+ET K EA+AMAPPKFR V++VGPSHCGSN STN HQ T PVSM+ R
Sbjct: 120 G---PEKPRTIEETVKHEAQAMAPPKFRSSVITVGPSHCGSNQSTNIHQATTLPVSMSDR 176
Query: 928 SKNVEERLDTSSGGSSGCS-----KETESGRSVTISRKRKHAMDTDQESMSQSDVRLMST 764
SKNVEERLDTSSGGSSGCS KET SG SVTI RKRKH MD DQES+SQSD+ L ST
Sbjct: 177 SKNVEERLDTSSGGSSGCSYGRNNKETVSGTSVTIDRKRKHVMDADQESVSQSDIGLTST 236
Query: 763 DDQAMGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILD 584
DDQ MGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCS+TDKASILD
Sbjct: 237 DDQTMGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILD 296
Query: 583 EAIDYLKTLQMQLQVMWMGSGMAAAAAAAATPMMFPGVQSSQYINQMAMQSQMQMPQFPV 404
EAIDYLK+LQMQLQVMWMGSGMAAAAAAAA+PMMFPGVQSS YINQMAMQSQMQ+ QFPV
Sbjct: 297 EAIDYLKSLQMQLQVMWMGSGMAAAAAAAASPMMFPGVQSSPYINQMAMQSQMQLSQFPV 356
Query: 403 MNRPAAQNHPGLVCQNPAVQFQMQAQNQMLSEQLARYMGGFPPM-PATTQTQTV-QQPMD 230
MNR A QNHPGLVCQNP VQ Q+QAQNQ+LSEQLARYMGG P M PA Q QTV QQP D
Sbjct: 357 MNRSAPQNHPGLVCQNP-VQLQLQAQNQILSEQLARYMGGIPQMPPAGNQMQTVQQQPAD 415
Query: 229 MMRFGSQVGQQSQLSTPVTTDSLRMGKTG* 140
M+ FGS G QSQLS P TTDSL MGK G*
Sbjct: 416 MLGFGSPAGPQSQLSAPATTDSLHMGKIG* 445
>TAIR9_protein||AT3G59060.3 | Symbols: PIL6, PIF5 | PIL6 (PHYTOCHROME
INTERACTING FACTOR 3-LIKE 6); DNA binding / transcription factor |
chr3:21828189-21829895 REVERSE
Length = 445
Score = 706 bits (1820), Expect = 2e-203
Identities = 364/450 (80%), Positives = 389/450 (86%), Gaps = 12/450 (2%)
Frame = -2
Query: 1468 MEQLFSDWNFEDNFHMSSNKRSVRPEDELVELLWRDGQVVLQSQVRREPSVQVQTHKNDQ 1289
MEQ+F+DWNFEDNFHMS+NKRS+RPEDELVELLWRDGQVVLQSQ RREPSVQVQTHK +
Sbjct: 1 MEQVFADWNFEDNFHMSTNKRSIRPEDELVELLWRDGQVVLQSQARREPSVQVQTHK-QE 59
Query: 1288 TLRKPNNALLDNQETIRRPNDNVQGDQETVSWIQYPPEDVVDPFESEFSSHFFSSIDHLD 1109
TLRKPNN LDNQET+++PN DQETVSWIQYPP+DV+DPFESEFSSHFFSSIDHL
Sbjct: 60 TLRKPNNIFLDNQETVQKPNYAALDDQETVSWIQYPPDDVIDPFESEFSSHFFSSIDHLG 119
Query: 1108 GPNHPKKPLTIKETAKPEAKAMAPPKFRPPVVSVGPSHCGSNHSTNDHQVTHPPVSMNAR 929
G P+KP TI+ET K EA+AMAPPKFR V++VGPSHCGSN STN HQ T PVSM+ R
Sbjct: 120 G---PEKPRTIEETVKHEAQAMAPPKFRSSVITVGPSHCGSNQSTNIHQATTLPVSMSDR 176
Query: 928 SKNVEERLDTSSGGSSGCS-----KETESGRSVTISRKRKHAMDTDQESMSQSDVRLMST 764
SKNVEERLDTSSGGSSGCS KET SG SVTI RKRKH MD DQES+SQSD+ L ST
Sbjct: 177 SKNVEERLDTSSGGSSGCSYGRNNKETVSGTSVTIDRKRKHVMDADQESVSQSDIGLTST 236
Query: 763 DDQAMGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILD 584
