BLASTX 7.6.2
Query= UN01370 /QuerySize=1082
(1081 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G16840.3 | Symbols: BPA1 | BPA1 (BINDINGPARTNE... 429 1e-120
TAIR9_protein||AT5G16840.1 | Symbols: BPA1 | BPA1 (BINDINGPARTNE... 426 1e-119
TAIR9_protein||AT5G16840.2 | Symbols: BPA1 | BPA1 (BINDINGPARTNE... 421 4e-118
TAIR9_protein||AT4G17720.1 | Symbols: | RNA recognition motif (... 270 1e-072
TAIR9_protein||AT5G46870.1 | Symbols: | RNA recognition motif (... 255 3e-068
TAIR9_protein||AT1G67950.3 | Symbols: | RNA recognition motif (... 196 3e-050
TAIR9_protein||AT1G67950.1 | Symbols: | RNA recognition motif (... 195 6e-050
TAIR9_protein||AT1G67950.2 | Symbols: | RNA recognition motif (... 195 6e-050
TAIR9_protein||AT1G67950.4 | Symbols: | RNA recognition motif (... 168 1e-041
TAIR9_protein||AT5G32450.1 | Symbols: | RNA recognition motif (... 139 4e-033
TAIR9_protein||AT3G01210.1 | Symbols: | nucleic acid binding / ... 129 5e-030
TAIR9_protein||AT1G14340.1 | Symbols: | RNA recognition motif (... 106 4e-023
TAIR9_protein||AT3G23900.1 | Symbols: | RNA recognition motif (... 49 6e-006
>TAIR9_protein||AT5G16840.3 | Symbols: BPA1 | BPA1 (BINDINGPARTNEROFACD11 1);
nucleic acid binding / nucleotide binding / oxidoreductase |
chr5:5536042-5538026 FORWARD
Length = 258
Score = 429 bits (1103), Expect = 1e-120
Identities = 224/258 (86%), Positives = 239/258 (92%), Gaps = 5/258 (1%)
Frame = +3
Query: 132 MAIRSVKVSNLSSGATEHGIKEFFSFSGEVESIDIQGNEHSAYVTFKDPQGAETAVLLSG 311
MA+RSVKV NLSSGATEH IKEFFSFSGEVESIDIQ NEHSAYVTFK+ QGAETAVLLSG
Sbjct: 1 MAVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSNEHSAYVTFKETQGAETAVLLSG 60
Query: 312 ASIADQSVIIEMAPNYTPPAAPHAETQSGGGGGGVAESVVQKAEDVVSSMLAKGFILGKD 491
ASIADQSVIIE+APNY+PPAAPHAETQS G AESVVQKAEDVVSSMLAKGFILGKD
Sbjct: 61 ASIADQSVIIELAPNYSPPAAPHAETQSSG-----AESVVQKAEDVVSSMLAKGFILGKD 115
Query: 492 AVGKAKAFDEKLGFTSTATAGVASIDQKIGLTQKITAGTSLVTEKIKGVDQSFQVTERTK 671
AVGKAKAFDEK GFTSTATAGVAS+DQKIGL+QK+TAGTSLV EKIK VDQ+FQVTERTK
Sbjct: 116 AVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVDQNFQVTERTK 175
Query: 672 SAFATAEQTVSSAGTAVMKNRFVLTGVSWAAGAFNRVAKAAGEVSQKTKEKVEAEQPPQP 851
S +A AEQTVSSAG+AVMKNR+VLTGVSWAAGAFNRVA+AAGEV QKTKEKVEAEQP QP
