BLASTX 7.6.2
Query= UN01367 /QuerySize=1383
(1382 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G01220.1 | Symbols: | FUNCTIONS IN: molecular... 657 7e-189
TAIR9_protein||AT4G01770.1 | Symbols: RGXT1 | RGXT1 (rhamnogalac... 568 3e-162
TAIR9_protein||AT4G01750.1 | Symbols: RGXT2 | RGXT2 (rhamnogalac... 566 2e-161
TAIR9_protein||AT1G56550.1 | Symbols: | UDP-xylosyltransferase ... 532 2e-151
TAIR9_protein||AT4G01220.2 | Symbols: | FUNCTIONS IN: molecular... 529 2e-150
>TAIR9_protein||AT4G01220.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
endoplasmic reticulum; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon
(InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: RGXT1
(rhamnogalacturonan xylosyltransferase 1); UDP-xylosyltransferase
(TAIR:AT4G01770.1); Has 188 Blast hits to 185 proteins in 17 species:
Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 165; Viruses
- 0; Other Eukaryotes - 21 (source: NCBI BLink). | chr4:513431-515648
REVERSE
Length = 361
Score = 657 bits (1693), Expect = 7e-189
Identities = 316/362 (87%), Positives = 332/362 (91%), Gaps = 5/362 (1%)
Frame = +1
Query: 103 MAQQQFLHQRPIK----NPFSSSPLSNSSLSNRPISLLSRNGLLLLLALLVILGVFLPWA 270
MAQQ+FLHQRPI+ NPFSSSPLS SS+SNRPISLLSRNGLLLLLALLVILGVFLPWA
Sbjct: 1 MAQQKFLHQRPIQNPFTNPFSSSPLSTSSISNRPISLLSRNGLLLLLALLVILGVFLPWA 60
Query: 271 GSPLLPFPNTFSSSSHSKWRDYSLAQAVRFVAKNGTVIVCAVSYPYLPFLNNWLISVSRQ 450
GSPL P PN S S SKWRDYSL QAV+FVAKNGTVIVCAVSYPYLPFLNNWLISVSRQ
Sbjct: 61 GSPLFPSPNKL-SPSQSKWRDYSLPQAVKFVAKNGTVIVCAVSYPYLPFLNNWLISVSRQ 119
Query: 451 NHQDKVLVIAEDYATLYKVNEKWPGHAVLIPPALDSQTAHKFGSQGFFNFTSRRPQHLLQ 630
HQD+VLVIAEDYATLYKVNEKWPGHAVLIPPALDSQTAHKFGSQGFFNFT+RRPQHLL+
Sbjct: 120 KHQDQVLVIAEDYATLYKVNEKWPGHAVLIPPALDSQTAHKFGSQGFFNFTARRPQHLLE 179
Query: 631 IVELGYSVMYNDVDMVWLQDPFNYLEGRHDVYFEDDMTAIKPLDHSHDLPPPGKKGRPYI 810
I+ELGY+VMYNDVDMVWLQDPF YLEG+HD YF DDMTAIKPLDHSHDLPPPGKKGR YI
Sbjct: 180 ILELGYNVMYNDVDMVWLQDPFQYLEGKHDAYFMDDMTAIKPLDHSHDLPPPGKKGRTYI 239
Query: 811 CSCMIFLRPTTGAKLLLKKWIEEMRDQPWSREKKANDQPAFNWALMKTAHQVDLYLLPQA 990
CSCMIFLRPT GAKLL+KKWIEE+ QPWSR KKANDQP FNWAL KTA+QVD+YLL QA
Sbjct: 240 CSCMIFLRPTNGAKLLMKKWIEELETQPWSRAKKANDQPGFNWALNKTANQVDMYLLSQA 299
Query: 991 AFPTGGLYFKNKTWVKETKGKHVIIHNNYILGFEKKTKRFRDYGLWLVDDHALESPLGKL 1170