DDQ MGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCS+TDKASILD
Sbjct: 237 DDQTMGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILD 296
Query: 583 EAIDYLKTLQMQLQVMWMGSGMAAAAAAAATPMMFPGVQSSQYINQMAMQSQMQMPQFPV 404
EAIDYLK+LQMQLQVMWMGSGMAAAAAAAA+PMMFPGVQSS YINQMAMQSQMQ+ QFPV
Sbjct: 297 EAIDYLKSLQMQLQVMWMGSGMAAAAAAAASPMMFPGVQSSPYINQMAMQSQMQLSQFPV 356
Query: 403 MNRPAAQNHPGLVCQNPAVQFQMQAQNQMLSEQLARYMGGFPPM-PATTQTQTV-QQPMD 230
MNR A QNHPGLVCQNP VQ Q+QAQNQ+LSEQLARYMGG P M PA Q QTV QQP D
Sbjct: 357 MNRSAPQNHPGLVCQNP-VQLQLQAQNQILSEQLARYMGGIPQMPPAGNQMQTVQQQPAD 415
Query: 229 MMRFGSQVGQQSQLSTPVTTDSLRMGKTG* 140
M+ FGS G QSQLS P TTDSL MGK G*
Sbjct: 416 MLGFGSPAGPQSQLSAPATTDSLHMGKIG* 445
>TAIR9_protein||AT3G59060.4 | Symbols: PIL6, PIF5 | PIL6 (PHYTOCHROME
INTERACTING FACTOR 3-LIKE 6); DNA binding / transcription factor |
chr3:21828189-21829895 REVERSE
Length = 445
Score = 706 bits (1820), Expect = 2e-203
Identities = 364/450 (80%), Positives = 389/450 (86%), Gaps = 12/450 (2%)
Frame = -2
Query: 1468 MEQLFSDWNFEDNFHMSSNKRSVRPEDELVELLWRDGQVVLQSQVRREPSVQVQTHKNDQ 1289
MEQ+F+DWNFEDNFHMS+NKRS+RPEDELVELLWRDGQVVLQSQ RREPSVQVQTHK +
Sbjct: 1 MEQVFADWNFEDNFHMSTNKRSIRPEDELVELLWRDGQVVLQSQARREPSVQVQTHK-QE 59
Query: 1288 TLRKPNNALLDNQETIRRPNDNVQGDQETVSWIQYPPEDVVDPFESEFSSHFFSSIDHLD 1109
TLRKPNN LDNQET+++PN DQETVSWIQYPP+DV+DPFESEFSSHFFSSIDHL
Sbjct: 60 TLRKPNNIFLDNQETVQKPNYAALDDQETVSWIQYPPDDVIDPFESEFSSHFFSSIDHLG 119
Query: 1108 GPNHPKKPLTIKETAKPEAKAMAPPKFRPPVVSVGPSHCGSNHSTNDHQVTHPPVSMNAR 929
G P+KP TI+ET K EA+AMAPPKFR V++VGPSHCGSN STN HQ T PVSM+ R
Sbjct: 120 G---PEKPRTIEETVKHEAQAMAPPKFRSSVITVGPSHCGSNQSTNIHQATTLPVSMSDR 176
Query: 928 SKNVEERLDTSSGGSSGCS-----KETESGRSVTISRKRKHAMDTDQESMSQSDVRLMST 764
SKNVEERLDTSSGGSSGCS KET SG SVTI RKRKH MD DQES+SQSD+ L ST
Sbjct: 177 SKNVEERLDTSSGGSSGCSYGRNNKETVSGTSVTIDRKRKHVMDADQESVSQSDIGLTST 236
Query: 763 DDQAMGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILD 584
DDQ MGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCS+TDKASILD
Sbjct: 237 DDQTMGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILD 296
Query: 583 EAIDYLKTLQMQLQVMWMGSGMAAAAAAAATPMMFPGVQSSQYINQMAMQSQMQMPQFPV 404
EAIDYLK+LQMQLQVMWMGSGMAAAAAAAA+PMMFPGVQSS YINQMAMQSQMQ+ QFPV
Sbjct: 297 EAIDYLKSLQMQLQVMWMGSGMAAAAAAAASPMMFPGVQSSPYINQMAMQSQMQLSQFPV 356