Sbjct: 176 SVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKEKVEAEQPSQP 235
Query: 852 SQTEHQPPEGYSPIHSSE 905
+Q++ Q PEGYSPIHSSE
Sbjct: 236 AQSQQQLPEGYSPIHSSE 253
>TAIR9_protein||AT5G16840.1 | Symbols: BPA1 | BPA1 (BINDINGPARTNEROFACD11 1);
nucleic acid binding / nucleotide binding / oxidoreductase |
chr5:5536042-5538026 FORWARD
Length = 260
Score = 426 bits (1094), Expect = 1e-119
Identities = 222/256 (86%), Positives = 237/256 (92%), Gaps = 5/256 (1%)
Frame = +3
Query: 138 IRSVKVSNLSSGATEHGIKEFFSFSGEVESIDIQGNEHSAYVTFKDPQGAETAVLLSGAS 317
+RSVKV NLSSGATEH IKEFFSFSGEVESIDIQ NEHSAYVTFK+ QGAETAVLLSGAS
Sbjct: 5 VRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSNEHSAYVTFKETQGAETAVLLSGAS 64
Query: 318 IADQSVIIEMAPNYTPPAAPHAETQSGGGGGGVAESVVQKAEDVVSSMLAKGFILGKDAV 497
IADQSVIIE+APNY+PPAAPHAETQS G AESVVQKAEDVVSSMLAKGFILGKDAV
Sbjct: 65 IADQSVIIELAPNYSPPAAPHAETQSSG-----AESVVQKAEDVVSSMLAKGFILGKDAV 119
Query: 498 GKAKAFDEKLGFTSTATAGVASIDQKIGLTQKITAGTSLVTEKIKGVDQSFQVTERTKSA 677
GKAKAFDEK GFTSTATAGVAS+DQKIGL+QK+TAGTSLV EKIK VDQ+FQVTERTKS
Sbjct: 120 GKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVDQNFQVTERTKSV 179
Query: 678 FATAEQTVSSAGTAVMKNRFVLTGVSWAAGAFNRVAKAAGEVSQKTKEKVEAEQPPQPSQ 857
+A AEQTVSSAG+AVMKNR+VLTGVSWAAGAFNRVA+AAGEV QKTKEKVEAEQP QP+Q
Sbjct: 180 YAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKEKVEAEQPSQPAQ 239
Query: 858 TEHQPPEGYSPIHSSE 905
++ Q PEGYSPIHSSE
Sbjct: 240 SQQQLPEGYSPIHSSE 255
>TAIR9_protein||AT5G16840.2 | Symbols: BPA1 | BPA1 (BINDINGPARTNEROFACD11 1);
nucleic acid binding / nucleotide binding / oxidoreductase |
chr5:5536042-5538026 FORWARD
Length = 261
Score = 421 bits (1082), Expect = 4e-118
Identities = 222/257 (86%), Positives = 237/257 (92%), Gaps = 6/257 (2%)
Frame = +3
Query: 138 IRSVKVSNLSSGATEHGIKEFFSFSGEVESIDIQ-GNEHSAYVTFKDPQGAETAVLLSGA 314
+RSVKV NLSSGATEH IKEFFSFSGEVESIDIQ NEHSAYVTFK+ QGAETAVLLSGA
Sbjct: 5 VRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSSNEHSAYVTFKETQGAETAVLLSGA 64
Query: 315 SIADQSVIIEMAPNYTPPAAPHAETQSGGGGGGVAESVVQKAEDVVSSMLAKGFILGKDA 494
SIADQSVIIE+APNY+PPAAPHAETQS G AESVVQKAEDVVSSMLAKGFILGKDA
Sbjct: 65 SIADQSVIIELAPNYSPPAAPHAETQSSG-----AESVVQKAEDVVSSMLAKGFILGKDA 119
