BLASTX 7.6.2
Query= UN01991 /QuerySize=1411
(1410 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G32720.1 | Symbols: AtLa1 | AtLa1 (Arabidopsis... 656 1e-188
TAIR9_protein||AT4G32720.2 | Symbols: AtLa1 | AtLa1 (Arabidopsis... 596 2e-170
TAIR9_protein||AT1G79880.1 | Symbols: | La domain-containing pr... 154 2e-037
TAIR9_protein||AT1G79880.2 | Symbols: | La domain-containing pr... 148 1e-035
TAIR9_protein||AT1G79880.3 | Symbols: | La domain-containing pr... 148 1e-035
>TAIR9_protein||AT4G32720.1 | Symbols: AtLa1 | AtLa1 (Arabidopsis thaliana La
protein 1); RNA binding | chr4:15787313-15789683 FORWARD
Length = 434
Score = 656 bits (1692), Expect = 1e-188
Identities = 335/386 (86%), Positives = 353/386 (91%), Gaps = 4/386 (1%)
Frame = -3
Query: 1291 SFSKMRAYLKLGDSKGDEVPEDTIKAVADTLRTSKALKVSEDGKKVGRSTELLKLEDLIE 1112
SFSKMR YLKLGDSKGD++PEDTIKAVADTLRTS ALK+S+DGKKVGRSTELLKLEDLIE
Sbjct: 52 SFSKMRGYLKLGDSKGDDIPEDTIKAVADTLRTSSALKISDDGKKVGRSTELLKLEDLIE 111
Query: 1111 QLNARTVAVSPFSYDVKREDVEAFFSQYGKVNSVRMPRHVAETRVFSGVALVEFPTEEEA 932
QLNARTVA SPFSYDVKREDVE+FFSQYGKVNSVRMPRHVAE+R+FSGVALVEFPTEE+A
Sbjct: 112 QLNARTVAASPFSYDVKREDVESFFSQYGKVNSVRMPRHVAESRIFSGVALVEFPTEEDA 171
Query: 931 QNVMKQNLVFAGLELEMKTKKEFDDEREKDEEKFANYRPQKASANQKNGSDHRNGSESEA 752
QNVMKQNLVFAG ELE+K KKEFD+EREKDE KFANY+PQK SANQKNGSDH+N S E
Sbjct: 172 QNVMKQNLVFAGQELELKPKKEFDNEREKDEVKFANYQPQKGSANQKNGSDHKNNSAYEP 231
Query: 751 NYPKGLIISFTLKRSTEEGAKE-KSSEEAADKKMEESESKPEDNPAADKENTDKSQGQGT 575
+YPKGLIISFTLKRS EEG E KSSEE DK MEESE+KP D P ADKENT + Q +G
Sbjct: 232 DYPKGLIISFTLKRSAEEGTTEQKSSEEPTDKTMEESETKPADTPDADKENTGEVQAEGA 291
Query: 574 EGEDDDGEKEEKGGALATHKDNKDVVLREDLKAVFGKFGDVKFVDFKMGSETGYLRFDEP 395
E EDD EKEEK GALATHKDNKDVVLREDLKAVFGKFGDVKFVDFKMGSETGYLRFDEP
Sbjct: 292 EDEDD--EKEEK-GALATHKDNKDVVLREDLKAVFGKFGDVKFVDFKMGSETGYLRFDEP 348
Query: 394 EASQKARAAAVLAKEGGLAVKNFIAVLEPLTGEAEKEYWGLLRSKDRFDKGGRGGRGGKR 215
EASQKARAAAVLA EGGLAVKNFIAVLEP+ GEAEKEYW LLRSKDRFDKGGRGGRGG+R
Sbjct: 349 EASQKARAAAVLANEGGLAVKNFIAVLEPVIGEAEKEYWTLLRSKDRFDKGGRGGRGGRR 408
Query: 214 GGRFGRKRGSDSPGGRWNKSQKVEA* 137
GGRFGRKRGSDSPGGRWNKSQKVEA*
