BLASTX 7.6.2
Query= UN02280 /QuerySize=1186
(1185 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G46210.1 | Symbols: | 3' exoribonuclease fami... 434 8e-122
TAIR9_protein||AT3G46210.2 | Symbols: | 3' exoribonuclease fami... 434 8e-122
TAIR9_protein||AT3G46210.3 | Symbols: | 3' exoribonuclease fami... 434 8e-122
TAIR9_protein||AT3G46210.4 | Symbols: | 3' exoribonuclease fami... 434 8e-122
TAIR9_protein||AT3G46210.5 | Symbols: | 3' exoribonuclease fami... 434 8e-122
TAIR9_protein||AT3G46200.1 | Symbols: aTNUDT9 | aTNUDT9 (Arabido... 122 7e-028
TAIR9_protein||AT2G07110.1 | Symbols: | FUNCTIONS IN: molecular... 68 9e-012
TAIR9_protein||AT4G27490.1 | Symbols: | 3' exoribonuclease fami... 67 3e-011
TAIR9_protein||AT3G61620.1 | Symbols: RRP41 | RRP41; 3'-5'-exori... 51 1e-006
TAIR9_protein||AT3G61620.2 | Symbols: RRP41 | RRP41; 3'-5'-exori... 51 1e-006
>TAIR9_protein||AT3G46210.1 | Symbols: | 3' exoribonuclease family domain
1-containing protein | chr3:16976960-16978489 REVERSE
Length = 240
Score = 434 bits (1114), Expect = 8e-122
Identities = 215/234 (91%), Positives = 222/234 (94%), Gaps = 5/234 (2%)
Frame = +1
Query: 73 MEIDREDGRRPNQLRPLACSRNILHRPHGSASWSQGDTKVL-VVYGPKPVTRKNENPEKA 249
MEIDREDGR PNQLRPLACSRNILHRPHGSASWSQGDTKVL VYGPK T+KNEN EKA
Sbjct: 1 MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60
Query: 250 CFEVIWKPKSGQIGKAEKEYEMILKKTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 429
CFEVIWKPKSGQIGK EKEYEMILK+TIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI
Sbjct: 61 CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120
Query: 430 NAACAALVDAGIPMKHLAVAICCCLADSGYVVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 609
NAACAALVDAGIPMKHLAVAICCCLA++GY+VLDPNKLEEKKMTAFAYLVFPNTTLSVLP
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180
Query: 610 E----VEGEPVEHGIITSVTHGVMSVDDYFLCVENGRAATASLSAFFRKNFQQT 759
E EGEPVEHGIITS+THGVMSVDDYFLCVENGRAATASLSAFFRKNFQQ+
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMSVDDYFLCVENGRAATASLSAFFRKNFQQS 234
>TAIR9_protein||AT3G46210.2 | Symbols: | 3' exoribonuclease family domain
1-containing protein | chr3:16976960-16978489 REVERSE
Length = 240
Score = 434 bits (1114), Expect = 8e-122
Identities = 215/234 (91%), Positives = 222/234 (94%), Gaps = 5/234 (2%)
Frame = +1
Query: 73 MEIDREDGRRPNQLRPLACSRNILHRPHGSASWSQGDTKVL-VVYGPKPVTRKNENPEKA 249
MEIDREDGR PNQLRPLACSRNILHRPHGSASWSQGDTKVL VYGPK T+KNEN EKA
Sbjct: 1 MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60
Query: 250 CFEVIWKPKSGQIGKAEKEYEMILKKTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 429
CFEVIWKPKSGQIGK EKEYEMILK+TIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI
Sbjct: 61 CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120
Query: 430 NAACAALVDAGIPMKHLAVAICCCLADSGYVVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 609
NAACAALVDAGIPMKHLAVAICCCLA++GY+VLDPNKLEEKKMTAFAYLVFPNTTLSVLP
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180
Query: 610 E----VEGEPVEHGIITSVTHGVMSVDDYFLCVENGRAATASLSAFFRKNFQQT 759
E EGEPVEHGIITS+THGVMSVDDYFLCVENGRAATASLSAFFRKNFQQ+
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMSVDDYFLCVENGRAATASLSAFFRKNFQQS 234
>TAIR9_protein||AT3G46210.3 | Symbols: | 3' exoribonuclease family domain
1-containing protein | chr3:16976960-16978489 REVERSE
Length = 240