Query: 495 VGKAKAFDEKLGFTSTATAGVASIDQKIGLTQKITAGTSLVTEKIKGVDQSFQVTERTKS 674
VGKAKAFDEK GFTSTATAGVAS+DQKIGL+QK+TAGTSLV EKIK VDQ+FQVTERTKS
Sbjct: 120 VGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVDQNFQVTERTKS 179
Query: 675 AFATAEQTVSSAGTAVMKNRFVLTGVSWAAGAFNRVAKAAGEVSQKTKEKVEAEQPPQPS 854
+A AEQTVSSAG+AVMKNR+VLTGVSWAAGAFNRVA+AAGEV QKTKEKVEAEQP QP+
Sbjct: 180 VYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKEKVEAEQPSQPA 239
Query: 855 QTEHQPPEGYSPIHSSE 905
Q++ Q PEGYSPIHSSE
Sbjct: 240 QSQQQLPEGYSPIHSSE 256
>TAIR9_protein||AT4G17720.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:9862660-9864498 REVERSE
Length = 314
Score = 270 bits (690), Expect = 1e-072
Identities = 148/264 (56%), Positives = 189/264 (71%), Gaps = 9/264 (3%)
Frame = +3
Query: 132 MAIRSVKVSNLSSGATEHGIKEFFSFSGEVESIDIQGNEHS---AYVTFKDPQGAETAVL 302
M + +VKVSN+S GAT+ +KEFFSFSG++ ++ Q AYVTFKD QGAETAVL
Sbjct: 1 MTMTTVKVSNVSLGATDRDLKEFFSFSGDILYLETQSETERTKLAYVTFKDLQGAETAVL 60
Query: 303 LSGASIADQSVIIEMAPNY--TPPAAPHAETQSGGGGGGVAESVVQKAEDVVSSMLAKGF 476
LSGA+I D SVI+ MAP+Y +P A E + +SV++KAEDVVSSMLAKGF
Sbjct: 61 LSGATIVDSSVIVSMAPDYQLSPEALASLEPKDSNKSPKAGDSVLRKAEDVVSSMLAKGF 120
Query: 477 ILGKDAVGKAKAFDEKLGFTSTATAGVASIDQKIGLTQKITAGTSLVTEKIKGVDQSFQV 656
ILGKDA+ KAK+ DEK TSTA+A VAS D+KIG T KI GT +V EK++ VDQ +QV
Sbjct: 121 ILGKDAIAKAKSVDEKHQLTSTASAKVASFDKKIGFTDKINTGTVVVGEKVREVDQKYQV 180
Query: 657 TERTKSAFATAEQTVSSAGTAVMKNRFVLTGVSWAAGAFNRVAKAAGEVSQKTKEKVEAE 836
+E+TKSA A AEQTVS+AG+A+MKNR+VLTG +W GAFN+VAKAA EV QK KEKV
Sbjct: 181 SEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNKVAKAAEEVGQKAKEKVGMA 240
Query: 837 QPPQPSQTEHQPPEGYSPIHSSES 908
+ + + + + ++ +H SES
Sbjct: 241 E----EEDKRKVVDEFARVHLSES 260
>TAIR9_protein||AT5G46870.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:19015486-19016990 FORWARD
Length = 296
Score = 255 bits (651), Expect = 3e-068
Identities = 138/241 (57%), Positives = 177/241 (73%), Gaps = 9/241 (3%)
Frame = +3
Query: 132 MAIRSVKVSNLSSGATEHGIKEFFSFSGEVESIDIQGNEHS---AYVTFKDPQGAETAVL 302
M++ +VKVSN+S ATE +KEFFSFSG++ ++ Q AYVTFKD QGAETAVL
Sbjct: 1 MSMVTVKVSNVSLEATERDLKEFFSFSGDIAYLETQSENDGSKLAYVTFKDLQGAETAVL 60
