BLASTX 7.6.2
Query= UN02550 /QuerySize=1274
(1273 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G47730.1 | Symbols: | F-box family protein | ... 134 2e-031
TAIR9_protein||AT1G50870.1 | Symbols: | F-box family protein | ... 128 8e-030
TAIR9_protein||AT1G47790.1 | Symbols: | F-box family protein | ... 121 1e-027
TAIR9_protein||AT3G10240.1 | Symbols: | F-box protein-related |... 112 8e-025
TAIR9_protein||AT3G06280.1 | Symbols: | FUNCTIONS IN: molecular... 106 3e-023
TAIR9_protein||AT4G09190.1 | Symbols: | F-box family protein | ... 90 3e-018
TAIR9_protein||AT5G65850.1 | Symbols: | F-box family protein | ... 82 5e-016
TAIR9_protein||AT1G48060.1 | Symbols: | F-box family protein | ... 81 1e-015
TAIR9_protein||AT1G46840.1 | Symbols: | F-box family protein | ... 74 2e-013
TAIR9_protein||AT5G18160.1 | Symbols: | F-box family protein | ... 71 1e-012
TAIR9_protein||AT1G30920.1 | Symbols: | F-box family protein | ... 68 1e-011
TAIR9_protein||AT1G47300.1 | Symbols: | F-box family protein | ... 67 2e-011
TAIR9_protein||AT2G31470.1 | Symbols: | F-box family protein | ... 66 5e-011
TAIR9_protein||AT1G47765.1 | Symbols: | F-box family protein | ... 65 1e-010
TAIR9_protein||AT1G59690.1 | Symbols: | FUNCTIONS IN: molecular... 62 9e-010
TAIR9_protein||AT1G53550.1 | Symbols: | F-box family protein | ... 57 3e-008
TAIR9_protein||AT1G53370.1 | Symbols: | F-box family protein | ... 55 7e-008
TAIR9_protein||AT2G23160.1 | Symbols: | FUNCTIONS IN: molecular... 55 1e-007
>TAIR9_protein||AT1G47730.1 | Symbols: | F-box family protein |
chr1:17563931-17565106 REVERSE
Length = 392
Score = 134 bits (335), Expect = 2e-031
Identities = 78/216 (36%), Positives = 117/216 (54%), Gaps = 23/216 (10%)
Frame = -2
Query: 699 RALTLGGDGAGRWRVIEGVPEHALFPF-------GALCVNGVLYYLAAPTTPEHYTNQSL 541
R LTLG D WR ++ +++ F F + C+NGV+YY A + + + +
Sbjct: 188 RVLTLGSD--QEWRTVKTNHKNSPFTFHGGVCYRQSRCINGVIYYRA-----DTNSGRVI 240
Query: 540 ACFHVRSEKLSMIKVPWNLTSGFRSLVHCWGKLTCVVSLG-----DDLNMWTLEHAEKHE 376
F VRSE+ +I++PW+ G ++ G+L C LG + +MW LE+ E+ E
Sbjct: 241 LSFDVRSERFDVIELPWDENFGLVMMMSYKGRLAC---LGFNHEKNSRSMWVLENVEQRE 297
Query: 375 WSHRHVCLPFPRHDPVSKTRFTFRGVNGAGEFMYVPLALANPFHIIYFDPKGNSFRRSVV 196