Score = 434 bits (1114), Expect = 8e-122
Identities = 215/234 (91%), Positives = 222/234 (94%), Gaps = 5/234 (2%)
Frame = +1
Query: 73 MEIDREDGRRPNQLRPLACSRNILHRPHGSASWSQGDTKVL-VVYGPKPVTRKNENPEKA 249
MEIDREDGR PNQLRPLACSRNILHRPHGSASWSQGDTKVL VYGPK T+KNEN EKA
Sbjct: 1 MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60
Query: 250 CFEVIWKPKSGQIGKAEKEYEMILKKTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 429
CFEVIWKPKSGQIGK EKEYEMILK+TIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI
Sbjct: 61 CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120
Query: 430 NAACAALVDAGIPMKHLAVAICCCLADSGYVVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 609
NAACAALVDAGIPMKHLAVAICCCLA++GY+VLDPNKLEEKKMTAFAYLVFPNTTLSVLP
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180
Query: 610 E----VEGEPVEHGIITSVTHGVMSVDDYFLCVENGRAATASLSAFFRKNFQQT 759
E EGEPVEHGIITS+THGVMSVDDYFLCVENGRAATASLSAFFRKNFQQ+
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMSVDDYFLCVENGRAATASLSAFFRKNFQQS 234
>TAIR9_protein||AT3G46210.4 | Symbols: | 3' exoribonuclease family domain
1-containing protein | chr3:16976960-16978489 REVERSE
Length = 240
Score = 434 bits (1114), Expect = 8e-122
Identities = 215/234 (91%), Positives = 222/234 (94%), Gaps = 5/234 (2%)
Frame = +1
Query: 73 MEIDREDGRRPNQLRPLACSRNILHRPHGSASWSQGDTKVL-VVYGPKPVTRKNENPEKA 249
MEIDREDGR PNQLRPLACSRNILHRPHGSASWSQGDTKVL VYGPK T+KNEN EKA
Sbjct: 1 MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60
Query: 250 CFEVIWKPKSGQIGKAEKEYEMILKKTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 429
CFEVIWKPKSGQIGK EKEYEMILK+TIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI
Sbjct: 61 CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120
Query: 430 NAACAALVDAGIPMKHLAVAICCCLADSGYVVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 609
NAACAALVDAGIPMKHLAVAICCCLA++GY+VLDPNKLEEKKMTAFAYLVFPNTTLSVLP
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180
Query: 610 E----VEGEPVEHGIITSVTHGVMSVDDYFLCVENGRAATASLSAFFRKNFQQT 759
E EGEPVEHGIITS+THGVMSVDDYFLCVENGRAATASLSAFFRKNFQQ+
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMSVDDYFLCVENGRAATASLSAFFRKNFQQS 234
>TAIR9_protein||AT3G46210.5 | Symbols: | 3' exoribonuclease family domain
1-containing protein | chr3:16976960-16978489 REVERSE
Length = 240
Score = 434 bits (1114), Expect = 8e-122
Identities = 215/234 (91%), Positives = 222/234 (94%), Gaps = 5/234 (2%)
Frame = +1
Query: 73 MEIDREDGRRPNQLRPLACSRNILHRPHGSASWSQGDTKVL-VVYGPKPVTRKNENPEKA 249
MEIDREDGR PNQLRPLACSRNILHRPHGSASWSQGDTKVL VYGPK T+KNEN EKA
Sbjct: 1 MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60
Query: 250 CFEVIWKPKSGQIGKAEKEYEMILKKTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 429
CFEVIWKPKSGQIGK EKEYEMILK+TIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI
Sbjct: 61 CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120
Query: 430 NAACAALVDAGIPMKHLAVAICCCLADSGYVVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 609
NAACAALVDAGIPMKHLAVAICCCLA++GY+VLDPNKLEEKKMTAFAYLVFPNTTLSVLP
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180
Query: 610 E----VEGEPVEHGIITSVTHGVMSVDDYFLCVENGRAATASLSAFFRKNFQQT 759
E EGEPVEHGIITS+THGVMSVDDYFLCVENGRAATASLSAFFRKNFQQ+
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMSVDDYFLCVENGRAATASLSAFFRKNFQQS 234