Query: 403 MNRPAAQNHPGLVCQNPAVQFQMQAQNQMLSEQLARYMGGFPPM-PATTQTQTV-QQPMD 230
MNR A QNHPGLVCQNP VQ Q+QAQNQ+LSEQLARYMGG P M PA Q QTV QQP D
Sbjct: 357 MNRSAPQNHPGLVCQNP-VQLQLQAQNQILSEQLARYMGGIPQMPPAGNQMQTVQQQPAD 415
Query: 229 MMRFGSQVGQQSQLSTPVTTDSLRMGKTG* 140
M+ FGS G QSQLS P TTDSL MGK G*
Sbjct: 416 MLGFGSPAGPQSQLSAPATTDSLHMGKIG* 445
>TAIR9_protein||AT3G59060.1 | Symbols: PIL6, PIF5 | PIL6 (PHYTOCHROME
INTERACTING FACTOR 3-LIKE 6); DNA binding / transcription factor |
chr3:21828189-21829895 REVERSE
Length = 443
Score = 705 bits (1817), Expect = 4e-203
Identities = 359/448 (80%), Positives = 384/448 (85%), Gaps = 10/448 (2%)
Frame = -2
Query: 1468 MEQLFSDWNFEDNFHMSSNKRSVRPEDELVELLWRDGQVVLQSQVRREPSVQVQTHKNDQ 1289
MEQ+F+DWNFEDNFHMS+NKRS+RPEDELVELLWRDGQVVLQSQ RREPSVQVQTHK +
Sbjct: 1 MEQVFADWNFEDNFHMSTNKRSIRPEDELVELLWRDGQVVLQSQARREPSVQVQTHK-QE 59
Query: 1288 TLRKPNNALLDNQETIRRPNDNVQGDQETVSWIQYPPEDVVDPFESEFSSHFFSSIDHLD 1109
TLRKPNN LDNQET+++PN DQETVSWIQYPP+DV+DPFESEFSSHFFSSIDHL
Sbjct: 60 TLRKPNNIFLDNQETVQKPNYAALDDQETVSWIQYPPDDVIDPFESEFSSHFFSSIDHLG 119
Query: 1108 GPNHPKKPLTIKETAKPEAKAMAPPKFRPPVVSVGPSHCGSNHSTNDHQVTHPPVSMNAR 929
G P+KP TI+ET K EA+AMAPPKFR V++VGPSHCGSN STN HQ T PVSM+ R
Sbjct: 120 G---PEKPRTIEETVKHEAQAMAPPKFRSSVITVGPSHCGSNQSTNIHQATTLPVSMSDR 176
Query: 928 SKNVEERLDTSSGGSSGCS-----KETESGRSVTISRKRKHAMDTDQESMSQSDVRLMST 764
SKNVEERLDTSSGGSSGCS KET SG SVTI RKRKH MD DQES+SQSD+ L ST
Sbjct: 177 SKNVEERLDTSSGGSSGCSYGRNNKETVSGTSVTIDRKRKHVMDADQESVSQSDIGLTST 236
Query: 763 DDQAMGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILD 584
DDQ MGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCS+TDKASILD
Sbjct: 237 DDQTMGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILD 296
Query: 583 EAIDYLKTLQMQLQVMWMGSGMAAAAAAAATPMMFPGVQSSQYINQMAMQSQMQMPQFPV 404
EAIDYLK+LQMQLQVMWMGSGMAAAAAAAA+PMMFPGVQSS YINQMAMQSQMQ+ QFPV
Sbjct: 297 EAIDYLKSLQMQLQVMWMGSGMAAAAAAAASPMMFPGVQSSPYINQMAMQSQMQLSQFPV 356
Query: 403 MNRPAAQNHPGLVCQNPAVQFQMQAQNQMLSEQLARYMGGFPPMPATTQTQTVQQPMDMM 224
MNR A QNHPGLVCQNP VQ Q+QAQNQ+LSEQLARYMGG P MP QQP DM+
Sbjct: 357 MNRSAPQNHPGLVCQNP-VQLQLQAQNQILSEQLARYMGGIPQMPPAGNQTVQQQPADML 415
Query: 223 RFGSQVGQQSQLSTPVTTDSLRMGKTG* 140
FGS G QSQLS P TTDSL MGK G*
Sbjct: 416 GFGSPAGPQSQLSAPATTDSLHMGKIG* 443
>TAIR9_protein||AT2G43010.1 | Symbols: PIF4, SRL2 | PIF4 (phytochrome
