BLASTX 7.6.2
Query= UN01417 /QuerySize=1028
(1027 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G27470.1 | Symbols: | zinc finger (C3HC4-type... 330 1e-090
TAIR9_protein||AT1G19310.1 | Symbols: | zinc finger (C3HC4-type... 80 2e-015
TAIR9_protein||AT4G03510.1 | Symbols: RMA1 | RMA1; protein bindi... 79 5e-015
TAIR9_protein||AT4G03510.2 | Symbols: RMA1 | RMA1; protein bindi... 79 5e-015
TAIR9_protein||AT4G28270.1 | Symbols: | zinc finger (C3HC4-type... 77 2e-014
TAIR9_protein||AT2G23780.1 | Symbols: | zinc finger (C3HC4-type... 76 3e-014
TAIR9_protein||AT1G74990.1 | Symbols: | zinc finger (C3HC4-type... 75 5e-014
TAIR9_protein||AT3G58030.1 | Symbols: | zinc finger (C3HC4-type... 72 7e-013
TAIR9_protein||AT3G58030.2 | Symbols: | zinc finger (C3HC4-type... 72 7e-013
TAIR9_protein||AT3G58030.3 | Symbols: | zinc finger (C3HC4-type... 72 7e-013
TAIR9_protein||AT2G42030.1 | Symbols: | zinc finger (C3HC4-type... 70 3e-012
TAIR9_protein||AT2G44410.1 | Symbols: | protein binding / zinc ... 60 2e-009
>TAIR9_protein||AT4G27470.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr4:13735576-13736307 FORWARD
Length = 244
Score = 330 bits (845), Expect = 1e-090
Identities = 184/263 (69%), Positives = 198/263 (75%), Gaps = 34/263 (12%)
Frame = +1
Query: 85 MEGNFFSSDDAQR-DDDGSTVKQKPN----PTESQSNESSGCFDCNICLDTALDPVVTLC 249
MEGNFF DAQR D+G KQKPN PT Q+NE SGCFDCNICLDTA DPVVTLC
Sbjct: 1 MEGNFFIRSDAQRAHDNGFIAKQKPNLTTAPTAGQANE-SGCFDCNICLDTAHDPVVTLC 59
Query: 250 GHLFCWPCIYKWLHVQLSSSSLSIDHHHHHHQNNNNNNNNNNNCPVCKSNIAITSLVPLY 429
GHLFCWPCIYKWLHVQL SS+S+D H NNCPVCKSNI ITSLVPLY
Sbjct: 60 GHLFCWPCIYKWLHVQL--SSVSVDQH-------------QNNCPVCKSNITITSLVPLY 104
Query: 430 GRGISSPS--FDSKEQE---NSIPRRPSPS--NNP---TSPDLPLRQHRTMSPTFHNHHR 579
GRG+SSPS F SK+Q+ IPRRP+PS NP S P QH+T+SP+FHN H+
Sbjct: 105 GRGMSSPSSTFGSKKQDALSTDIPRRPAPSALRNPITSASSLNPSLQHQTLSPSFHN-HQ 163
Query: 580 YSSRGFTTTTESTDLANAVMMSLLYPVIGMFGDMVYTRIFGTFTNAIAQPYQQNQRMMQT 759
YS RGF TTTESTDLANAVMMS LYPVIGMFGD+VYTRIFGTFTN IAQPY Q+QRMMQ
Sbjct: 164 YSPRGF-TTTESTDLANAVMMSFLYPVIGMFGDLVYTRIFGTFTNTIAQPY-QSQRMMQR 221
Query: 760 EKSLNRVSIFFFFCIFLCLLLF* 828
EKSLNRVSIFF CI LCLLLF*
Sbjct: 222 EKSLNRVSIFFLCCIILCLLLF* 244
>TAIR9_protein||AT1G19310.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:6676424-6677104 REVERSE
Length = 227
Score = 80 bits (195), Expect = 2e-015
Identities = 33/62 (53%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Frame = +1
Query: 136 STVKQKPNPTESQSNESSGCFDCNICLDTALDPVVTLCGHLFCWPCIYKWLHVQLSSSSL 315
S V + ++ +N+SS F+CNICLD A DP+VTLCGHLFCWPC+YKWLH+ S
Sbjct: 2 SDVPSCSSGNDTNNNDSSN-FECNICLDLAQDPIVTLCGHLFCWPCLYKWLHLHSQSKDC 60
Query: 316 SI 321
+
Sbjct: 61 PV 62
>TAIR9_protein||AT4G03510.1 | Symbols: RMA1 | RMA1; protein binding /
ubiquitin-protein ligase/ zinc ion binding | chr4:1557905-1558654
REVERSE
Length = 250
Score = 79 bits (192), Expect = 5e-015
Identities = 38/70 (54%), Positives = 45/70 (64%), Gaps = 8/70 (11%)
Frame = +1
Query: 148 QKPNP----TESQSNESSGCFDCNICLDTALDPVVTLCGHLFCWPCIYKWLHVQLSSSSL 315
+KP P S + S FDCNICLD+ +PVVTLCGHLFCWPCI+KWL VQ S+S
Sbjct: 27 KKPEPITVSVPSDDTDDSN-FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTS- 84
Query: 316 SIDHHHHHHQ 345
D + H Q
Sbjct: 85 --DEYQRHRQ 92
>TAIR9_protein||AT4G03510.2 | Symbols: RMA1 | RMA1; protein binding /
ubiquitin-protein ligase/ zinc ion binding | chr4:1557905-1558654
REVERSE
Length = 250
Score = 79 bits (192), Expect = 5e-015
Identities = 38/70 (54%), Positives = 45/70 (64%), Gaps = 8/70 (11%)
Frame = +1
Query: 148 QKPNP----TESQSNESSGCFDCNICLDTALDPVVTLCGHLFCWPCIYKWLHVQLSSSSL 315
+KP P S + S FDCNICLD+ +PVVTLCGHLFCWPCI+KWL VQ S+S