Query: 303 LSGASIADQSVIIEMAPNYTPP----AAPHAETQSGGGGGGVAE--SVVQKAEDVVSSML 464
L+G++I D SV + M+P+Y P A+ + +S E SV +KAEDVVS M+
Sbjct: 61 LTGSTIVDSSVTVTMSPDYQLPPDALASIESLKESNKSSSPTREDVSVFRKAEDVVSGMI 120
Query: 465 AKGFILGKDAVGKAKAFDEKLGFTSTATAGVASIDQKIGLTQKITAGTSLVTEKIKGVDQ 644
+KGF+LGKDA+ KAK+ DEK TSTA+A V S D++IG T+KI GT++V+EK+K VDQ
Sbjct: 121 SKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDKRIGFTEKINTGTTVVSEKVKEVDQ 180
Query: 645 SFQVTERTKSAFATAEQTVSSAGTAVMKNRFVLTGVSWAAGAFNRVAKAAGEVSQKTKEK 824
FQVTE+TKSA A AEQTVS+AG+A+MKNR+VLTG +W GAFNRV+KAA EV QK KEK
Sbjct: 181 KFQVTEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNRVSKAAEEVGQKAKEK 240
Query: 825 V 827
V
Sbjct: 241 V 241
>TAIR9_protein||AT1G67950.3 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:25478884-25480420 REVERSE
Length = 280
Score = 196 bits (496), Expect = 3e-050
Identities = 111/241 (46%), Positives = 159/241 (65%), Gaps = 15/241 (6%)
Frame = +3
Query: 120 RSNSMAIRSVKVSNLSSGATEHGIKEFFSFSGEVESIDIQGNEHS---AYVTFKDPQGAE 290
+S +++VK+SN+S ++ +KEFFSFSG+++ ++++ AYVTFKD QGAE
Sbjct: 22 QSTVSGVKTVKISNVSLIVSKKDVKEFFSFSGDIQYVEMRSETQESQVAYVTFKDSQGAE 81
Query: 291 TAVLLSGASIADQSVIIEMAPNY-TPPAAPHAETQSGGGGGGVAESVVQKAEDVVSSMLA 467
TA+LL+GA IAD V I A NY PP A ++Q G V+KAEDVV+ M+
Sbjct: 82 TAMLLTGAVIADLRVSITPAVNYQLPPEALALDSQEHSFNG----FSVKKAEDVVNIMVG 137
Query: 468 KGFILGKDAVGKAKAFDEKLGFTSTATAGVASIDQKIGLTQKITAGTSLVTEKIKGVDQS 647
+G+ LGKDA+ KAKAFD++ S A+A +AS+D K+GL++K++ GT++V EK++ +D+
Sbjct: 138 RGYALGKDAMEKAKAFDDRHNLISNASATIASLDDKMGLSEKLSIGTTVVNEKLRDIDER 197
Query: 648 FQVTERTKSAFATAEQTVSSAGTAVMKNRFVLTGVSWAAGAFNRVAKAAGEVSQKTKEKV 827
+QV E TKSA A AE+T SA TA+M N +V +G SW + AF V KA KEKV
Sbjct: 198 YQVREITKSALAAAEETAISARTALMANPYVSSGASWFSNAFGAVTKA-------VKEKV 250
Query: 828 E 830
E
Sbjct: 251 E 251
>TAIR9_protein||AT1G67950.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:25478884-25480420 REVERSE
Length = 279
Score = 195 bits (494), Expect = 6e-050
Identities = 110/241 (45%), Positives = 159/241 (65%), Gaps = 16/241 (6%)
Frame = +3
Query: 120 RSNSMAIRSVKVSNLSSGATEHGIKEFFSFSGEVESIDIQGNEHS---AYVTFKDPQGAE 290
+S +++VK+SN+S ++ +KEFFSFSG+++ ++++ AYVTFKD QGAE
Sbjct: 22 QSTVSGVKTVKISNVSLIVSKKDVKEFFSFSGDIQYVEMRSETQESQVAYVTFKDSQGAE 81