interacting factor 4); DNA binding / protein binding / transcription
factor | chr2:17887003-17888823 FORWARD
Length = 431
Score = 259 bits (660), Expect = 5e-069
Identities = 145/227 (63%), Positives = 176/227 (77%), Gaps = 19/227 (8%)
Frame = -2
Query: 1018 VVSVGPSHCGSNHSTNDHQVTHPPVSMNARSKNVEERLD----TSSGGSSGCSKETESGR 851
V +VGPSHCGSN S ND V+ + RSKN+EE+L+ +SSGGSSGCS G+
Sbjct: 158 VTTVGPSHCGSNPSQNDLDVS----MSHDRSKNIEEKLNPNASSSSGGSSGCS----FGK 209
Query: 850 SV-TISRKRKHAMDTDQESMSQSDVRLMSTDDQAMGNKSSQRSGSTRRSRAAEVHNLSER 674
+ ++ R D ++ ++ +D + +D A+GNKS+QRSGS RRSRAAEVHNLSER
Sbjct: 210 DIKEMASGRCITTDRKRKRINHTDESVSLSD--AIGNKSNQRSGSNRRSRAAEVHNLSER 267
Query: 673 RRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKTLQMQLQVMWMGSGMAAAAAAAA 494
RRRDRINERMKALQELIPHCSKTDKASILDEAIDYLK+LQ+QLQVMWMGSGMAAAAA+A
Sbjct: 268 RRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVMWMGSGMAAAAASA- 326
Query: 493 TPMMFPGVQSSQYINQMAMQSQMQMPQFPVMNRPAAQNHPGLVCQNP 353
PMMFPGVQ Q+I Q +QS +Q+P+FPVM++ A QN+PGLVCQNP
Sbjct: 327 -PMMFPGVQPQQFIRQ--IQSPVQLPRFPVMDQSAIQNNPGLVCQNP 370
>TAIR9_protein||AT2G43010.2 | Symbols: PIF4, SRL2 | PIF4 (phytochrome
interacting factor 4); DNA binding / protein binding / transcription
factor | chr2:17887003-17888823 FORWARD
Length = 429
Score = 259 bits (660), Expect = 5e-069
Identities = 145/227 (63%), Positives = 176/227 (77%), Gaps = 19/227 (8%)
Frame = -2
Query: 1018 VVSVGPSHCGSNHSTNDHQVTHPPVSMNARSKNVEERLD----TSSGGSSGCSKETESGR 851
V +VGPSHCGSN S ND V+ + RSKN+EE+L+ +SSGGSSGCS G+
Sbjct: 158 VTTVGPSHCGSNPSQNDLDVS----MSHDRSKNIEEKLNPNASSSSGGSSGCS----FGK 209
Query: 850 SV-TISRKRKHAMDTDQESMSQSDVRLMSTDDQAMGNKSSQRSGSTRRSRAAEVHNLSER 674
+ ++ R D ++ ++ +D + +D A+GNKS+QRSGS RRSRAAEVHNLSER
Sbjct: 210 DIKEMASGRCITTDRKRKRINHTDESVSLSD--AIGNKSNQRSGSNRRSRAAEVHNLSER 267
Query: 673 RRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKTLQMQLQVMWMGSGMAAAAAAAA 494
RRRDRINERMKALQELIPHCSKTDKASILDEAIDYLK+LQ+QLQVMWMGSGMAAAAA+A
Sbjct: 268 RRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVMWMGSGMAAAAASA- 326
Query: 493 TPMMFPGVQSSQYINQMAMQSQMQMPQFPVMNRPAAQNHPGLVCQNP 353
PMMFPGVQ Q+I Q +QS +Q+P+FPVM++ A QN+PGLVCQNP
Sbjct: 327 -PMMFPGVQPQQFIRQ--IQSPVQLPRFPVMDQSAIQNNPGLVCQNP 370
>TAIR9_protein||AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | PIF3 (PHYTOCHROME
INTERACTING FACTOR 3); DNA binding / protein binding / transcription
