BLASTX 7.6.2
Query= UN01946 /QuerySize=540
(539 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G51055.1 | Symbols: | FUNCTIONS IN: molecular... 159 2e-039
TAIR9_protein||AT1G50980.1 | Symbols: | F-box family protein | ... 130 8e-031
TAIR9_protein||AT5G56800.1 | Symbols: | FUNCTIONS IN: molecular... 122 2e-028
TAIR9_protein||AT5G56560.1 | Symbols: | F-box family protein | ... 96 9e-021
TAIR9_protein||AT5G56570.1 | Symbols: | FUNCTIONS IN: molecular... 94 5e-020
TAIR9_protein||AT1G32375.1 | Symbols: | F-box family protein | ... 91 4e-019
TAIR9_protein||AT5G38580.1 | Symbols: | FUNCTIONS IN: molecular... 88 3e-018
TAIR9_protein||AT5G56400.1 | Symbols: | F-box family protein | ... 86 1e-017
TAIR9_protein||AT4G26340.1 | Symbols: | F-box family protein | ... 83 8e-017
TAIR9_protein||AT5G56452.1 | Symbols: | FUNCTIONS IN: molecular... 83 1e-016
TAIR9_protein||AT5G56452.2 | Symbols: | FUNCTIONS IN: molecular... 83 1e-016
TAIR9_protein||AT3G50710.1 | Symbols: | F-box family protein | ... 82 2e-016
TAIR9_protein||AT5G38590.2 | Symbols: | F-box family protein | ... 82 2e-016
TAIR9_protein||AT3G53550.1 | Symbols: | FUNCTIONS IN: molecular... 76 1e-014
TAIR9_protein||AT5G56325.1 | Symbols: | FUNCTIONS IN: molecular... 71 3e-013
TAIR9_protein||AT5G56380.1 | Symbols: | F-box family protein | ... 71 4e-013
TAIR9_protein||AT4G10400.1 | Symbols: | F-box family protein | ... 69 2e-012
TAIR9_protein||AT4G10420.1 | Symbols: | FUNCTIONS IN: molecular... 69 2e-012
TAIR9_protein||AT4G10400.2 | Symbols: | F-box family protein | ... 69 2e-012
TAIR9_protein||AT3G49480.1 | Symbols: | FUNCTIONS IN: molecular... 68 4e-012
>TAIR9_protein||AT1G51055.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: FBD
(InterPro:IPR013596), FBD-like (InterPro:IPR006566); BEST Arabidopsis
thaliana protein match is: unknown protein (TAIR:AT5G56800.1); Has 247
Blast hits to 244 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 247; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr1:18925286-18926315 REVERSE
Length = 162
Score = 159 bits (400), Expect = 2e-039
Identities = 76/117 (64%), Positives = 92/117 (78%), Gaps = 3/117 (2%)
Frame = -2
Query: 538 SSDWWNLLTLILNDAPRLRVLKLNLFQEHCVQH-DGMVSWNKPSFVPECLSSHLEIFEWR 362
S++WWNLLT IL+DAP+LRVLKL L+++HCV++ + M W +P +VP CLSS+LEIFEWR
Sbjct: 46 STEWWNLLTCILDDAPKLRVLKLKLYRKHCVEYNESMEPWKQPDYVPICLSSYLEIFEWR 105
Query: 361 QYKGTETEREAAKYILANGSHLKKAAFYSESAEKQGMLKELECVARDS--CTFVFE* 197
QY G E ERE AKYIL N S LKKA FY ESAEK G+LKELEC+AR S C VF+*
Sbjct: 106 QYNGEEQEREVAKYILENASRLKKAIFYLESAEKHGILKELECMARGSKKCQLVFD* 162
>TAIR9_protein||AT1G50980.1 | Symbols: | F-box family protein |
chr1:18900541-18902057 REVERSE
Length = 371
Score = 130 bits (325), Expect = 8e-031
Identities = 63/100 (63%), Positives = 76/100 (76%)
Frame = -2
Query: 538 SSDWWNLLTLILNDAPRLRVLKLNLFQEHCVQHDGMVSWNKPSFVPECLSSHLEIFEWRQ 359