AFPTGGLYFKNKTWVKETKGKH IIHNNYI+GFEKK KRFRD+ LWLVDDHA ESPLGKL
Sbjct: 300 AFPTGGLYFKNKTWVKETKGKHAIIHNNYIVGFEKKIKRFRDFNLWLVDDHASESPLGKL 359
Query: 1171 E* 1176
E*
Sbjct: 360 E* 361
>TAIR9_protein||AT4G01770.1 | Symbols: RGXT1 | RGXT1 (rhamnogalacturonan
xylosyltransferase 1); UDP-xylosyltransferase | chr4:764564-766596
FORWARD
Length = 362
Score = 568 bits (1463), Expect = 3e-162
Identities = 277/353 (78%), Positives = 304/353 (86%), Gaps = 7/353 (1%)
Frame = +1
Query: 139 KNPFSSSPLSNSSLSNRPISLLSRNG-LLLLLALLVILGVFLPWAGSPLLPFPNTFSS-- 309
++ FSSSP S SS+S+RPISLLSRNG LLLLLAL+++LGV LPW GSPL FPN SS
Sbjct: 10 QSTFSSSPSSYSSISDRPISLLSRNGLLLLLLALVLLLGVLLPWPGSPLFLFPNRLSSSL 69
Query: 310 --SSHSKWRDYSLAQAVRFVAKNGTVIVCAVSYPYLPFLNNWLISVSRQNHQDKVLVIAE 483
S SKWRDY+LAQA RFVAKNGTVIVCAVS P+LPFLNNWLISVSRQ HQDKVLVIAE
Sbjct: 70 SPSPQSKWRDYTLAQAARFVAKNGTVIVCAVSSPFLPFLNNWLISVSRQKHQDKVLVIAE 129
Query: 484 DYATLYKVNEKWPGHAVLIPPALDSQTAHKFGSQGFFNFTSRRPQHLLQIVELGYSVMYN 663
DY TLYKVNEKWPGHAVLIPPALDS+TA FGSQGFFNFT+RRPQHLLQI+ELGY+VMYN
Sbjct: 130 DYITLYKVNEKWPGHAVLIPPALDSKTAFSFGSQGFFNFTARRPQHLLQILELGYNVMYN 189
Query: 664 DVDMVWLQDPFNYLEGRHDVYFEDDMTAIKPLDHSHDLPPPGKKGRPYICSCMIFLRPTT 843
DVDMVWLQDPF YLEG HD YF DDM IKPL+HSHDLP P + G YICSCMI+LRPT
Sbjct: 190 DVDMVWLQDPFLYLEGSHDAYFTDDMPQIKPLNHSHDLPHPDRNGETYICSCMIYLRPTN 249
Query: 844 GAKLLLKKWIEEMRDQPWSR--EKKANDQPAFNWALMKTAHQVDLYLLPQAAFPTGGLYF 1017
GAKLL+KKW EE++ Q WS KANDQPAFN AL KTAHQVDLYLL Q AFPTGGLYF
Sbjct: 250 GAKLLMKKWSEELQSQAWSESIRFKANDQPAFNLALNKTAHQVDLYLLSQVAFPTGGLYF 309
Query: 1018 KNKTWVKETKGKHVIIHNNYILGFEKKTKRFRDYGLWLVDDHALESPLGKLE* 1176
KN+ WV+ETKGKHVI+HNNYI+G+++K KRF+DYGLWLVDDHALESPLGKLE*
Sbjct: 310 KNEAWVQETKGKHVIVHNNYIIGYDRKMKRFQDYGLWLVDDHALESPLGKLE* 362
>TAIR9_protein||AT4G01750.1 | Symbols: RGXT2 | RGXT2 (rhamnogalacturonan
xylosyltransferase 2); UDP-xylosyltransferase | chr4:756534-758364
FORWARD
Length = 368
Score = 566 bits (1457), Expect = 2e-161
Identities = 280/371 (75%), Positives = 311/371 (83%), Gaps = 16/371 (4%)
Frame = +1
Query: 103 MAQ-QQFLHQRPIKNPFSSSPLSNSSLSNRPISLLSRNGLLL-LLALLVILGVFLPWAGS 276
MAQ QQ LHQ + PFSSSP S SS+SNRPI LLSRNGLLL LLAL ++LGVFLPW GS
Sbjct: 1 MAQKQQTLHQ---QRPFSSSPRSYSSISNRPIFLLSRNGLLLVLLALFLLLGVFLPWPGS 57