>TAIR9_protein||AT3G46200.1 | Symbols: aTNUDT9 | aTNUDT9 (Arabidopsis thaliana
Nudix hydrolase homolog 9); hydrolase | chr3:16969283-16971017 FORWARD
Length = 312
Score = 122 bits (304), Expect = 7e-028
Identities = 55/68 (80%), Positives = 62/68 (91%)
Frame = -1
Query: 1185 FFFIKCSHHSDDIPKLYSSAEDGFGSTQLHTVSLEELKTMVSRMPGCHHGGFALYQLMLQ 1006
FF++KCSHHSDDI +LYSSAEDGF STQLHTVSL+ELK M SRMPGCHHGGFALY+LMLQ
Sbjct: 239 FFYLKCSHHSDDIQRLYSSAEDGFESTQLHTVSLDELKMMTSRMPGCHHGGFALYELMLQ 298
Query: 1005 RLQSTNAT 982
RL++T T
Sbjct: 299 RLKNTKET 306
>TAIR9_protein||AT2G07110.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana protein match is:
3' exoribonuclease family domain 1-containing protein
(TAIR:AT3G46210.5); Has 24 Blast hits to 24 proteins in 7 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr2:2952610-2953208
REVERSE
Length = 151
Score = 68 bits (165), Expect = 9e-012
Identities = 33/44 (75%), Positives = 38/44 (86%)
Frame = +1
Query: 283 QIGKAEKEYEMILKKTIQSICVLTVNPNTTTSVIIQVVHDDGSL 414
++ K EKEYE ILK+T+QSICVL V PNTTTSVIIQVVHD GS+
Sbjct: 76 RLRKVEKEYETILKRTLQSICVLRVVPNTTTSVIIQVVHDGGSV 119
>TAIR9_protein||AT4G27490.1 | Symbols: | 3' exoribonuclease family domain
1-containing protein | chr4:13739961-13741647 FORWARD
Length = 257
Score = 67 bits (161), Expect = 3e-011
Identities = 57/170 (33%), Positives = 78/170 (45%), Gaps = 17/170 (10%)
Frame = +1
Query: 73 MEIDREDGRRPNQLRPLACSRNILHRPHGSASWSQGDTKVLV-VYGPK---------PVT 222
++ R DGR +Q RP + GSA G+TKV+V V+GP+ V
Sbjct: 30 LDWSRPDGRGFHQCRPALLQTGAVSSASGSAYAEFGNTKVIVSVFGPRESKKAMVYSDVG 89
Query: 223 RKNENPEKACFEVIWKPKSGQIGKAEKEYEMILKKTIQSICVLTVNPNTTTSVIIQVVHD 402
R N N F P GQ G KEY +L K ++ + ++ P TT V V+
Sbjct: 90 RLNCNVSYTNFA---SPTLGQ-GTDHKEYSSMLHKALEGVIMMETFPKTTVDVFALVLES 145
Query: 403 DGSLLPCAINAACAALVDAGIPMKHLAVAI-CCCLADSGYVVLDPNKLEE 549
GS L I+ A AL DAGI M L A+ C+ S +++DP EE
Sbjct: 146 GGSDLSVLISCASLALADAGIMMYDLITAVSVSCIGKS--LMIDPVTEEE 193
>TAIR9_protein||AT3G61620.1 | Symbols: RRP41 | RRP41; 3'-5'-exoribonuclease/ RNA
binding | chr3:22801382-22802910 REVERSE
Length = 242
Score = 51 bits (121), Expect = 1e-006
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 9/86 (10%)
Frame = +1
Query: 304 EYEMILKKTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAINAACAALVDAGIPMKHLA 483
E +++++T+++ + + P++ + +QV+ DG INAA AL DAGIPM+ LA
Sbjct: 94 ELSLVIRQTMEACILTELMPHSQIDIFLQVLQADGGTRSACINAATLALADAGIPMRDLA 153
Query: 484 VAICCCLADSGYV----VLDPNKLEE 549
V+ +GY+ +LD N +E+
Sbjct: 154 VS-----CSAGYLNSTPLLDLNYVED 174
>TAIR9_protein||AT3G61620.2 | Symbols: RRP41 | RRP41; 3'-5'-exoribonuclease/ RNA
binding | chr3:22801382-22802910 REVERSE
Length = 242
Score = 51 bits (121), Expect = 1e-006
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 9/86 (10%)
Frame = +1
Query: 304 EYEMILKKTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAINAACAALVDAGIPMKHLA 483
E +++++T+++ + + P++ + +QV+ DG INAA AL DAGIPM+ LA
Sbjct: 94 ELSLVIRQTMEACILTELMPHSQIDIFLQVLQADGGTRSACINAATLALADAGIPMRDLA 153
Query: 484 VAICCCLADSGYV----VLDPNKLEE 549
V+ +GY+ +LD N +E+
Sbjct: 154 VS-----CSAGYLNSTPLLDLNYVED 174
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,890,859,826
Number of Sequences: 33410
Number of Extensions: 1890859826
Number of Successful Extensions: 69327208
Number of sequences better than 0.0: 0
|