S++ WNLLT ILN APRLRVL+L L+ +HCV+ + N+P +P+ LSSHLEI EWRQ
Sbjct: 256 SAEQWNLLTRILNYAPRLRVLQLKLYHKHCVKDTKNLMGNQPDLIPKSLSSHLEILEWRQ 315
Query: 358 YKGTETEREAAKYILANGSHLKKAAFYSESAEKQGMLKEL 239
Y T EREAAKYILAN S L+KA FY+ES EK GMLKE+
Sbjct: 316 YNDTAQEREAAKYILANASGLRKATFYTESTEKHGMLKEV 355
>TAIR9_protein||AT5G56800.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: FBD
(InterPro:IPR013596), FBD-like (InterPro:IPR006566), Leucine-rich
repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match
is: F-box family protein (TAIR:AT5G56560.1); Has 519 Blast hits to 504
proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
4; Plants - 515; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink). | chr5:22972989-22974208 FORWARD
Length = 345
Score = 122 bits (304), Expect = 2e-028
Identities = 69/118 (58%), Positives = 79/118 (66%), Gaps = 6/118 (5%)
Frame = -2
Query: 538 SSDWWNLLTLILNDAPRLRVLKLNLFQEHCVQ--HDGMVSWNKPSFVPECLSSHLEIFEW 365
S DWWNLL IL DAPRL+VLKL L +CVQ + M WN+P VP+CLSSHLEIFEW
Sbjct: 230 SQDWWNLLNRILEDAPRLQVLKLKL--GNCVQCSTELMDYWNEPCSVPKCLSSHLEIFEW 287
Query: 364 RQYKGTETEREAAKYILANGSHLKKAAFYSESAEKQGMLKELECVARDS--CTFVFE* 197
R YKGT+ ER+ AKYILA S LK A F S EK + K+LE V R S C VF+*
Sbjct: 288 RHYKGTKQERKVAKYILAKASCLKVAIFSSVCIEKNLIFKKLENVDRGSKACELVFQ* 345
>TAIR9_protein||AT5G56560.1 | Symbols: | F-box family protein |
chr5:22899724-22901985 FORWARD
Length = 608
Score = 96 bits (238), Expect = 9e-021
Identities = 57/118 (48%), Positives = 71/118 (60%), Gaps = 6/118 (5%)
Frame = -2
Query: 538 SSDWWNLLTLILNDAPRLRVLKLNLFQEHCVQH-DGMVSWNKPSFVPECLSSHLEIFEWR 362
S+ W NL ILN AP LR LKL +H + D M W +P+ V +CLS HLEIFEWR
Sbjct: 493 SARWANLFACILNAAPELRSLKLK--SKHKFNYNDPMTLWEEPAVVAKCLSEHLEIFEWR 550
Query: 361 QYKGTETEREAAKYILANGSHLKKAAFYSESAEK-QGMLKELECVARDS--CTFVFE* 197
QY+GTE ER A YILAN + LK A F + + MLK+L+ + R S C VF+*
Sbjct: 551 QYEGTEQERNVAGYILANATCLKMATFSTRCRNRNHRMLKKLKSMDRVSKACRLVFD* 608
>TAIR9_protein||AT5G56570.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596),
Cyclin-like F-box (InterPro:IPR001810), FBD-like (InterPro:IPR006566);
BEST Arabidopsis thaliana protein match is: F-box family protein
(TAIR:AT5G56560.1); Has 445 Blast hits to 429 proteins in 9 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 440; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink). |
chr5:22902736-22904404 FORWARD
Length = 440
Score = 94 bits (232), Expect = 5e-020
Identities = 52/117 (44%), Positives = 71/117 (60%), Gaps = 5/117 (4%)
Frame = -2
Query: 538 SSDWWNLLTLILNDAPRLRVLKLNLFQEHCVQHDGMVSWNKPSFVPECLSSHLEIFEWRQ 359
S+ W NLL +LNDAP LR L L L Q+ V + W KP+ VPECLS+ LEI +WR
Sbjct: 326 SAGWQNLLACMLNDAPNLRSLTLKLRQKSDVNPKKV--WEKPTVVPECLSTRLEILKWRD 383
Query: 358 YKGTETEREAAKYILANGSHLKKAAFYSESAEK-QGMLKELECVARDS--CTFVFE* 197
Y+GTE E++ YILAN + L++A F ++ + EL+ + R S C FVF+*
