BLASTX 7.6.2
Query= UN01756 /QuerySize=1442
(1441 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G53720.1 | Symbols: ATCYP59, CYP59 | CYP59 (CY... 439 2e-123
TAIR9_protein||AT2G36130.1 | Symbols: | peptidyl-prolyl cis-tra... 127 2e-029
TAIR9_protein||AT3G44600.1 | Symbols: CYP71 | CYP71 (CYCLOPHILIN... 117 3e-026
TAIR9_protein||AT5G67530.1 | Symbols: | peptidyl-prolyl cis-tra... 107 2e-023
TAIR9_protein||AT4G33060.1 | Symbols: | peptidyl-prolyl cis-tra... 107 3e-023
TAIR9_protein||AT1G01940.1 | Symbols: | peptidyl-prolyl cis-tra... 106 4e-023
TAIR9_protein||AT1G53780.1 | Symbols: | ATP binding / ATPase/ h... 86 7e-017
TAIR9_protein||AT1G44478.1 | Symbols: | FUNCTIONS IN: molecular... 58 2e-008
TAIR9_protein||AT1G56085.1 | Symbols: | FUNCTIONS IN: molecular... 53 4e-007
TAIR9_protein||AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP... 53 5e-007
TAIR9_protein||AT4G39260.2 | Symbols: CCR1, ATGRP8, GRP8 | GR-RB... 52 1e-006
>TAIR9_protein||AT1G53720.1 | Symbols: ATCYP59, CYP59 | CYP59 (CYCLOPHILIN 59);
RNA binding / nucleic acid binding / peptidyl-prolyl cis-trans
isomerase | chr1:20057012-20059508 FORWARD
Length = 507
Score = 439 bits (1129), Expect = 2e-123
Identities = 218/266 (81%), Positives = 232/266 (87%), Gaps = 4/266 (1%)
Frame = +2
Query: 644 NIRIKHTYILEDPFEDPTQLAERIPDASPEGKPKEEVEIDVRLEDDWVPMDEQLDVHELE 823
NIRIKHT+IL+DPF+DP QLAE +PDASPEGKPKEEV+ DVRLEDDWVPMDE+L ELE
Sbjct: 153 NIRIKHTHILDDPFDDPPQLAEMMPDASPEGKPKEEVKDDVRLEDDWVPMDEELGAQELE 212
Query: 824 EVIREKAAHSSAVVLESIGDIPEAEVKPPENVLFVCKLNPVTEDEDLHTIFSRFGTVISA 1003
EVIREKAAHSSAVVLESIGDIPEAEVKPP+NVLFVCKLNPVTEDEDLHTIFSRFGTV+SA
Sbjct: 213 EVIREKAAHSSAVVLESIGDIPEAEVKPPDNVLFVCKLNPVTEDEDLHTIFSRFGTVVSA 272
Query: 1004 DVIRDFKTGDSLCYAFIEFEENAACEQAYNKMGNALIVDRRIHVDFSQSVSKLWSQFRQK 1183
DVIRDFKTGDSLCYAFIEFE +CEQAY KM NALI DRRIHVDFSQSVSKLWSQFRQK
Sbjct: 273 DVIRDFKTGDSLCYAFIEFENKESCEQAYFKMDNALIDDRRIHVDFSQSVSKLWSQFRQK 332
Query: 1184 GSQKGKGGNGCFKCGSADHVAKDCVGGGNQGSKFIVKDQNRQHGGGEGYDMVFEGDIAER 1363
SQKGK GNGCFKCGS DH+AKDCVGG SKFIVKDQNRQHGGGEGY+MVFEGD+ E
Sbjct: 333 DSQKGK-GNGCFKCGSTDHIAKDCVGG--PSSKFIVKDQNRQHGGGEGYEMVFEGDVHET 389
Query: 1364 PKREKREHSHDKDKIRSRRPRGYGEG 1441
PK E +KI+ R P G GEG
Sbjct: 390 PKHNSHERER-SEKIQRRSPHGNGEG 414
Score = 285 bits (729), Expect = 5e-077
Identities = 139/160 (86%), Positives = 145/160 (90%)
Frame = +1
Query: 190 MSVLIVTSLGDIVIDLYSTKCPLTCKNFLKLCKIKYYNGCLFHTVQKDFTAQTGDPTGTG 369
MSVLIVTSLGDIVIDL+S KCPLTCKNFLKLCKIKYYNGCLFHTVQKDFTAQTGDPTGTG
Sbjct: 1 MSVLIVTSLGDIVIDLHSDKCPLTCKNFLKLCKIKYYNGCLFHTVQKDFTAQTGDPTGTG 60
Query: 370 LGGDSIYKLLYGEQARFFRDEIHLDLKHSKTGTVAMASGGENLNASQFYFTLRDYLDYLD 549
GGDSIYK LYGEQARF++DEIHLDLKHSKTGTVAMASGGENLNASQFYFTLRD LDYLD