Query: 277 PLLPFPNTFSSSSH---------SKWRDYSLAQAVRFVAKNGTVIVCAVSYPYLPFLNNW 429
PLL FPN SS S+ S+WR+Y+LAQA +FVA NGTVIVCAVS P+LPFLNNW
Sbjct: 58 PLLLFPNKVSSPSYASSLSPHAKSEWRNYTLAQAAKFVATNGTVIVCAVSSPFLPFLNNW 117
Query: 430 LISVSRQNHQDKVLVIAEDYATLYKVNEKWPGHAVLIPPALDSQTAHKFGSQGFFNFTSR 609
LISVSRQ HQ+KVLVIAEDY TLYKVNEKWPGHAVLIPPALDS+TA+ FGSQGFFNFT+R
Sbjct: 118 LISVSRQKHQEKVLVIAEDYITLYKVNEKWPGHAVLIPPALDSKTAYSFGSQGFFNFTAR 177
Query: 610 RPQHLLQIVELGYSVMYNDVDMVWLQDPFNYLEGRHDVYFEDDMTAIKPLDHSHDLPPPG 789
RPQHLLQI+ELGY+VMYNDVDMVWLQDPF YLEG HD YF DDM IKPL+HSHDLP P
Sbjct: 178 RPQHLLQILELGYNVMYNDVDMVWLQDPFQYLEGSHDAYFTDDMPQIKPLNHSHDLPAPD 237
Query: 790 KKGRPYICSCMIFLRPTTGAKLLLKKWIEEMRDQPWSR--EKKANDQPAFNWALMKTAHQ 963
+ G YICSCMI+LRPT GAKLL+KKW EE++ Q WS KANDQPAFN AL KTAHQ
Sbjct: 238 QNGETYICSCMIYLRPTNGAKLLMKKWSEELQSQAWSESIRFKANDQPAFNLALNKTAHQ 297
Query: 964 VDLYLLPQAAFPTGGLYFKNKTWVKETKGKHVIIHNNYILGFEKKTKRFRDYGLWLVDDH 1143
VDLYLL Q AFPTGGLYF + WVKETKGKHVI+HNNYI+G+++K +RF+DYGLWLVDDH
Sbjct: 298 VDLYLLSQVAFPTGGLYFNDAAWVKETKGKHVIVHNNYIIGYDRKMRRFQDYGLWLVDDH 357
Query: 1144 ALESPLGKLE* 1176
ALESPLGKL+*
Sbjct: 358 ALESPLGKLQ* 368
>TAIR9_protein||AT1G56550.1 | Symbols: | UDP-xylosyltransferase |
chr1:21185836-21188070 REVERSE
Length = 384
Score = 532 bits (1370), Expect = 2e-151
Identities = 260/347 (74%), Positives = 295/347 (85%), Gaps = 11/347 (3%)
Frame = +1
Query: 166 SNSSLSNRPISLLSRNG--LLLLLALLVILGVFLPWAGSPLLPFPNTFSSS-------SH 318
S +SNR ISLL+RNG LLLLLAL VILGVFLP S L FPNT SSS S
Sbjct: 5 SQRPISNRHISLLNRNGLILLLLLALFVILGVFLPLTKSSLFMFPNTTSSSLSPSSSLSV 64
Query: 319 SKWRDYSLAQAVRFVAKNGTVIVCAVSYPYLPFLNNWLISVSRQNHQDKVLVIAEDYATL 498
S WRDYSLAQAV+FVAKN TVIVCAVSYP+LPFLNNWLIS+SRQ HQ+KVLVIAEDYATL
Sbjct: 65 SDWRDYSLAQAVKFVAKNETVIVCAVSYPFLPFLNNWLISISRQKHQEKVLVIAEDYATL 124
Query: 499 YKVNEKWPGHAVLIPPALDSQTAHKFGSQGFFNFTSRRPQHLLQIVELGYSVMYNDVDMV 678
YKVNEKWPGHAVLIPPALD Q+AHKFGSQGFFN TSRRPQHLL I+ELGY+VMYNDVDMV
Sbjct: 125 YKVNEKWPGHAVLIPPALDPQSAHKFGSQGFFNLTSRRPQHLLNILELGYNVMYNDVDMV 184
Query: 679 WLQDPFNYLEGRHDVYFEDDMTAIKPLDHSHDLPPPGKKGRPYICSCMIFLRPTTGAKLL 858
WLQDPF+YL+G +D YF DDM AIKPL+HSHDLPP + G Y+CSCMIFLR T G KLL
Sbjct: 185 WLQDPFDYLQGSYDAYFMDDMIAIKPLNHSHDLPPLSRSGVTYVCSCMIFLRSTDGGKLL 244
Query: 859 LKKWIEEMRDQPW--SREKKANDQPAFNWALMKTAHQVDLYLLPQAAFPTGGLYFKNKTW 1032