Sbjct: 384 YEGTEHEKDMVGYILANATFLQRATFSTKDRNQCDSRFSELQSMERVSEICEFVFD* 440
>TAIR9_protein||AT1G32375.1 | Symbols: | F-box family protein |
chr1:11679230-11680679 FORWARD
Length = 423
Score = 91 bits (224), Expect = 4e-019
Identities = 53/119 (44%), Positives = 71/119 (59%), Gaps = 8/119 (6%)
Frame = -2
Query: 535 SDWWNLLTLILNDAPRLRVLKLNLFQEHCVQ-HDGMVSWNKPSFVPECLSSHLEIFEWRQ 359
++W NLL +L D+P+LR LK L + H + H WN+PS VPECL + LE EW +
Sbjct: 307 TEWLNLLMCVLRDSPKLRELK--LVKNHVYRSHQPRPCWNEPSAVPECLLTSLETLEWVK 364
Query: 358 YKGTETEREAAKYILANGSHLKKAAFYSESAE---KQGMLKELECVARDS--CTFVFE* 197
Y+GTE E+E A +IL +GS LKK S+S + K MLKEL + R S C F+*
Sbjct: 365 YEGTEEEKEVAAFILRSGSCLKKVTISSKSTDINKKFEMLKELSLLFRRSPTCQIAFD* 423
>TAIR9_protein||AT5G38580.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: FBD
(InterPro:IPR013596), FBD-like (InterPro:IPR006566); BEST Arabidopsis
thaliana protein match is: F-box family protein (TAIR:AT5G38570.1); Has
225 Blast hits to 219 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 225; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr5:15451164-15451842 REVERSE
Length = 169
Score = 88 bits (217), Expect = 3e-018
Identities = 48/114 (42%), Positives = 69/114 (60%), Gaps = 7/114 (6%)
Frame = -2
Query: 523 NLLTLILNDAPRLRVLKLNLFQEHCV-QHDGMVSWNKPSFVPECLSSHLEIFEWRQYKGT 347
NLL +L D+P LR+L +++ ++H + +GMVSWN+P+FVPECL S L+ W +Y G
Sbjct: 50 NLLGQLLKDSPNLRILDISVVKDHGTDERNGMVSWNQPNFVPECLLSSLQTLLWSRYFGR 109
Query: 346 ETEREAAKYILANGSHLKKAAFYSESAEKQ----GMLKELECVARDS--CTFVF 203
+ +R+ A YIL N HLK A +++ E M+KEL R S C VF
Sbjct: 110 QQDRDIAVYILKNACHLKTATILADTDEHDVPNLQMIKELALSLRTSVICQLVF 163
>TAIR9_protein||AT5G56400.1 | Symbols: | F-box family protein |
chr5:22846069-22847615 REVERSE
Length = 456
Score = 86 bits (212), Expect = 1e-017
Identities = 44/83 (53%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Frame = -2
Query: 535 SDWWNLLTLILNDAPRLRVLKLNLFQEHCVQHDGMVSWN-KPSFVPECLSSHLEIFEWRQ 359
S W N+L ++L D+P+LRVLKLN V +WN +PS+VPECL+ LEIFEWR
Sbjct: 335 SKWLNILAMLLPDSPKLRVLKLNDKNHDFVDKYCSCTWNQQPSYVPECLTKSLEIFEWRN 394
Query: 358 YKGTETEREAAKYILANGSHLKK 290
YK T ER+ A YIL N + LKK
Sbjct: 395 YKATFRERDVAVYILKNSTCLKK 417
>TAIR9_protein||AT4G26340.1 | Symbols: | F-box family protein |
chr4:13324130-13325559 FORWARD
Length = 420
Score = 83 bits (204), Expect = 8e-017
Identities = 52/119 (43%), Positives = 68/119 (57%), Gaps = 9/119 (7%)
Frame = -2
Query: 529 WWNLLTLILNDAPRLRVLKLNLFQEHCVQHDGM---VSWNKPSFVPECLSSHLEIFEWRQ 359
WW+LLT +L D+P+L+ LKL + ++H G+ + W PS VPECL LE FEW
Sbjct: 303 WWDLLTSMLQDSPKLQSLKL-IDKQHESGLCGIETPIGWKLPSSVPECLLFSLEAFEWIG 361
Query: 358 YKGTETEREAAKYILANGSHLKKAAFYSES---AEKQGMLKELECV--ARDSCTFVFE* 197
YKG +RE A Y+L N + L+ A F ES EK MLKEL V A S +F+*
Sbjct: 362 YKGRRGDREVATYVLKNAACLRTAKFSPESTDVGEKYHMLKELASVPTASTSSKLLFD* 420