Query: 291 TAVLLSGASIADQSVIIEMAPNY-TPPAAPHAETQSGGGGGGVAESVVQKAEDVVSSMLA 467
TA+LL+GA IAD V I A NY PP A +++ G V+KAEDVV+ M+
Sbjct: 82 TAMLLTGAVIADLRVSITPAVNYQLPPEALALDSEHSFNGFS-----VKKAEDVVNIMVG 136
Query: 468 KGFILGKDAVGKAKAFDEKLGFTSTATAGVASIDQKIGLTQKITAGTSLVTEKIKGVDQS 647
+G+ LGKDA+ KAKAFD++ S A+A +AS+D K+GL++K++ GT++V EK++ +D+
Sbjct: 137 RGYALGKDAMEKAKAFDDRHNLISNASATIASLDDKMGLSEKLSIGTTVVNEKLRDIDER 196
Query: 648 FQVTERTKSAFATAEQTVSSAGTAVMKNRFVLTGVSWAAGAFNRVAKAAGEVSQKTKEKV 827
+QV E TKSA A AE+T SA TA+M N +V +G SW + AF V KA KEKV
Sbjct: 197 YQVREITKSALAAAEETAISARTALMANPYVSSGASWFSNAFGAVTKA-------VKEKV 249
Query: 828 E 830
E
Sbjct: 250 E 250
>TAIR9_protein||AT1G67950.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:25478884-25480072 REVERSE
Length = 280
Score = 195 bits (494), Expect = 6e-050
Identities = 110/241 (45%), Positives = 159/241 (65%), Gaps = 16/241 (6%)
Frame = +3
Query: 120 RSNSMAIRSVKVSNLSSGATEHGIKEFFSFSGEVESIDIQGNEHS---AYVTFKDPQGAE 290
+S +++VK+SN+S ++ +KEFFSFSG+++ ++++ AYVTFKD QGAE
Sbjct: 23 QSTVSGVKTVKISNVSLIVSKKDVKEFFSFSGDIQYVEMRSETQESQVAYVTFKDSQGAE 82
Query: 291 TAVLLSGASIADQSVIIEMAPNY-TPPAAPHAETQSGGGGGGVAESVVQKAEDVVSSMLA 467
TA+LL+GA IAD V I A NY PP A +++ G V+KAEDVV+ M+
Sbjct: 83 TAMLLTGAVIADLRVSITPAVNYQLPPEALALDSEHSFNGFS-----VKKAEDVVNIMVG 137
Query: 468 KGFILGKDAVGKAKAFDEKLGFTSTATAGVASIDQKIGLTQKITAGTSLVTEKIKGVDQS 647
+G+ LGKDA+ KAKAFD++ S A+A +AS+D K+GL++K++ GT++V EK++ +D+
Sbjct: 138 RGYALGKDAMEKAKAFDDRHNLISNASATIASLDDKMGLSEKLSIGTTVVNEKLRDIDER 197
Query: 648 FQVTERTKSAFATAEQTVSSAGTAVMKNRFVLTGVSWAAGAFNRVAKAAGEVSQKTKEKV 827
+QV E TKSA A AE+T SA TA+M N +V +G SW + AF V KA KEKV
Sbjct: 198 YQVREITKSALAAAEETAISARTALMANPYVSSGASWFSNAFGAVTKA-------VKEKV 250
Query: 828 E 830
E
Sbjct: 251 E 251
>TAIR9_protein||AT1G67950.4 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:25478884-25479778 REVERSE
Length = 220
Score = 168 bits (423), Expect = 1e-041
Identities = 96/193 (49%), Positives = 129/193 (66%), Gaps = 13/193 (6%)
Frame = +3
Query: 255 AYVTFKDPQGAETAVLLSGASIADQSVIIEMAPNY-TPPAAPHAETQSGGGGGGVAESVV 431
AYVTFKD QGAETA+LL+GA IAD V I A NY PP A +++ G V
Sbjct: 11 AYVTFKDSQGAETAMLLTGAVIADLRVSITPAVNYQLPPEALALDSEHSFNGFS-----V 65