Sbjct: 409 GGRFGRKRGSDSPGGRWNKSQKVEA* 434
>TAIR9_protein||AT4G32720.2 | Symbols: AtLa1 | AtLa1 (Arabidopsis thaliana La
protein 1); RNA binding | chr4:15787313-15789498 FORWARD
Length = 405
Score = 596 bits (1535), Expect = 2e-170
Identities = 307/356 (86%), Positives = 324/356 (91%), Gaps = 4/356 (1%)
Frame = -3
Query: 1291 SFSKMRAYLKLGDSKGDEVPEDTIKAVADTLRTSKALKVSEDGKKVGRSTELLKLEDLIE 1112
SFSKMR YLKLGDSKGD++PEDTIKAVADTLRTS ALK+S+DGKKVGRSTELLKLEDLIE
Sbjct: 52 SFSKMRGYLKLGDSKGDDIPEDTIKAVADTLRTSSALKISDDGKKVGRSTELLKLEDLIE 111
Query: 1111 QLNARTVAVSPFSYDVKREDVEAFFSQYGKVNSVRMPRHVAETRVFSGVALVEFPTEEEA 932
QLNARTVA SPFSYDVKREDVE+FFSQYGKVNSVRMPRHVAE+R+FSGVALVEFPTEE+A
Sbjct: 112 QLNARTVAASPFSYDVKREDVESFFSQYGKVNSVRMPRHVAESRIFSGVALVEFPTEEDA 171
Query: 931 QNVMKQNLVFAGLELEMKTKKEFDDEREKDEEKFANYRPQKASANQKNGSDHRNGSESEA 752
QNVMKQNLVFAG ELE+K KKEFD+EREKDE KFANY+PQK SANQKNGSDH+N S E
Sbjct: 172 QNVMKQNLVFAGQELELKPKKEFDNEREKDEVKFANYQPQKGSANQKNGSDHKNNSAYEP 231
Query: 751 NYPKGLIISFTLKRSTEEGAKE-KSSEEAADKKMEESESKPEDNPAADKENTDKSQGQGT 575
+YPKGLIISFTLKRS EEG E KSSEE DK MEESE+KP D P ADKENT + Q +G
Sbjct: 232 DYPKGLIISFTLKRSAEEGTTEQKSSEEPTDKTMEESETKPADTPDADKENTGEVQAEGA 291
Query: 574 EGEDDDGEKEEKGGALATHKDNKDVVLREDLKAVFGKFGDVKFVDFKMGSETGYLRFDEP 395
E EDD EKEEK GALATHKDNKDVVLREDLKAVFGKFGDVKFVDFKMGSETGYLRFDEP
Sbjct: 292 EDEDD--EKEEK-GALATHKDNKDVVLREDLKAVFGKFGDVKFVDFKMGSETGYLRFDEP 348
Query: 394 EASQKARAAAVLAKEGGLAVKNFIAVLEPLTGEAEKEYWGLLRSKDRFDKGGRGGR 227
EASQKARAAAVLA EGGLAVKNFIAVLEP+ GEAEKEYW LLRSKDRFDKGGRGGR
Sbjct: 349 EASQKARAAAVLANEGGLAVKNFIAVLEPVIGEAEKEYWTLLRSKDRFDKGGRGGR 404
>TAIR9_protein||AT1G79880.1 | Symbols: | La domain-containing protein |
chr1:30046222-30048336 REVERSE
Length = 400
Score = 154 bits (388), Expect = 2e-037
Identities = 73/148 (49%), Positives = 111/148 (75%)
Frame = -3
Query: 1291 SFSKMRAYLKLGDSKGDEVPEDTIKAVADTLRTSKALKVSEDGKKVGRSTELLKLEDLIE 1112
SFS+MR L LG+ +++P ++ VA+ LRTS LKVS +G+++GR T+L K E+++E
Sbjct: 51 SFSRMRNLLGLGNINREDIPPRIVEEVANLLRTSDFLKVSNNGQRIGRGTKLSKPEEVLE 110
Query: 1111 QLNARTVAVSPFSYDVKREDVEAFFSQYGKVNSVRMPRHVAETRVFSGVALVEFPTEEEA 932
