BLASTX 7.6.2
Query= UN02356 /QuerySize=723
(722 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G32060.1 | Symbols: | 40S ribosomal protein S... 263 7e-071
TAIR9_protein||AT2G32060.3 | Symbols: | 40S ribosomal protein S... 263 7e-071
TAIR9_protein||AT2G32060.2 | Symbols: | 40S ribosomal protein S... 263 7e-071
TAIR9_protein||AT1G15930.2 | Symbols: | 40S ribosomal protein S... 242 3e-064
TAIR9_protein||AT1G15930.1 | Symbols: | 40S ribosomal protein S... 242 3e-064
>TAIR9_protein||AT2G32060.1 | Symbols: | 40S ribosomal protein S12 (RPS12C) |
chr2:13639228-13640104 REVERSE
Length = 145
Score = 263 bits (672), Expect = 7e-071
Identities = 131/146 (89%), Positives = 140/146 (95%), Gaps = 1/146 (0%)
Frame = +3
Query: 93 MSGDEAAAAPTVVPPVAEAAVIPEDMDLLTALELTLRKARAHGGVVRGLHESAKLIEKRS 272
MSGDEA AAP VVPPVAEAAVIPEDMD+ TALELT+RK+RA+GGVVRGLHESAKLIEKR+
Sbjct: 1 MSGDEAVAAP-VVPPVAEAAVIPEDMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRN 59
Query: 273 AQLCVLAEDCNQPDYVKLVKALCADHSINLLTVSSAKTLGEWAGLCKIDSEGNARKVVGC 452
AQLCVLAEDCNQPDYVKLVKALCADHSI LLTV SAKTLGEWAGLCKIDSEGNARKVVGC
Sbjct: 60 AQLCVLAEDCNQPDYVKLVKALCADHSIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGC 119
Query: 453 SCLVVKDYGEETTALNIVKKHIESN* 530
SCLV+KD+GEETTALNIVKKH++SN*
Sbjct: 120 SCLVIKDFGEETTALNIVKKHLDSN* 145
>TAIR9_protein||AT2G32060.3 | Symbols: | 40S ribosomal protein S12 (RPS12C) |
chr2:13639228-13640104 REVERSE
Length = 145
Score = 263 bits (672), Expect = 7e-071
Identities = 131/146 (89%), Positives = 140/146 (95%), Gaps = 1/146 (0%)
Frame = +3
Query: 93 MSGDEAAAAPTVVPPVAEAAVIPEDMDLLTALELTLRKARAHGGVVRGLHESAKLIEKRS 272
MSGDEA AAP VVPPVAEAAVIPEDMD+ TALELT+RK+RA+GGVVRGLHESAKLIEKR+
Sbjct: 1 MSGDEAVAAP-VVPPVAEAAVIPEDMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRN 59
Query: 273 AQLCVLAEDCNQPDYVKLVKALCADHSINLLTVSSAKTLGEWAGLCKIDSEGNARKVVGC 452
AQLCVLAEDCNQPDYVKLVKALCADHSI LLTV SAKTLGEWAGLCKIDSEGNARKVVGC
Sbjct: 60 AQLCVLAEDCNQPDYVKLVKALCADHSIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGC 119
Query: 453 SCLVVKDYGEETTALNIVKKHIESN* 530
SCLV+KD+GEETTALNIVKKH++SN*
Sbjct: 120 SCLVIKDFGEETTALNIVKKHLDSN* 145
>TAIR9_protein||AT2G32060.2 | Symbols: | 40S ribosomal protein S12 (RPS12C) |
chr2:13639228-13640104 REVERSE
Length = 145
Score = 263 bits (672), Expect = 7e-071
Identities = 131/146 (89%), Positives = 140/146 (95%), Gaps = 1/146 (0%)
Frame = +3