Query: 432 QKAEDVVSSMLAKGFILGKDAVGKAKAFDEKLGFTSTATAGVASIDQKIGLTQKITAGTS 611
+KAEDVV+ M+ +G+ LGKDA+ KAKAFD++ S A+A +AS+D K+GL++K++ GT+
Sbjct: 66 KKAEDVVNIMVGRGYALGKDAMEKAKAFDDRHNLISNASATIASLDDKMGLSEKLSIGTT 125
Query: 612 LVTEKIKGVDQSFQVTERTKSAFATAEQTVSSAGTAVMKNRFVLTGVSWAAGAFNRVAKA 791
+V EK++ +D+ +QV E TKSA A AE+T SA TA+M N +V +G SW + AF V KA
Sbjct: 126 VVNEKLRDIDERYQVREITKSALAAAEETAISARTALMANPYVSSGASWFSNAFGAVTKA 185
Query: 792 AGEVSQKTKEKVE 830
KEKVE
Sbjct: 186 -------VKEKVE 191
>TAIR9_protein||AT5G32450.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:12079707-12081317 FORWARD
Length = 268
Score = 139 bits (349), Expect = 4e-033
Identities = 70/162 (43%), Positives = 105/162 (64%)
Frame = +3
Query: 339 IEMAPNYTPPAAPHAETQSGGGGGGVAESVVQKAEDVVSSMLAKGFILGKDAVGKAKAFD 518
+ M N P + TQ+ G + + V KA+DVV+++LAKG LG+DAV KAKAFD
Sbjct: 89 VRMLDNAMPLGLQESTTQTKTNMDGNSRAYVSKAQDVVATVLAKGSALGQDAVNKAKAFD 148
Query: 519 EKLGFTSTATAGVASIDQKIGLTQKITAGTSLVTEKIKGVDQSFQVTERTKSAFATAEQT 698
EK + A+A V+S D+++GLT+K++ G S V EK+K VDQ QV+++T +A AE+
Sbjct: 149 EKHQLRANASAKVSSFDKRVGLTEKLSVGISAVNEKVKSVDQKLQVSDKTMAAIFAAERK 208
Query: 699 VSSAGTAVMKNRFVLTGVSWAAGAFNRVAKAAGEVSQKTKEK 824
++ G+AV +R+V G +W +GAF++VA+ KTKEK
Sbjct: 209 LNDTGSAVKSSRYVTAGAAWFSGAFSKVARVGQVAGSKTKEK 250
Score = 79 bits (192), Expect = 6e-015
Identities = 43/76 (56%), Positives = 53/76 (69%), Gaps = 3/76 (3%)
Frame = +3
Query: 141 RSVKVSNLSSGATEHGIKEFFSFSGEVESIDIQ---GNEHSAYVTFKDPQGAETAVLLSG 311
RSV+V+N+S ATE I EFFSFSG++E I+IQ G A+VTF DP+ E A+LLSG
Sbjct: 5 RSVQVNNVSDLATEREIHEFFSFSGDIEHIEIQKEFGQSRIAFVTFTDPKALEIALLLSG 64
Query: 312 ASIADQSVIIEMAPNY 359
A+I DQ V I A NY
Sbjct: 65 ATIVDQIVTITRAENY 80
>TAIR9_protein||AT3G01210.1 | Symbols: | nucleic acid binding / oxidoreductase
| chr3:72182-73159 FORWARD
Length = 250
Score = 129 bits (322), Expect = 5e-030
Identities = 88/240 (36%), Positives = 128/240 (53%), Gaps = 27/240 (11%)
Frame = +3
Query: 150 KVSNLSSGATEHGIKEFFSFSGEVESIDI---QGNEHSAYVTFKDPQGAETAVLLSGASI 320
+V+NLS ATE + FFS G VE ++I QG+ +AYVTF+D + AVLLSGA+I
Sbjct: 9 QVTNLSPQATEKDVHRFFSHCGIVELVEITGCQGDALTAYVTFRDAYALDMAVLLSGATI 68
Query: 321 ADQSVIIEMAPNYTPPAAPHAE--------TQSGGGGGGVAESVVQKAEDVVSSMLAKGF 476