factor/ transcription regulator | chr1:3077216-3079367 FORWARD
Length = 525
Score = 121 bits (303), Expect = 1e-027
Identities = 81/174 (46%), Positives = 103/174 (59%), Gaps = 8/174 (4%)
Frame = -2
Query: 937 NARSKNVEERLDTSSGGSSGCSKETESGRSVTISRKRKHAMDTDQESMSQSDVRLMSTDD 758
+ R E+ S SG S + S S ++S KRKH+ D + S+ DV S D
Sbjct: 269 SCRKDQESEKAVVCSSVGSGNSLDGPS-ESPSLSLKRKHSNIQDIDCHSE-DVEEESGDG 326
Query: 757 QAMGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEA 578
+ S GS +RSR+AEVHNLSERRRRDRINE+M+ALQELIP+C+K DKAS+LDEA
Sbjct: 327 RKEAGPSRTGLGS-KRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEA 385
Query: 577 IDYLKTLQMQLQVMWMGSGMAAAAAAAATPMMFPGVQSSQYINQMAMQSQMQMP 416
I+YLK+LQ+Q+Q+M M SG A +MFP AM M MP
Sbjct: 386 IEYLKSLQLQVQIMSMASGYYLPPA-----VMFPPGMGHYPAAAAAMAMGMGMP 434
>TAIR9_protein||AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | PIF3 (PHYTOCHROME
INTERACTING FACTOR 3); DNA binding / protein binding / transcription
factor/ transcription regulator | chr1:3077216-3079367 FORWARD
Length = 525
Score = 121 bits (303), Expect = 1e-027
Identities = 81/174 (46%), Positives = 103/174 (59%), Gaps = 8/174 (4%)
Frame = -2
Query: 937 NARSKNVEERLDTSSGGSSGCSKETESGRSVTISRKRKHAMDTDQESMSQSDVRLMSTDD 758
+ R E+ S SG S + S S ++S KRKH+ D + S+ DV S D
Sbjct: 269 SCRKDQESEKAVVCSSVGSGNSLDGPS-ESPSLSLKRKHSNIQDIDCHSE-DVEEESGDG 326
Query: 757 QAMGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEA 578
+ S GS +RSR+AEVHNLSERRRRDRINE+M+ALQELIP+C+K DKAS+LDEA
Sbjct: 327 RKEAGPSRTGLGS-KRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEA 385
Query: 577 IDYLKTLQMQLQVMWMGSGMAAAAAAAATPMMFPGVQSSQYINQMAMQSQMQMP 416
I+YLK+LQ+Q+Q+M M SG A +MFP AM M MP
Sbjct: 386 IEYLKSLQLQVQIMSMASGYYLPPA-----VMFPPGMGHYPAAAAAMAMGMGMP 434
>TAIR9_protein||AT2G20180.2 | Symbols: PIL5 | PIL5 (PHYTOCHROME INTERACTING
FACTOR 3-LIKE 5); DNA binding / phytochrome binding / transcription
factor | chr2:8704525-8706538 REVERSE
Length = 479
Score = 116 bits (288), Expect = 7e-026
Identities = 59/115 (51%), Positives = 84/115 (73%), Gaps = 4/115 (3%)
Frame = -2
Query: 850 SVTISRKRKHAMDTDQESMSQSDVRLMSTDDQAMGNKSSQR----SGSTRRSRAAEVHNL 683
S +S+ T+ + + + +TD+ ++ +++ + ST+RSRAAEVHNL
Sbjct: 232 SSVVSKSEIEPEKTNVDDRKRKEREATTTDETESRSEETKQARVSTTSTKRSRAAEVHNL 291
Query: 682 SERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKTLQMQLQVMWMGSGM 518
SER+RRDRINERMKALQELIP C+K+DKAS+LDEAI+Y+K+LQ+Q+Q+M MG GM
Sbjct: 292 SERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSMGCGM 346
>TAIR9_protein||AT2G20180.1 | Symbols: PIL5, PIF1 | PIL5 (PHYTOCHROME
INTERACTING FACTOR 3-LIKE 5); DNA binding / phytochrome binding /
transcription factor | chr2:8704525-8706237 REVERSE
Length = 408
Score = 116 bits (288), Expect = 7e-026
Identities = 59/115 (51%), Positives = 84/115 (73%), Gaps = 4/115 (3%)
Frame = -2
Query: 850 SVTISRKRKHAMDTDQESMSQSDVRLMSTDDQAMGNKSSQR----SGSTRRSRAAEVHNL 683
S +S+ T+ + + + +TD+ ++ +++ + ST+RSRAAEVHNL
Sbjct: 161 SSVVSKSEIEPEKTNVDDRKRKEREATTTDETESRSEETKQARVSTTSTKRSRAAEVHNL 220
Query: 682 SERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKTLQMQLQVMWMGSGM 518
SER+RRDRINERMKALQELIP C+K+DKAS+LDEAI+Y+K+LQ+Q+Q+M MG GM
Sbjct: 221 SERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSMGCGM 275
>TAIR9_protein||AT4G28811.1 | Symbols: | transcription regulator |
chr4:14225335-14227840 FORWARD
Length = 545
Score = 114 bits (283), Expect = 3e-025
Identities = 78/215 (36%), Positives = 110/215 (51%), Gaps = 17/215 (7%)
Frame = -2
Query: 958 THPPVSMNARSKNVEERLDTSSGGSSGCSKETE----SGRSVTISRKRKHAMDTDQESMS 791
TH S A V G G TE S V + + + ++E+
Sbjct: 269 THGTESRAAAITGVSRTFAVPGLGRRGKEVATETAGTSYSGVNKAETERVQIQPERETKI 328
Query: 790 QSDVRLMSTDDQAMGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCS 611
D + T + G + + S S +RSRAA++HNLSERRRR+RINERMK LQEL+P C
Sbjct: 329 TEDKKREETIAEIQGTEEAHGSTSRKRSRAADMHNLSERRRRERINERMKTLQELLPRCR 388
Query: 610 KTDKASILDEAIDYLKTLQMQLQVMWMGSGMAAAAAAAATPMMFPGVQSSQYINQMAM-Q 434
KTDK S+L++ I+Y+K+LQ+Q+Q+M MG GM PMM G + Q++ MAM
Sbjct: 389 KTDKVSMLEDVIEYVKSLQLQIQMMSMGHGM-------MPPMMHEG-NTQQFMPHMAMGM 440
Query: 433 SQMQMP----QFPVMNRPAAQNHPGLVCQNPAVQF 341
M P FP P + G+ PA+++
Sbjct: 441 KGMNRPPPFVPFPGKTFPRPGHMAGVGPSYPALRY 475
>TAIR9_protein||AT4G36930.1 | Symbols: SPT | SPT (SPATULA); DNA binding /
transcription factor | chr4:17414167-17415945 FORWARD
Length = 374
Score = 107 bits (266), Expect = 2e-023
Identities = 63/128 (49%), Positives = 87/128 (67%), Gaps = 2/128 (1%)
Frame = -2
Query: 898 SSGGSSGCSKETESGRSVTISRKRKHAMDTDQESMSQSDVRLMSTDDQAMGNKSSQRS-G 722
S GG++ + SG V+ S +TD E +S+ + D+A +KS S
Sbjct: 133 SGGGNNNNVQGNSSGTRVSSSSVGASGNETD-EYDCESEEGGEAVVDEAPSSKSGPSSRS 191