Query: 93 MSGDEAAAAPTVVPPVAEAAVIPEDMDLLTALELTLRKARAHGGVVRGLHESAKLIEKRS 272
MSGDEA AAP VVPPVAEAAVIPEDMD+ TALELT+RK+RA+GGVVRGLHESAKLIEKR+
Sbjct: 1 MSGDEAVAAP-VVPPVAEAAVIPEDMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRN 59
Query: 273 AQLCVLAEDCNQPDYVKLVKALCADHSINLLTVSSAKTLGEWAGLCKIDSEGNARKVVGC 452
AQLCVLAEDCNQPDYVKLVKALCADHSI LLTV SAKTLGEWAGLCKIDSEGNARKVVGC
Sbjct: 60 AQLCVLAEDCNQPDYVKLVKALCADHSIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGC 119
Query: 453 SCLVVKDYGEETTALNIVKKHIESN* 530
SCLV+KD+GEETTALNIVKKH++SN*
Sbjct: 120 SCLVIKDFGEETTALNIVKKHLDSN* 145
>TAIR9_protein||AT1G15930.2 | Symbols: | 40S ribosomal protein S12 (RPS12A) |
chr1:5471702-5472741 FORWARD
Length = 145
Score = 242 bits (615), Expect = 3e-064
Identities = 125/146 (85%), Positives = 130/146 (89%), Gaps = 3/146 (2%)
Frame = +3
Query: 96 SGDEAAAAPTVV-PPVAEAAVIPEDMDLLTALELTLRKARAHGGVVRGLHESAKLIEKRS 272
SGDE AAP VV PPVAE A IPEDMDL+TALELTLRKARA+GGVVRGLHE AKLIEKR
Sbjct: 2 SGDE--AAPVVVPPPVAEPAAIPEDMDLMTALELTLRKARAYGGVVRGLHECAKLIEKRV 59
Query: 273 AQLCVLAEDCNQPDYVKLVKALCADHSINLLTVSSAKTLGEWAGLCKIDSEGNARKVVGC 452
AQL VLAEDCNQPDYVKLVKALCADH + LLTV SAKTLGEWAGLCKIDSEGNARKVVGC
Sbjct: 60 AQLVVLAEDCNQPDYVKLVKALCADHEVRLLTVPSAKTLGEWAGLCKIDSEGNARKVVGC 119
Query: 453 SCLVVKDYGEETTALNIVKKHIESN* 530
SCLVVKD+GEETTAL+IV KHI S *
Sbjct: 120 SCLVVKDFGEETTALSIVNKHIASQ* 145
>TAIR9_protein||AT1G15930.1 | Symbols: | 40S ribosomal protein S12 (RPS12A) |
chr1:5471702-5472741 FORWARD
Length = 145
Score = 242 bits (615), Expect = 3e-064
Identities = 125/146 (85%), Positives = 130/146 (89%), Gaps = 3/146 (2%)
Frame = +3
Query: 96 SGDEAAAAPTVV-PPVAEAAVIPEDMDLLTALELTLRKARAHGGVVRGLHESAKLIEKRS 272
SGDE AAP VV PPVAE A IPEDMDL+TALELTLRKARA+GGVVRGLHE AKLIEKR
Sbjct: 2 SGDE--AAPVVVPPPVAEPAAIPEDMDLMTALELTLRKARAYGGVVRGLHECAKLIEKRV 59
Query: 273 AQLCVLAEDCNQPDYVKLVKALCADHSINLLTVSSAKTLGEWAGLCKIDSEGNARKVVGC 452
AQL VLAEDCNQPDYVKLVKALCADH + LLTV SAKTLGEWAGLCKIDSEGNARKVVGC
Sbjct: 60 AQLVVLAEDCNQPDYVKLVKALCADHEVRLLTVPSAKTLGEWAGLCKIDSEGNARKVVGC 119
Query: 453 SCLVVKDYGEETTALNIVKKHIESN* 530
SCLVVKD+GEETTAL+IV KHI S *
Sbjct: 120 SCLVVKDFGEETTALSIVNKHIASQ* 145
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,934,039,932
Number of Sequences: 33410
Number of Extensions: 1934039932
Number of Successful Extensions: 69361996
Number of sequences better than 0.0: 0
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