DQ+V I + Y + + T+S E++ A+ VV +MLAKG+
Sbjct: 69 VDQTVWISVYGVYLHESNNLRQEEDYSVTVTRSDAFASSPGEAIT-VAQQVVQTMLAKGY 127
Query: 477 ILGKDAVGKAKAFDEKLGFTSTATAGVASIDQKIGLTQKITAGTSLVTEKIKGVDQSFQV 656
+L KDA+GKAKA DE F+S +A I +GLTQ I + LV + D+ +
Sbjct: 128 VLSKDAIGKAKALDESQRFSSLVATKLAEISHYLGLTQNIQSSMELV----RSADEKYHF 183
Query: 657 TERTKSAF------ATAEQTV-----SSAGTAVMKNRFVLTGVSWAAGAFNRVAKAAGEV 803
++ TKSA A A T+ ++A T+V+ +R+ G W + A R AKAA +
Sbjct: 184 SDFTKSAVLVTGTAAVAAATITGKVAAAAATSVVNSRYFANGALWFSDALGRAAKAAAHI 243
>TAIR9_protein||AT1G14340.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:4897709-4898776 FORWARD
Length = 245
Score = 106 bits (262), Expect = 4e-023
Identities = 55/132 (41%), Positives = 82/132 (62%), Gaps = 4/132 (3%)
Frame = +3
Query: 417 AESVVQKAEDVVSSMLAKGFILGKDAVGKAKAFDEKLGFTSTATAGVASIDQKIGLTQKI 596
A V KA++VV MLA GF+LGKDA+ KAKAFDE G ++ A A V+ ++Q+IGLT KI
Sbjct: 113 AGEAVTKAQEVVKIMLATGFVLGKDALSKAKAFDESHGVSAAAVARVSQLEQRIGLTDKI 172
Query: 597 TAGTSLVTEKIKGVDQSFQVTERTKSAFATAEQTVSSAGTAVMKNRFVLTGVSWAAGAFN 776
G E ++ DQ + V++ KSA +T ++A T+V+ + + +G W +GA
Sbjct: 173 FTG----LEAVRMTDQRYHVSDTAKSAVFATGRTAAAAATSVVNSSYFSSGALWLSGALE 228
Query: 777 RVAKAAGEVSQK 812
R AKAA ++ +
Sbjct: 229 RAAKAASDLGTR 240
>TAIR9_protein||AT3G23900.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:8631941-8635852 REVERSE
Length = 988
Score = 49 bits (114), Expect = 6e-006
Identities = 33/144 (22%), Positives = 66/144 (45%), Gaps = 5/144 (3%)
Frame = +3
Query: 147 VKVSNLSSGATEHGIKEFFSFSGEVESIDIQGNEHSAYVTFKDPQGAETAVLLSGASIAD 326
++VSNLS T +++ FSF G V I ++H AY+ + + + A A+ L+ +
Sbjct: 353 LQVSNLSPSLTTEQLRQLFSFCGTVVDCSITDSKHIAYIEYSNSEEATAALALNNTEVFG 412
Query: 327 QSVIIEMAPNYTPPAAPHAETQSGGGGGGVAESVVQKAEDVVSSMLAKGFILGKDAVGKA 506
+++ +E+A + P P + S + ++V + ++L + + + A +A
Sbjct: 413 RALNVEIAKSL--PHKPSSNNSSSSLPLMMQQAVAMQQMQFQQAILMQQAVATQQAANRA 470
Query: 507 KAFDEKLGFTSTATAGVASIDQKI 578
T A A A I +K+
Sbjct: 471 ATMKSA---TELAAARAAEISRKL 491
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,440,354,295
Number of Sequences: 33410
Number of Extensions: 1440354295
Number of Successful Extensions: 53408341
Number of sequences better than 0.0: 0
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