Sbjct: 61 AGGDSIYKFLYGEQARFYKDEIHLDLKHSKTGTVAMASGGENLNASQFYFTLRDDLDYLD 120
Query: 550 GKHTVFGEIAEGLDTLTRINEAYVDAKTDLIKH*NQAHLY 669
GKHTVFG+IAEG DTLTRINEAYVD K K+ H +
Sbjct: 121 GKHTVFGQIAEGFDTLTRINEAYVDPKNRPYKNIRIKHTH 160
>TAIR9_protein||AT2G36130.1 | Symbols: | peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative |
chr2:15166863-15168259 FORWARD
Length = 165
Score = 127 bits (318), Expect = 2e-029
Identities = 62/143 (43%), Positives = 86/143 (60%), Gaps = 8/143 (5%)
Frame = +1
Query: 196 VLIVTSLGDIVIDLYSTKCPLTCKNFLKLCKIKYYNGCLFHTVQKDFTAQTGDPTGTGLG 375
V + TS+G +++Y P TC+NFL+L + YY+ LFH + KDF Q GDPTGTG G
Sbjct: 12 VTLETSMGPFTVEMYYKHSPRTCRNFLELSRRGYYDNVLFHRIVKDFIVQGGDPTGTGRG 71
Query: 376 GDSIYKLLYGEQARFFRDEIHLDLKHSKTGTVAMASGGENLNASQFYFTLRDYLDYLDGK 555
G+SIY F DEI+ +LKH+ G ++MA+ G N N SQF+ TL LDGK
Sbjct: 72 GESIY-------GSKFEDEINKELKHTGAGILSMANAGPNTNGSQFFITLAPQ-PSLDGK 123
Query: 556 HTVFGEIAEGLDTLTRINEAYVD 624
HT+FG + G++ + R+ D
Sbjct: 124 HTIFGRVCRGMEVIKRLGSVQTD 146
>TAIR9_protein||AT3G44600.1 | Symbols: CYP71 | CYP71 (CYCLOPHILIN71); chromatin
binding / histone binding / peptidyl-prolyl cis-trans isomerase |
chr3:16165368-16169201 REVERSE
Length = 632
Score = 117 bits (291), Expect = 3e-026
Identities = 61/144 (42%), Positives = 84/144 (58%), Gaps = 8/144 (5%)
Frame = +1
Query: 193 SVLIVTSLGDIVIDLYSTKCPLTCKNFLKLCKIKYYNGCLFHTVQKDFTAQTGDPTGTGL 372
+V++ T+LGDI + LY +CP T +NF C+ YY+ LFH V + F QTGDP G G
Sbjct: 477 NVIMHTTLGDIHMKLYPEECPKTVENFTTHCRNGYYDNHLFHRVIRGFMIQTGDPLGDGT 536
Query: 373 GGDSIYKLLYGEQARFFRDEIHLDLKHSKTGTVAMASGGENLNASQFYFTLRDYLDYLDG 552
GG SI+ R F DE H L+H + T++MA+ G N N SQF+ T +LD
Sbjct: 537 GGQSIW-------GREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFIT-TVATPWLDN 588
Query: 553 KHTVFGEIAEGLDTLTRINEAYVD 624
KHTVFG + +G+D + I + D
Sbjct: 589 KHTVFGRVVKGMDVVQGIEKVKTD 612
>TAIR9_protein||AT5G67530.1 | Symbols: | peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein | chr5:26941260-26943878 FORWARD
Length = 596
Score = 107 bits (267), Expect = 2e-023
Identities = 60/139 (43%), Positives = 81/139 (58%), Gaps = 8/139 (5%)
Frame = +1
Query: 208 TSLGDIVIDLYSTKCPLTCKNFLKLCKIKYYNGCLFHTVQKDFTAQTGDPTGTGLGGDSI 387
T+ GD+ I+L+ P C+NF+ LC+ YYNG FH ++F Q GDPTGTG GG+SI
Sbjct: 350 TTHGDLNIELHCDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQGGDPTGTGKGGESI 409
Query: 388 YKLLYGEQARFFRDEIHLDLKHSKTGTVAMASGGENLNASQFYFTLRDYLDYLDGKHTVF 567
+ + F+DE + L HS G V+MA+ G + N SQF F L +L+ KHTVF
Sbjct: 410 W-------GKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQF-FVLYKSATHLNYKHTVF 461
Query: 568 GEIAEGLDTLTRINEAYVD 624
G + GL TL + VD
Sbjct: 462 GGVVGGLATLAAMENVPVD 480