>TAIR9_protein||AT5G56452.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: FBD
(InterPro:IPR013596), FBD-like (InterPro:IPR006566); BEST Arabidopsis
thaliana protein match is: F-box family protein (TAIR:AT3G50710.1); Has
241 Blast hits to 234 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 241; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr5:22860483-22861336 REVERSE
Length = 228
Score = 83 bits (203), Expect = 1e-016
Identities = 39/86 (45%), Positives = 50/86 (58%)
Frame = -2
Query: 538 SSDWWNLLTLILNDAPRLRVLKLNLFQEHCVQHDGMVSWNKPSFVPECLSSHLEIFEWRQ 359
S WW LLT +L+++P+L+VLKL +E C W P VPECL HL FEW+
Sbjct: 109 SPGWWGLLTWMLDNSPKLQVLKLGKCKERCFISSIESHWRGPISVPECLRLHLSTFEWKY 168
Query: 358 YKGTETEREAAKYILANGSHLKKAAF 281
Y G + E++ YIL N LK AAF
Sbjct: 169 YNGRDEEKKIVAYILKNARQLKTAAF 194
>TAIR9_protein||AT5G56452.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: FBD
(InterPro:IPR013596), FBD-like (InterPro:IPR006566); BEST Arabidopsis
thaliana protein match is: F-box family protein (TAIR:AT3G50710.1); Has
238 Blast hits to 231 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 238; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr5:22860483-22861336 REVERSE
Length = 227
Score = 83 bits (203), Expect = 1e-016
Identities = 39/86 (45%), Positives = 50/86 (58%)
Frame = -2
Query: 538 SSDWWNLLTLILNDAPRLRVLKLNLFQEHCVQHDGMVSWNKPSFVPECLSSHLEIFEWRQ 359
S WW LLT +L+++P+L+VLKL +E C W P VPECL HL FEW+
Sbjct: 108 SPGWWGLLTWMLDNSPKLQVLKLGKCKERCFISSIESHWRGPISVPECLRLHLSTFEWKY 167
Query: 358 YKGTETEREAAKYILANGSHLKKAAF 281
Y G + E++ YIL N LK AAF
Sbjct: 168 YNGRDEEKKIVAYILKNARQLKTAAF 193
>TAIR9_protein||AT3G50710.1 | Symbols: | F-box family protein |
chr3:18845199-18846673 REVERSE
Length = 428
Score = 82 bits (201), Expect = 2e-016
Identities = 46/123 (37%), Positives = 67/123 (54%), Gaps = 14/123 (11%)
Frame = -2
Query: 529 WWNLLTLILNDAPRLRVLKLNLFQEHCVQHDGM-----VSWNKPSFVPECLSSHLEIFEW 365
WW+LLT +L +P+L+VLK +++ C +HD + W +PS VP+CL HL IFEW
Sbjct: 308 WWDLLTWMLQSSPKLQVLK--IYECKCEEHDYLDDPIEEHWEEPSSVPQCLLFHLNIFEW 365
Query: 364 RQYKGTETEREAAKYILANGSHLKKAAFYSES-----AEKQGMLKELECVAR--DSCTFV 206
+ Y + E++ YIL N LK A F + S E+ L EL +AR SC +
Sbjct: 366 KYYNAGDEEKKVVAYILKNARQLKTATFSAASYLYPKEERSRELNELVYMARASSSCQLL 425
Query: 205 FE* 197
+*
Sbjct: 426 LD* 428
>TAIR9_protein||AT5G38590.2 | Symbols: | F-box family protein |
chr5:15452066-15453455 REVERSE
Length = 411
Score = 82 bits (200), Expect = 2e-016
Identities = 43/103 (41%), Positives = 64/103 (62%), Gaps = 11/103 (10%)
Frame = -2
Query: 523 NLLTLILNDAPRLRVLKLNLFQEHC----VQHDGMVSWNKPSFVPECLSSHLEIFEWRQY 356
+LL +L D+P LR+L++++ ++H + DG WN+PS VPECL S L+IF+W QY
Sbjct: 302 SLLGQLLKDSPNLRILEISVMEDHVDDVGISLDG---WNQPSSVPECLLSSLQIFKWPQY 358
Query: 355 KGTETEREAAKYILANGSHLKKAAFYSESAEK----QGMLKEL 239
G +R+ A YIL N HLKK ++ E+ + M+KEL