Q++ RT+A SPF Y +K EDV +FFSQY KVNSVR+P ++A+ R F G ALVEF +E++
Sbjct: 111 QVHRRTLAASPFEYSIKMEDVSSFFSQYAKVNSVRLPPNIADKRRFCGTALVEFSSEQDT 170
Query: 931 QNVMKQNLVFAGLELEMKTKKEFDDERE 848
Q++++Q+LV+AG +L + K +FD +RE
Sbjct: 171 QDILRQSLVYAGADLVLIPKSDFDCQRE 198
Score = 85 bits (209), Expect = 9e-017
Identities = 61/187 (32%), Positives = 91/187 (48%), Gaps = 14/187 (7%)
Frame = -3
Query: 766 SESEANYPKGLIISFTLK-RSTEEGAKEKSSEEAADKKMEESESKPEDNPAADKENTDKS 590
SES + +G I+ F LK ++EE K A K++E E K +KEN D S
Sbjct: 207 SESHNEFRRGQIVKFALKWIASEEKVTNKEKPSALKNKIKEKEDKETGIADREKENGDNS 266
Query: 589 QGQGTEGEDDDGEKEEKGGALATHKDNKDVVLREDLKAVFGKFGDVKFVDFKMGSETGYL 410
+ D + +N + V E LK +F +FG V+ +++ G ++GY+
Sbjct: 267 CASLCKDNTDQ--------LVVPPWNNSNSVSSEVLKDLFQRFGSVEHIEYSGGLDSGYV 318
Query: 409 RFDEPEASQKARAAAVLAKEGGLAVK-NFIAVLEPLTGEAEKEYWGLLRSKDRFDKGGRG 233
F + E + KARAA GGL VK NF LE + GE E+E W L S + +GG+
Sbjct: 319 WFTDSETAMKARAAVEFV--GGLVVKNNFSVALEAINGEMERELWKRLSSAEL--EGGKE 374
Query: 232 GRGGKRG 212
G ++G
Sbjct: 375 GHKKEKG 381
>TAIR9_protein||AT1G79880.2 | Symbols: | La domain-containing protein |
chr1:30046222-30048014 REVERSE
Length = 346
Score = 148 bits (372), Expect = 1e-035
Identities = 70/144 (48%), Positives = 107/144 (74%)
Frame = -3
Query: 1279 MRAYLKLGDSKGDEVPEDTIKAVADTLRTSKALKVSEDGKKVGRSTELLKLEDLIEQLNA 1100
MR L LG+ +++P ++ VA+ LRTS LKVS +G+++GR T+L K E+++EQ++
Sbjct: 1 MRNLLGLGNINREDIPPRIVEEVANLLRTSDFLKVSNNGQRIGRGTKLSKPEEVLEQVHR 60
Query: 1099 RTVAVSPFSYDVKREDVEAFFSQYGKVNSVRMPRHVAETRVFSGVALVEFPTEEEAQNVM 920
RT+A SPF Y +K EDV +FFSQY KVNSVR+P ++A+ R F G ALVEF +E++ Q+++
Sbjct: 61 RTLAASPFEYSIKMEDVSSFFSQYAKVNSVRLPPNIADKRRFCGTALVEFSSEQDTQDIL 120
Query: 919 KQNLVFAGLELEMKTKKEFDDERE 848
+Q+LV+AG +L + K +FD +RE
Sbjct: 121 RQSLVYAGADLVLIPKSDFDCQRE 144
Score = 85 bits (209), Expect = 9e-017
Identities = 61/187 (32%), Positives = 91/187 (48%), Gaps = 14/187 (7%)
Frame = -3
Query: 766 SESEANYPKGLIISFTLK-RSTEEGAKEKSSEEAADKKMEESESKPEDNPAADKENTDKS 590
SES + +G I+ F LK ++EE K A K++E E K +KEN D S
Sbjct: 153 SESHNEFRRGQIVKFALKWIASEEKVTNKEKPSALKNKIKEKEDKETGIADREKENGDNS 212
Query: 589 QGQGTEGEDDDGEKEEKGGALATHKDNKDVVLREDLKAVFGKFGDVKFVDFKMGSETGYL 410