WS H LP ++P + F G+ GE +YVP + FH+IYFD +FRR +
Sbjct: 298 WS-CHTYLPISHYEPGLENYFNLTGITNDGELIYVPNTVLERFHVIYFDAIRETFRRVIY 356
Query: 195 DGVADEQFRRQNGLGDKPLPIASAYSNHVETLMTL* 88
GVAD+ FR +NGL DKP+ + NH+ETLM+L*
Sbjct: 357 KGVADKGFRLRNGLEDKPIRRLHFFPNHIETLMSL* 392
Score = 121 bits (301), Expect = 2e-027
Identities = 70/167 (41%), Positives = 98/167 (58%), Gaps = 7/167 (4%)
Frame = -1
Query: 1255 QDLEMKRGSKRSKGASLHVDLIWEVLLRLPSKSIVQSRCVSKLLSSITTVPDFIRSLAAR 1076
++++ KR +S +SL +DL E+ RLP+KS+V+ RCVSKL SSITT P F S R
Sbjct: 9 ENIQRKRSRGKSSSSSLPLDLTSEIFSRLPAKSVVRFRCVSKLWSSITTAPYFTNSFETR 68
Query: 1075 SYQTPCLLILLEVESKMFVFSLPQQQEHNSNNNNNNPVAVVDRNYSMPRPDRYCFFS-SE 899
P L+ + K FVF++PQ ++ + + + + ++D +Y P R C + +E
Sbjct: 69 ----PNLMFFFKEGDKFFVFTIPQHNQNPNESYSYSSSEIID-SYHTTYPKRCCVTTLTE 123
Query: 898 SVHGLICVEKLGHPQIWNPTTRRFSTLPIPARSWKDGSVSFLGYDPV 758
SVHGLIC K P IWNPT R+F L WK+ VS LGYDPV
Sbjct: 124 SVHGLICFRKAATPIIWNPTMRKFKPLRKLDERWKNIKVS-LGYDPV 169
>TAIR9_protein||AT1G50870.1 | Symbols: | F-box family protein |
chr1:18855147-18856337 FORWARD
Length = 397
Score = 128 bits (321), Expect = 8e-030
Identities = 78/202 (38%), Positives = 108/202 (53%), Gaps = 8/202 (3%)
Frame = -2
Query: 699 RALTLGGDGAGRWRVIEGVPEH-ALFPFGALCVNGVLYYLAAPTTPEHYTNQSLACFHVR 523
R LTL G +WR I+ +H ++ + C+NGV+YY A +N ++ F VR
Sbjct: 195 RVLTL-GSAQEKWRRIKSNLKHRSILRYYGQCINGVIYYQAYIDQMGFISNPTIMSFEVR 253
Query: 522 SEKLSMIKVPWNLTSGFRSLVHCWGKLTCVVSLGDDLN----MWTLEHAEKHEWSHRHVC 355
SEK I +P S L+ G+L CV + DD+N +WTLE AEKH WS +
Sbjct: 254 SEKFDTITLPSG--SFANMLIPYQGRLACVNNTMDDVNGGITLWTLEDAEKHIWSCKLFL 311
Query: 354 LPFPRHDPVSKTRFTFRGVNGAGEFMYVPLALANPFHIIYFDPKGNSFRRSVVDGVADEQ 175
P +D KT F G+ AGEF+YV F+++YFDPK NSFR+ G A E
Sbjct: 312 APLAHYDRSLKTDFKLDGITHAGEFIYVLSTFLKSFYVLYFDPKKNSFRKVEFRGTAYEV 371
Query: 174 FRRQNGLGDKPLPIASAYSNHV 109
FR +GLG+K + +S+HV
Sbjct: 372 FRLSHGLGNKKVNRLYTFSHHV 393
Score = 123 bits (308), Expect = 3e-028
Identities = 71/148 (47%), Positives = 89/148 (60%), Gaps = 4/148 (2%)
Frame = -1
Query: 1201 VDLIWEVLLRLPSKSIVQSRCVSKLLSSITTVPDFIRSLAARSYQTPCLLILLEVESKMF 1022
+DLI E+LLRLP KS+++ RCVSKL S TT P F S ARS P LL+ + + K+F