>TAIR9_protein||AT4G33060.1 | Symbols: | peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein | chr4:15948535-15951954 FORWARD
Length = 505
Score = 107 bits (265), Expect = 3e-023
Identities = 63/153 (41%), Positives = 88/153 (57%), Gaps = 12/153 (7%)
Frame = +1
Query: 184 TNMSVLIVTSLGDIVIDLYSTKCPLTCKNFLKLCKIKYYNGCLFHTVQKDFTAQTGDPTG 363
T V++ T+ G I ++L+ + P + +NF++LC Y++ +FH V F Q GDPTG
Sbjct: 11 TKGKVIVNTTHGPIDVELWPKEAPKSVRNFVQLCLEGYFDNTIFHRVIPGFLVQGGDPTG 70
Query: 364 TGLGGDSIYKLLYGEQARFFRDEIHLDLKHSKTGTVAMASGGE-NLNASQFYFTLRDYLD 540
+G GGDSIY F DE H L+ S G VAMA+ N N SQF+FTL D D
Sbjct: 71 SGTGGDSIY-------GGVFADEFHSRLRFSHRGIVAMANASSPNSNGSQFFFTL-DKCD 122
Query: 541 YLDGKHTVFGEI-AEGLDTLTRINEAYVDAKTD 636
+LD KHT+FG++ + + L R+ E VD D
Sbjct: 123 WLDKKHTIFGKVTGDSIYNLLRLGE--VDTSKD 153
>TAIR9_protein||AT1G01940.1 | Symbols: | peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein | chr1:323082-324719 FORWARD
Length = 161
Score = 106 bits (264), Expect = 4e-023
Identities = 56/136 (41%), Positives = 80/136 (58%), Gaps = 8/136 (5%)
Frame = +1
Query: 190 MSVLIVTSLGDIVIDLYSTKCPLTCKNFLKLCKIKYYNGCLFHTVQKDFTAQTGDPTGTG 369
MSV + T+LGDI +++ + P + +NFL LC YY+G +FH K F Q GDP GTG
Sbjct: 1 MSVTLHTNLGDIKCEIFCDEVPKSAENFLALCASGYYDGTIFHRNIKGFMIQGGDPKGTG 60
Query: 370 LGGDSIYKLLYGEQARFFRDEIHLDLKHSKTGTVAMASGGENLNASQFYFTLRDYLDYLD 549
GG SI+ + F DEI LKH+ G ++MA+ G N N SQF+ T +L+
Sbjct: 61 KGGTSIW-------GKKFNDEIRDSLKHNARGMLSMANSGPNTNGSQFFITYAKQ-PHLN 112
Query: 550 GKHTVFGEIAEGLDTL 597
G +T+FG++ G + L
Sbjct: 113 GLYTIFGKVIHGFEVL 128
>TAIR9_protein||AT1G53780.1 | Symbols: | ATP binding / ATPase/ hydrolase/
nucleoside-triphosphatase/ nucleotide binding / peptidyl-prolyl
cis-trans isomerase | chr1:20074212-20077235 REVERSE
Length = 599
Score = 86 bits (210), Expect = 7e-017
Identities = 48/93 (51%), Positives = 59/93 (63%), Gaps = 6/93 (6%)
Frame = +2
Query: 644 NIRIKHTYILEDPFEDPTQLAERIPDASPEGKPKEEVEIDVRLEDDWVPMDEQLDVHELE 823
+IRI+HTYIL DPF+DP QLA+ IPDASP+GKPK EV D++ +DW D + D EL
Sbjct: 58 DIRIRHTYILTDPFDDPPQLAKMIPDASPKGKPKVEVTDDMQPREDWDIRDAEFDFLELN 117
Query: 824 EVIREKAAHSSAVVLES--IGDIPEAEVKPPEN 916
E E AA+ V + S I DI E PEN
Sbjct: 118 EAFAEMAANPVEVAINSMIIRDIME----DPEN 146
Score = 72 bits (174), Expect = 1e-012
Identities = 40/65 (61%), Positives = 44/65 (67%)
Frame = +1
Query: 475 MASGGENLNASQFYFTLRDYLDYLDGKHTVFGEIAEGLDTLTRINEAYVDAKTDLIKH*N 654
MAS GENLNASQFY TL D LD LDGK+TVFG+I G +TLT I +A VDAK K
Sbjct: 1 MASFGENLNASQFYITLCDDLDCLDGKYTVFGKITSGFETLTCIAKASVDAKNRPNKDIR 60
Query: 655 QAHLY 669
H Y
Sbjct: 61 IRHTY 65
>TAIR9_protein||AT1G44478.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana protein match is:
CYP59 (CYCLOPHILIN 59); RNA binding / nucleic acid binding /