+K W+EE++ QPW ++ KK +DQPAFN AL KTA+QV +YLLPQ+AFP+GGLYF+N+TW
Sbjct: 245 MKTWVEEIQAQPWNNTQAKKPHDQPAFNRALHKTANQVKVYLLPQSAFPSGGLYFRNETW 304
Query: 1033 VKETKGKHVIIHNNYILGFEKKTKRFRDYGLWLVDDHALESPLGKLE 1173
V ET+GKHVI+HNNYI+G++KK KRF+D+ LWLVDDHALESPLGKLE
Sbjct: 305 VNETRGKHVIVHNNYIIGYDKKMKRFQDFSLWLVDDHALESPLGKLE 351
>TAIR9_protein||AT4G01220.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
endoplasmic reticulum; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon
(InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: RGXT1
(rhamnogalacturonan xylosyltransferase 1); UDP-xylosyltransferase
(TAIR:AT4G01770.1); Has 153 Blast hits to 150 proteins in 16 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 142; Viruses
- 0; Other Eukaryotes - 11 (source: NCBI BLink). | chr4:514146-515648
REVERSE
Length = 300
Score = 529 bits (1362), Expect = 2e-150
Identities = 258/300 (86%), Positives = 273/300 (91%), Gaps = 6/300 (2%)
Frame = +1
Query: 103 MAQQQFLHQRPIK----NPFSSSPLSNSSLSNRPISLLSRNGLLLLLALLVILGVFLPWA 270
MAQQ+FLHQRPI+ NPFSSSPLS SS+SNRPISLLSRNGLLLLLALLVILGVFLPWA
Sbjct: 1 MAQQKFLHQRPIQNPFTNPFSSSPLSTSSISNRPISLLSRNGLLLLLALLVILGVFLPWA 60
Query: 271 GSPLLPFPNTFSSSSHSKWRDYSLAQAVRFVAKNGTVIVCAVSYPYLPFLNNWLISVSRQ 450
GSPL P PN S S SKWRDYSL QAV+FVAKNGTVIVCAVSYPYLPFLNNWLISVSRQ
Sbjct: 61 GSPLFPSPNKL-SPSQSKWRDYSLPQAVKFVAKNGTVIVCAVSYPYLPFLNNWLISVSRQ 119
Query: 451 NHQDKVLVIAEDYATLYKVNEKWPGHAVLIPPALDSQTAHKFGSQGFFNFTSRRPQHLLQ 630
HQD+VLVIAEDYATLYKVNEKWPGHAVLIPPALDSQTAHKFGSQGFFNFT+RRPQHLL+
Sbjct: 120 KHQDQVLVIAEDYATLYKVNEKWPGHAVLIPPALDSQTAHKFGSQGFFNFTARRPQHLLE 179
Query: 631 IVELGYSVMYNDVDMVWLQDPFNYLEGRHDVYFEDDMTAIKPLDHSHDLPPPGKKGRPYI 810
I+ELGY+VMYNDVDMVWLQDPF YLEG+HD YF DDMTAIKPLDHSHDLPPPGKKGR YI
Sbjct: 180 ILELGYNVMYNDVDMVWLQDPFQYLEGKHDAYFMDDMTAIKPLDHSHDLPPPGKKGRTYI 239
Query: 811 CSCMIFLRPTTGAKLLLKKWIEEMRDQPWSREKKANDQPAFNWALMKTAHQV-DLYLLPQ 987
CSCMIFLRPT GAKLL+KKWIEE+ QPWSR KKANDQP FNWAL KTA+QV +L+PQ
Sbjct: 240 CSCMIFLRPTNGAKLLMKKWIEELETQPWSRAKKANDQPGFNWALNKTANQVCSFFLVPQ 299
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,440,354,295
Number of Sequences: 33410
Number of Extensions: 1440354295
Number of Successful Extensions: 53408341
Number of sequences better than 0.0: 0
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