Sbjct: 33 LDLILEILLRLPVKSVLRFRCVSKLWLSTTTDPYFTNSYEARSSTRPSLLMFFKNKDKLF 92
Query: 1021 VFSLPQQQEHNSNNNNNNPVAVVDRNYSMPRPDRYCFFSSESVHGLICVEKLGHPQIWNP 842
VF+ P HN N+ + + +Y + P CF +ESVHGLI P IWNP
Sbjct: 93 VFTFP---HHNQNSKETHSYSQHVDSYHIKYPKYCCFPFTESVHGLISFRISTKPIIWNP 149
Query: 841 TTRRFSTLPIPARSWKDGSVSFLGYDPV 758
T R+F LP P +SWK SV FLGYDPV
Sbjct: 150 TMRQFLILPKPEKSWKGLSV-FLGYDPV 176
>TAIR9_protein||AT1G47790.1 | Symbols: | F-box family protein |
chr1:17600004-17601173 REVERSE
Length = 390
Score = 121 bits (303), Expect = 1e-027
Identities = 73/174 (41%), Positives = 110/174 (63%), Gaps = 12/174 (6%)
Frame = -1
Query: 1261 EQQDLEMKRGSKRSK-----GASLHVDLIWEVLLRLPSKSIVQSRCVSKLLSSITTVPDF 1097
EQQ+ + ++ +R + +S +DL E+LLRLP KS+V+ RCVSKL SSI T P F
Sbjct: 2 EQQEKKKRKVYRRRRLQSKPTSSFPLDLASEILLRLPVKSVVRFRCVSKLWSSIITDPYF 61
Query: 1096 IRSLAARSYQTPCLLILLEVESKMFVFSLPQQQEHNSNNNNNNPVAVVDRNYSMPRPDRY 917
I++ +S LL + K+FVFS+P +H+ ++N+++ A +DR + + P +
Sbjct: 62 IKTYETQSSTRQSLLFCFKQSDKLFVFSIP---KHHYDSNSSSQ-AAIDR-FQVKLPQEF 116
Query: 916 CFFS-SESVHGLICVEKLGHPQIWNPTTRRFSTLPIPARSWKDGSVSFLGYDPV 758
+ S +ESVHGLIC L +WNP+ R+F TLP P +SWK+ +V FLGYDP+
Sbjct: 117 SYPSPTESVHGLICFHVLATVIVWNPSMRQFLTLPKPRKSWKELTV-FLGYDPI 169
>TAIR9_protein||AT3G10240.1 | Symbols: | F-box protein-related |
chr3:3166698-3167867 FORWARD
Length = 390
Score = 112 bits (278), Expect = 8e-025
Identities = 70/164 (42%), Positives = 100/164 (60%), Gaps = 7/164 (4%)
Frame = -1
Query: 1240 KRGSKRSK--GASLHVDLIWEVLLRLPSKSIVQSRCVSKLLSSITTVPDFIRSLAARSYQ 1067
+R SKRSK +S+ +DL+ E+LLRLP KS+ + RCVSK SSITT P FI L RS
Sbjct: 14 QRKSKRSKSGSSSIPLDLVSEILLRLPEKSVARFRCVSKPWSSITTEPYFINLLTTRS-- 71
Query: 1066 TPCLLILLEVESKMFVFSLPQ-QQEHNSNNNNNNPVAVVDRNYSMPRPDRYCFFSSESVH 890
P LL+ + K FV S+PQ +Q + N +++ ++DR + + F +ESV+
Sbjct: 72 -PRLLLCFKANEKFFVSSIPQHRQTFETWNKSHSYSQLIDRYHMEFSEEMNYFPPTESVN 130
Query: 889 GLICVEKLGHPQIWNPTTRRFSTLPIPARSWKDGSVSFLGYDPV 758
GLIC ++ +WNP+TR+ LP P + D ++ FLGYDPV
Sbjct: 131 GLICFQESARLIVWNPSTRQLLILPKPNGNSNDLTI-FLGYDPV 173
>TAIR9_protein||AT3G06280.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: sperm cell, hypocotyl, seed,