peptidyl-prolyl cis-trans isomerase (TAIR:AT1G53720.1); Has 293 Blast
hits to 276 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa -
216; Fungi - 11; Plants - 38; Viruses - 0; Other Eukaryotes - 28
(source: NCBI BLink). | chr1:16852341-16853238 REVERSE
Length = 194
Score = 58 bits (138), Expect = 2e-008
Identities = 29/54 (53%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Frame = +1
Query: 304 GCLFHTVQKDFTAQTGDPTGTGLGGDSIYKLLYGE--QARFFRD-EIHLDLKHS 456
GC+F VQK F AQTGDPTGTG GDSIY+ L+G+ F D +IH+ S
Sbjct: 14 GCVFQNVQKGFIAQTGDPTGTGTSGDSIYRFLHGDHMDGTFIDDRKIHVGFNQS 67
>TAIR9_protein||AT1G56085.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana protein match is:
CYP59 (CYCLOPHILIN 59); RNA binding / nucleic acid binding /
peptidyl-prolyl cis-trans isomerase (TAIR:AT1G53720.1); Has 5 Blast
hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 1;
Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink). | chr1:20976515-20977541 FORWARD
Length = 154
Score = 53 bits (126), Expect = 4e-007
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = +1
Query: 286 KIKYYNGCLFHTVQKDFTAQTGD 354
+IKYYNGCLFHTVQKDFTAQTGD
Sbjct: 11 RIKYYNGCLFHTVQKDFTAQTGD 33
>TAIR9_protein||AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | GR-RBP8;
RNA binding / nucleic acid binding / nucleotide binding |
chr4:18274166-18274958 REVERSE
Length = 170
Score = 53 bits (125), Expect = 5e-007
Identities = 39/118 (33%), Positives = 53/118 (44%), Gaps = 10/118 (8%)
Frame = +2
Query: 923 FVCKLNPVTEDEDLHTIFSRFGTVISADVIRDFKTGDSLCYAFIEFEENAACEQAYNKMG 1102
FV L T DEDL FS+FG VI + +I D ++G S + F+ F++ A A +M
Sbjct: 9 FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMN 68
Query: 1103 NALIVDRRIHVDFSQSVSKLWSQFRQKGSQKGKGGNGCFKCGSADHVAKDCVGGGNQG 1276
+ R I V+ +QS +GS G GG G G GGG G
Sbjct: 69 GKELDGRVITVNEAQS----------RGSGGGGGGRGGSGGGYRSGGGGGYSGGGGGG 116
>TAIR9_protein||AT4G39260.2 | Symbols: CCR1, ATGRP8, GRP8 | GR-RBP8; RNA binding
/ nucleic acid binding / nucleotide binding | chr4:18274166-18274958
REVERSE
Length = 127
Score = 52 bits (122), Expect = 1e-006
Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
Frame = +2
Query: 923 FVCKLNPVTEDEDLHTIFSRFGTVISADVIRDFKTGDSLCYAFIEFEENAACEQAYNKMG 1102
FV L T DEDL FS+FG VI + +I D ++G S + F+ F++ A A +M
Sbjct: 9 FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMN 68
Query: 1103 NALIVDRRIHVDFSQSVSKLWSQFRQKGSQKG--KGGNGCFKCGSADHVAKDCVGGG 1267
+ R I V+ +QS + GS G GG G + G + GGG
Sbjct: 69 GKELDGRVITVNEAQSRGSGGGGGGRGGSGGGYRSGGGGGYSGGGGGGYSGGGGGGG 125
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,569,490,390
Number of Sequences: 33410
Number of Extensions: 1569490390
Number of Successful Extensions: 53458418
Number of sequences better than 0.0: 0
|