Query: 721 STRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKTLQMQLQ 542
S++R RAAEVHNLSE+RRR RINE+MKALQ LIP+ +KTDKAS+LDEAI+YLK LQ+Q+Q
Sbjct: 192 SSKRCRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 251
Query: 541 VMWMGSGM 518
++ M +G+
Sbjct: 252 MLTMRNGI 259
>TAIR9_protein||AT4G28790.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:14218329-14220173 FORWARD
Length = 414
Score = 106 bits (263), Expect = 6e-023
Identities = 66/158 (41%), Positives = 95/158 (60%), Gaps = 16/158 (10%)
Frame = -2
Query: 907 LDTSSGGSSG-CSKETESGRSVTISRKRKHAMDTDQESMSQSDVRLMSTDDQAMGNKSSQ 731
++T+ S G C ETE +R+ A +TD + R T+ + G + ++
Sbjct: 217 IETAGTQSWGLCKAETE-------PVQRQPATETDITDERKRKTR-EETNVENQGTEEAR 268
Query: 730 RSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKTLQM 551
S S++RSRAA +H LSERRRR +INE MKALQEL+P C+KTD++S+LD+ I+Y+K+LQ
Sbjct: 269 DSTSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQS 328
Query: 550 QLQVMWMGSGMAAAAAAAATPMMFPGVQSSQYINQMAM 437
Q+Q+ MG M PMM+ G QY+ MAM
Sbjct: 329 QIQMFSMGHVM-------IPPMMYAGNIQQQYMPHMAM 359
>TAIR9_protein||AT2G46970.1 | Symbols: PIL1 | PIL1 (PHYTOCHROME INTERACTING
FACTOR 3-LIKE 1); transcription factor | chr2:19295617-19297678
REVERSE
Length = 417
Score = 104 bits (257), Expect = 3e-022
Identities = 74/206 (35%), Positives = 108/206 (52%), Gaps = 16/206 (7%)
Frame = -2
Query: 973 NDHQVTHPPVSMNAR-SKNVEERLDTSSGGSSGCSKETESGRSVTISRKRKHAMDTDQES 797
N T PP +A ++ E +SS S G S++ S KRK+ ++ES
Sbjct: 144 NVEVTTAPPDEQSAAVGRSTELYFASSSKFSRGTSRDLS-----CCSLKRKYGDIEEEES 198
Query: 796 MSQSDVRLMSTDDQAMGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPH 617
S+ +DD + R T+R R+ EVH L ER+RRD N++M+ALQ+L+P+
Sbjct: 199 TYLSNNSDDESDDAKTQVHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPN 258
Query: 616 CSKTDKASILDEAIDYLKTLQMQLQVMWMGSGMAAAAAAAATPMMFPGVQSSQY---INQ 446
C K DKAS+LDEAI Y++TLQ+Q+Q+M MG+G+ P M P S ++
Sbjct: 259 CYKDDKASLLDEAIKYMRTLQLQVQMMSMGNGL------IRPPTMLPMGHYSPMGLGMHM 312
Query: 445 MAMQSQMQMPQFPVMNRPAAQNHPGL 368
A + +PQF MN A PG+
Sbjct: 313 GAAATPTSIPQFLPMN-VQATGFPGM 337
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,440,354,295
Number of Sequences: 33410
Number of Extensions: 1440354295
Number of Successful Extensions: 53408341
Number of sequences better than 0.0: 0
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