leaf; EXPRESSED DURING: LP.04 four leaves visible, F mature embryo
stage; CONTAINS InterPro DOMAIN/s: F-box associated type 3
(InterPro:IPR013187); BEST Arabidopsis thaliana protein match is: F-box
family protein (TAIR:AT1G47730.1); Has 223 Blast hits to 219 proteins
in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants
- 223; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr3:1898155-1898751 REVERSE
Length = 199
Score = 106 bits (264), Expect = 3e-023
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 3/106 (2%)
Frame = -2
Query: 414 LNMWTLEHAEKHEWSHRHVCLPFPRHDPVSKTRFTFRGVNGAGEFMYVPLALANPFHIIY 235
+++W LE AE+H WS R L FP DP+ T GV AGEF+Y P L +PFH +Y
Sbjct: 94 ISLWVLEDAERHAWSFRTFSLTFPLDDPILDTFLELTGVTEAGEFVYAPTTLQSPFHALY 153
Query: 234 FDPKGNSFRRSVVDGVADEQFRRQNGLGDKPLPIASAYSNHVETLM 97
FDP+ NSFRR + +G+AD++FRR+N LG + I NH+E+L+
Sbjct: 154 FDPQRNSFRRVIYEGLADDEFRRRNRLGYERHHI---LPNHIESLI 196
>TAIR9_protein||AT4G09190.1 | Symbols: | F-box family protein |
chr4:5855176-5856327 FORWARD
Length = 384
Score = 90 bits (221), Expect = 3e-018
Identities = 62/169 (36%), Positives = 89/169 (52%), Gaps = 11/169 (6%)
Frame = -1
Query: 1258 QQDLEMKRGSKRSKGASLHVDLIWEVLLRLPSKSIVQSRCVSKLLSSITTVPDFIRSLAA 1079
Q+ + + RS+ + +DLI E++ LP+KSIV+ R VSKL SSI T PDF S+
Sbjct: 5 QRITQFSDDNNRSQREHIPLDLIVEIVSSLPAKSIVRFRSVSKLWSSIITTPDFTSSVVT 64
Query: 1078 RSYQT-PCLLILLEVESKMFVFSLPQQQEHNSNNNNNNPVAVVDRNYSMPRPDRYCFFSS 902
RS + PC+L++ + K+F F+ P Q+ N V + Y++P +
Sbjct: 65 RSLSSRPCVLLIFQKHDKLFFFASPVHQKKTCPN-------VENFQYTIPNNGK--LQRC 115
Query: 901 ESVHGLICVEKLGHPQ-IWNPTTRRFSTLPIPARSWKDGSVSFLGYDPV 758
ESVHGLI +E + I NP T+ F TLP FLGYDP+
Sbjct: 116 ESVHGLIYLETSTNVMFIRNPITKSFFTLPKLDSKEGRPLTGFLGYDPI 164
>TAIR9_protein||AT5G65850.1 | Symbols: | F-box family protein |
chr5:26346317-26347495 FORWARD
Length = 393
Score = 82 bits (202), Expect = 5e-016
Identities = 57/162 (35%), Positives = 81/162 (50%), Gaps = 16/162 (9%)
Frame = -1
Query: 1231 SKRSKGASLHVDLIWEVLLRLPSKSIVQSRCVSKLLSSITTVPDFIRSLAARSYQTPCLL 1052
+K K + VD+I E+LLRLP+KSI RCVSKL S+ DF RS P LL
Sbjct: 27 NKTEKSVQIPVDIIIEILLRLPAKSIATCRCVSKLWISVICRQDFTELFLTRSLHRPQLL 86
Query: 1051 ILLEVESKMFVFSLPQQQEHNSNNNNNNPVAVVDRNYSMPRPDRYCFFSSESVHGLICVE 872