Sbjct: 359 LGRPEDRDIAVYILKNARHLKKTTILADRCERFVTQRRMIKEL 401
>TAIR9_protein||AT3G53550.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: FBD
(InterPro:IPR013596), FBD-like (InterPro:IPR006566); BEST Arabidopsis
thaliana protein match is: unknown protein (TAIR:AT5G44850.1); Has 264
Blast hits to 243 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 264; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr3:19856870-19858308 FORWARD
Length = 257
Score = 76 bits (186), Expect = 1e-014
Identities = 34/71 (47%), Positives = 49/71 (69%)
Frame = -2
Query: 430 VSWNKPSFVPECLSSHLEIFEWRQYKGTETEREAAKYILANGSHLKKAAFYSESAEKQGM 251
+SWN+PS VPECLS+HL+IFEW+ Y+G + E+E +YILAN L++ +S
Sbjct: 163 LSWNQPSSVPECLSNHLKIFEWKGYRGRKEEKEIVRYILANSKCLRRIGVSLKSTNNHKT 222
Query: 250 LKELECVARDS 218
+KELE ++R S
Sbjct: 223 IKELESMSRVS 233
>TAIR9_protein||AT5G56325.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: FBD
(InterPro:IPR013596), FBD-like (InterPro:IPR006566); BEST Arabidopsis
thaliana protein match is: F-box family protein (TAIR:AT5G56390.1); Has
375 Blast hits to 366 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 375; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr5:22812213-22813193 FORWARD
Length = 265
Score = 71 bits (173), Expect = 3e-013
Identities = 41/104 (39%), Positives = 61/104 (58%), Gaps = 7/104 (6%)
Frame = -2
Query: 535 SDWWNLLTLILNDAPRLRVLKLNLFQEHCVQ-HDGMVSWNKPSFVPECLSSHLEIFEWRQ 359
++W NLL +L ++P LRVL++ Q H ++ + W++PS +PECL+ +LE F+W
Sbjct: 148 TEWINLLMRLLRNSPSLRVLEIE--QVHYLRYYQPRPCWSEPSSIPECLTHNLETFKWEH 205
Query: 358 YKGTETEREAAKYILANGSHLKKAAFYSESA----EKQGMLKEL 239
Y G E E+E A +IL + LKKA + EK M KEL
Sbjct: 206 YYGAEEEKEVAAFILRSSICLKKATIILHRSIVHDEKLEMNKEL 249
>TAIR9_protein||AT5G56380.1 | Symbols: | F-box family protein |
chr5:22838836-22840353 REVERSE
Length = 440
Score = 71 bits (172), Expect = 4e-013
Identities = 45/120 (37%), Positives = 64/120 (53%), Gaps = 10/120 (8%)
Frame = -2
Query: 535 SDWWNLLTLILNDAPRLRVLKLNLFQEHCVQHDGMVSWNKPSFVPECLSSHLEIFEWRQY 356
S+W +L +L D+P L+ +K+N Q H V + WN+P VP CLSS LE EW +Y
Sbjct: 324 SEWLDLFIHLLEDSPSLQDIKIN--QCHPVTNP-RPQWNQPGSVPRCLSSSLETLEWVEY 380
Query: 355 KGTETEREAAKYILANGSHLKKAAFYS-----ESAEKQGMLKELECVARDS--CTFVFE* 197
GT E+E + Y+ KKA+F + ++ +K ML+EL R S C VF *
Sbjct: 381 GGTHEEKELSTYLFKTAVCFKKASFTAKWSGGDANKKLQMLQELALSPRVSPTCELVFN* 440
>TAIR9_protein||AT4G10400.1 | Symbols: | F-box family protein |
chr4:6446335-6447715 REVERSE
Length = 410
Score = 69 bits (166), Expect = 2e-012
Identities = 41/106 (38%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Frame = -2
Query: 523 NLLTLILNDAPRLRVLKLNLFQEHCVQHDGMVSWNKPSFVPECLSSHLEIFEWRQYKGTE 344
NLL L ++P LR L L + + ++ GM+SWN+PS VPEC+ S L+ F W +Y G
Sbjct: 299 NLLVWFLKNSPNLRELML-VSETDDHENLGMLSWNQPSIVPECMLSSLQKFTWFKYLGRP 357
Query: 343 TEREAAKYILANGSHLKKAAFYSESA--EKQGMLKELECVARDSCT 212