Sbjct: 27 KKPEPITVSVPSDDTDDSN-FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTS- 84
Query: 316 SIDHHHHHHQ 345
D + H Q
Sbjct: 85 --DEYQRHRQ 92
>TAIR9_protein||AT4G28270.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr4:14007614-14008195 REVERSE
Length = 194
Score = 77 bits (187), Expect = 2e-014
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +1
Query: 181 ESSGCFDCNICLDTALDPVVTLCGHLFCWPCIYKWLHVQLSSSSLSIDHHHHHHQ 345
+S G FDCNICLD DPVVTLCGHLFCWPCI+KW + ++S +D + H +
Sbjct: 14 DSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYAS-NNSRQRVDQYDHKRE 67
>TAIR9_protein||AT2G23780.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr2:10123551-10124234 REVERSE
Length = 228
Score = 76 bits (186), Expect = 3e-014
Identities = 27/52 (51%), Positives = 38/52 (73%)
Frame = +1
Query: 136 STVKQKPNPTESQSNESSGCFDCNICLDTALDPVVTLCGHLFCWPCIYKWLH 291
S+ + + + +N+ G F+CNIC + A DP+VTLCGHLFCWPC+Y+WLH
Sbjct: 6 SSTSTSYSDSNNDTNDQGGDFECNICFELAQDPIVTLCGHLFCWPCLYRWLH 57
>TAIR9_protein||AT1G74990.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:28159837-28160250 REVERSE
Length = 138
Score = 75 bits (184), Expect = 5e-014
Identities = 28/51 (54%), Positives = 38/51 (74%)
Frame = +1
Query: 157 NPTESQSNESSGCFDCNICLDTALDPVVTLCGHLFCWPCIYKWLHVQLSSS 309
N ++ +++S F CNICL+ A +P+VTLCGHLFCWPC+YKWLH S+
Sbjct: 4 NTITNEEDDASNNFGCNICLELAREPIVTLCGHLFCWPCLYKWLHYHSKSN 54
>TAIR9_protein||AT3G58030.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:21485527-21486837 FORWARD
Length = 437
Score = 72 bits (174), Expect = 7e-013
Identities = 27/54 (50%), Positives = 34/54 (62%)
Frame = +1
Query: 133 GSTVKQKPNPTESQSNESSGCFDCNICLDTALDPVVTLCGHLFCWPCIYKWLHV 294
G V K E S FDCNICLD + +PV+T CGHL+CWPC+Y+WL +
Sbjct: 116 GDGVLDKKADVEKSSGSDGNFFDCNICLDLSKEPVLTCCGHLYCWPCLYQWLQI 169
>TAIR9_protein||AT3G58030.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:21485527-21486837 FORWARD
Length = 437
Score = 72 bits (174), Expect = 7e-013
Identities = 27/54 (50%), Positives = 34/54 (62%)
Frame = +1
Query: 133 GSTVKQKPNPTESQSNESSGCFDCNICLDTALDPVVTLCGHLFCWPCIYKWLHV 294
G V K E S FDCNICLD + +PV+T CGHL+CWPC+Y+WL +
Sbjct: 116 GDGVLDKKADVEKSSGSDGNFFDCNICLDLSKEPVLTCCGHLYCWPCLYQWLQI 169
>TAIR9_protein||AT3G58030.3 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:21485527-21486837 FORWARD
Length = 437
Score = 72 bits (174), Expect = 7e-013
Identities = 27/54 (50%), Positives = 34/54 (62%)
Frame = +1
Query: 133 GSTVKQKPNPTESQSNESSGCFDCNICLDTALDPVVTLCGHLFCWPCIYKWLHV 294
G V K E S FDCNICLD + +PV+T CGHL+CWPC+Y+WL +
Sbjct: 116 GDGVLDKKADVEKSSGSDGNFFDCNICLDLSKEPVLTCCGHLYCWPCLYQWLQI 169
>TAIR9_protein||AT2G42030.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr2:17539069-17540346 REVERSE
Length = 426
Score = 70 bits (169), Expect = 3e-012
Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 6/68 (8%)
Frame = +1
Query: 109 DDAQRDDDGSTVKQKPNPTESQSN------ESSGCFDCNICLDTALDPVVTLCGHLFCWP 270
+D+++ ++GS V + N TE + + FDC ICLD + DPVVT CGHL+CW
Sbjct: 104 EDSKKCENGSKVMAEDNVTEEKRDVEKSVGSDGSFFDCYICLDLSKDPVVTNCGHLYCWS 163
Query: 271 CIYKWLHV 294
C+Y+WL V
Sbjct: 164 CLYQWLQV 171
>TAIR9_protein||AT2G44410.1 | Symbols: | protein binding / zinc ion binding |
chr2:18328873-18330114 FORWARD
Length = 414
Score = 60 bits (145), Expect = 2e-009
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +1
Query: 166 ESQSNESSGCFDCNICLDTALDPVVTLCGHLFCWPCIYK 282
E S+ G FDCNICL+ A DP++T CGHLFCW C Y+
Sbjct: 113 EKTSSVPGGFFDCNICLEKAEDPILTCCGHLFCWGCFYQ 151
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,483,433,957
Number of Sequences: 33410
Number of Extensions: 1483433957
Number of Successful Extensions: 53426632
Number of sequences better than 0.0: 0
|