+ + +F FS PQ Q N N A+ +N+S+ C+ S V+GLIC +
Sbjct: 87 FCCKKDGNLFFFSSPQLQ-----NPYENSSAISLKNFSL------CYKISRPVNGLICFK 135
Query: 871 KLGHPQ----IWNPTTRRFSTLPIPARSWKDGSVSFLGYDPV 758
+ + I NP+T +LP P ++ G F Y+P+
Sbjct: 136 RKEMNETVTVICNPSTGHTLSLPKPMKT-SIGPSRFFVYEPI 176
>TAIR9_protein||AT1G48060.1 | Symbols: | F-box family protein |
chr1:17728295-17729448 FORWARD
Length = 354
Score = 81 bits (198), Expect = 1e-015
Identities = 46/112 (41%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Frame = -2
Query: 420 DDLNMWTLEHAEKHEWSHRHVCLPFPRHDPVSKTRFTFRGVNGAGEFMYVPLALANPFHI 241
+ L MW LE +K EWS + LP +D + F G+ GE +YVP + F +
Sbjct: 244 NSLPMWVLEGEKKGEWS-TYNFLPLSHYDRRLEFHFKLIGITNDGELIYVPNTVFKTFEV 302
Query: 240 IYFDPKGNSFRRSVVDGVADEQFRRQNGLG-DKPLPIASAYSNHVETLMTL* 88
IY DP +F +GVAD+ FR++NGLG DKPL NHVETL++L*
Sbjct: 303 IYIDPIRKTFSLVKYEGVADKGFRQRNGLGEDKPLRGIQYSPNHVETLLSL* 354
>TAIR9_protein||AT1G46840.1 | Symbols: | F-box family protein |
chr1:17270185-17271706 FORWARD
Length = 476
Score = 74 bits (179), Expect = 2e-013
Identities = 52/155 (33%), Positives = 72/155 (46%), Gaps = 13/155 (8%)
Frame = -1
Query: 1207 LHVDLIWEVLLRLPSKSIVQSRCVSKLLSSITTVPDFIRSLAARSYQTPCLLILLEVESK 1028
LH+DL+ E+L RL +KSI RCVSK +S+ DF+ S S P + + K
Sbjct: 31 LHIDLVIEILSRLSAKSIAICRCVSKQWNSLLVSQDFVESFLRSSLSRPRIWFTFRFDGK 90
Query: 1027 MFVFSLPQQQEHNSNNNNNNPVAVVDRNYSMPRPDRYCFFSSESVHGLICVEKLGHPQ-- 854
FS PQ Q+ +N ++V + M + + S +SVHG I +
Sbjct: 91 WNFFSSPQPQKFGNN------LSVEATEHHMGSYENWYMKSCQSVHGFIFMSYNSKGMTD 144
Query: 853 ----IWNPTTRRFSTLPIPARSWKDGSVSFLGYDP 761
IWNP TR+ TLP D + SF YDP
Sbjct: 145 RTQVIWNPCTRQLITLPKLEPENLDFN-SFFAYDP 178
>TAIR9_protein||AT5G18160.1 | Symbols: | F-box family protein |
chr5:6002770-6003909 FORWARD
Length = 380
Score = 71 bits (173), Expect = 1e-012
Identities = 38/84 (45%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = -1
Query: 1234 GSKRSKGASLHVDLIWEVLLRLPSKSIVQSRCVSKLLSSITTVPDFIRSLAARSYQTPCL 1055
G+ S+ S+ +D+ E+L RLP+KSIV+SR VSKL SSITT P+FI+ + ++ PC+
Sbjct: 25 GNHISQSNSIPLDITIEILSRLPAKSIVRSRSVSKLWSSITTTPEFIKHRSKKT-SPPCV 83
Query: 1054 LILLEVESKMFVFSLPQQQEHNSN 983
L++ K+ VFS PQ Q S+