+R+ A YIL N L+ A S++ K M+ EL ++ S T
Sbjct: 358 QDRDIAVYILKNACRLRTATIKSDTRLFTKLEMITELRLSSQASST 403
>TAIR9_protein||AT4G10420.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 11 plant structures;
EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: FBD
(InterPro:IPR013596), FBD-like (InterPro:IPR006566), Leucine-rich
repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match
is: F-box family protein (TAIR:AT4G10400.2); Has 664 Blast hits to 644
proteins in 11 species: Archae - 0; Bacteria - 8; Metazoa - 17; Fungi -
0; Plants - 639; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink). | chr4:6453085-6454209 REVERSE
Length = 323
Score = 69 bits (166), Expect = 2e-012
Identities = 41/106 (38%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Frame = -2
Query: 523 NLLTLILNDAPRLRVLKLNLFQEHCVQHDGMVSWNKPSFVPECLSSHLEIFEWRQYKGTE 344
NLL+ L D+P L+ L+ + ++ M WN+PS VPECL S L+ F W QY G
Sbjct: 211 NLLSQFLKDSPNLQELEYFSELDDSYENMRMFPWNQPSIVPECLLSSLQKFTWSQYLGRT 270
Query: 343 TEREAAKYILANGSHLKKAAF--YSESAEKQGMLKELECVARDSCT 212
+R+ A YIL N L+ A Y+ + M+KEL +R S T
Sbjct: 271 QDRDIAVYILKNACCLRNATIDSYTCLVPELKMIKELTRSSRASTT 316
>TAIR9_protein||AT4G10400.2 | Symbols: | F-box family protein |
chr4:6446335-6447715 REVERSE
Length = 410
Score = 69 bits (166), Expect = 2e-012
Identities = 41/106 (38%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Frame = -2
Query: 523 NLLTLILNDAPRLRVLKLNLFQEHCVQHDGMVSWNKPSFVPECLSSHLEIFEWRQYKGTE 344
NLL L ++P LR L L + + ++ GM+SWN+PS VPEC+ S L+ F W +Y G
Sbjct: 299 NLLVWFLKNSPNLRELML-VSETDDHENLGMLSWNQPSIVPECMLSSLQKFTWFKYLGRP 357
Query: 343 TEREAAKYILANGSHLKKAAFYSESA--EKQGMLKELECVARDSCT 212
+R+ A YIL N L+ A S++ K M+ EL ++ S T
Sbjct: 358 QDRDIAVYILKNACRLRTATIKSDTRLFTKLEMITELRLSSQASST 403
>TAIR9_protein||AT3G49480.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: FBD
(InterPro:IPR013596), FBD-like (InterPro:IPR006566), Leucine-rich
repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match
is: F-box family protein (TAIR:AT1G05080.1); Has 443 Blast hits to 431
proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 441; Viruses - 0; Other Eukaryotes - 2 (source: NCBI
BLink). | chr3:18342544-18343473 REVERSE
Length = 310
Score = 68 bits (164), Expect = 4e-012
Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Frame = -2
Query: 424 WNKPSFVPECLSSHLEIFEWRQYKGTETEREAAKYILANGSHLKKAAFYSE---SAEKQG 254
WN+PS +P CLSSHLEIFEW Y G E E++ +YIL N +LK A S E++
Sbjct: 224 WNQPSSIPRCLSSHLEIFEWDGYVGREDEKKIIRYILENSKYLKTAGISPNSTFSGEEKQ 283
Query: 253 MLKELECVAR 224
++ELE + R
Sbjct: 284 KMEELESMHR 293
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,660,072,892
Number of Sequences: 33410
Number of Extensions: 1660072892
Number of Successful Extensions: 58629110
Number of sequences better than 0.0: 0
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