+ D + +N + V E LK +F +FG V+ +++ G ++GY+
Sbjct: 213 CASLCKDNTDQ--------LVVPPWNNSNSVSSEVLKDLFQRFGSVEHIEYSGGLDSGYV 264
Query: 409 RFDEPEASQKARAAAVLAKEGGLAVK-NFIAVLEPLTGEAEKEYWGLLRSKDRFDKGGRG 233
F + E + KARAA GGL VK NF LE + GE E+E W L S + +GG+
Sbjct: 265 WFTDSETAMKARAAVEFV--GGLVVKNNFSVALEAINGEMERELWKRLSSAEL--EGGKE 320
Query: 232 GRGGKRG 212
G ++G
Sbjct: 321 GHKKEKG 327
>TAIR9_protein||AT1G79880.3 | Symbols: | La domain-containing protein |
chr1:30046222-30048014 REVERSE
Length = 358
Score = 148 bits (372), Expect = 1e-035
Identities = 70/144 (48%), Positives = 107/144 (74%)
Frame = -3
Query: 1279 MRAYLKLGDSKGDEVPEDTIKAVADTLRTSKALKVSEDGKKVGRSTELLKLEDLIEQLNA 1100
MR L LG+ +++P ++ VA+ LRTS LKVS +G+++GR T+L K E+++EQ++
Sbjct: 1 MRNLLGLGNINREDIPPRIVEEVANLLRTSDFLKVSNNGQRIGRGTKLSKPEEVLEQVHR 60
Query: 1099 RTVAVSPFSYDVKREDVEAFFSQYGKVNSVRMPRHVAETRVFSGVALVEFPTEEEAQNVM 920
RT+A SPF Y +K EDV +FFSQY KVNSVR+P ++A+ R F G ALVEF +E++ Q+++
Sbjct: 61 RTLAASPFEYSIKMEDVSSFFSQYAKVNSVRLPPNIADKRRFCGTALVEFSSEQDTQDIL 120
Query: 919 KQNLVFAGLELEMKTKKEFDDERE 848
+Q+LV+AG +L + K +FD +RE
Sbjct: 121 RQSLVYAGADLVLIPKSDFDCQRE 144
Score = 82 bits (200), Expect = 1e-015
Identities = 57/172 (33%), Positives = 83/172 (48%), Gaps = 12/172 (6%)
Frame = -3
Query: 766 SESEANYPKGLIISFTLK-RSTEEGAKEKSSEEAADKKMEESESKPEDNPAADKENTDKS 590
SES + +G I+ F LK ++EE K A K++E E K +KEN D S
Sbjct: 153 SESHNEFRRGQIVKFALKWIASEEKVTNKEKPSALKNKIKEKEDKETGIADREKENGDNS 212
Query: 589 QGQGTEGEDDDGEKEEKGGALATHKDNKDVVLREDLKAVFGKFGDVKFVDFKMGSETGYL 410
+ D + +N + V E LK +F +FG V+ +++ G ++GY+
Sbjct: 213 CASLCKDNTDQ--------LVVPPWNNSNSVSSEVLKDLFQRFGSVEHIEYSGGLDSGYV 264
Query: 409 RFDEPEASQKARAAAVLAKEGGLAVK-NFIAVLEPLTGEAEKEYWGLLRSKD 257
F + E + KARAA GGL VK NF LE + GE E+E W L S +
Sbjct: 265 WFTDSETAMKARAAVEFV--GGLVVKNNFSVALEAINGEMERELWKRLSSAE 314
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,753,232,531
Number of Sequences: 33410
Number of Extensions: 1753232531
Number of Successful Extensions: 63851035
Number of sequences better than 0.0: 0
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