Sbjct: 84 LLIFRKHDKLIVFSSPQHQNTYSH 107
>TAIR9_protein||AT1G30920.1 | Symbols: | F-box family protein |
chr1:11004242-11005444 REVERSE
Length = 401
Score = 68 bits (165), Expect = 1e-011
Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 10/159 (6%)
Frame = -1
Query: 1210 SLHVDLIWEVLLRLPSKSIVQSRCVSKLLSSITTVPDFIRSLAARSYQTPCLLILLEVES 1031
S+ +DLI ++L RLPSKSI + RCVSKL S+ F RS P LLI +E E
Sbjct: 9 SIPIDLILDILSRLPSKSIARCRCVSKLWESMIRQSYFTELFLTRSSSRPHLLIAVEQEG 68
Query: 1030 KMFVFSLPQQQEHNSNNNNNNPVAVVDRNYSMPRPDRYCFFSSESVH-GLICVEKLGHPQ 854
+ FSLPQ + + ++ + + + RP C ++S ++ + + K G
Sbjct: 69 EWKFFSLPQPKNYLGKSSLVVAANLHLKFFEDKRPQHGCSYASSLIYFPNMTIRKKGDDH 128
Query: 853 ---IWNPTTRRFSTLPIPA----RSWKDGSVSFLGYDPV 758
I NP+T ++ + +P +S G FLG+DP+
Sbjct: 129 LGVICNPSTGQYGYVILPPLLDFKSVPYG--KFLGFDPI 165
>TAIR9_protein||AT1G47300.1 | Symbols: | F-box family protein |
chr1:17339561-17340972 REVERSE
Length = 307
Score = 67 bits (163), Expect = 2e-011
Identities = 52/162 (32%), Positives = 79/162 (48%), Gaps = 16/162 (9%)
Frame = -1
Query: 1210 SLHVDLIWEVLLRLPSKSIVQSRCVSKLLSSITTVPDFIRSLAARSYQTPCLLILLEVES 1031
S+ +LI E++LRLP+KSI + CVSK +S+ + P F S P LL ++
Sbjct: 5 SIPKELILEIMLRLPAKSIARFHCVSKQWASMLSRPYFTELFLTSSSTQPRLLFAIKRNG 64
Query: 1030 KMFVFSLPQQQEHNSNNNNNNPVAVVDRNYSMP-RPDRYCFFSSESVHGLICVEKLGHPQ 854
FSLP +H S +N++ VV ++ M P++ +SS L C G
Sbjct: 65 LWCFFSLP---KHQSPYDNSSSSLVVAADFHMKFLPNKIQMYSSSENRKLSCCYASGLTY 121
Query: 853 ----------IWNPTTRRFSTLPIPARSWKDGSVSFLGYDPV 758
I NP T R+++LP R K+ +SF G+DP+
Sbjct: 122 FYDMYSEVRVICNPITGRYASLPYLKRYRKE--LSFFGFDPI 161
>TAIR9_protein||AT2G31470.1 | Symbols: | F-box family protein |
chr2:13407492-13408655 REVERSE
Length = 388
Score = 66 bits (159), Expect = 5e-011
Identities = 52/158 (32%), Positives = 77/158 (48%), Gaps = 16/158 (10%)
Frame = -1
Query: 1201 VDLIWEVLLRLPSKSIVQSRCVSKLLSSITTVPDFIRSLAARSYQTPCLLILLEVESKMF 1022
+DL+ E+ R P KSI + RCVSKL +SI +P F +S P LL + ++F
Sbjct: 27 IDLVIEIFSRSPVKSIARCRCVSKLWASILRLPYFTELYLTKSCARPRLLFACQKHRELF 86
Query: 1021 VFSLPQQQEHNSNNNNNNPVAVVDRNYSMPRPDRYCFFSSESVHGLICV--EKLGHPQ-- 854
FS P Q HN N +++P+A ++ M P F + GL+ V E++ +
Sbjct: 87 FFSTP--QPHNP-NESSSPLAA---SFHMKIPFDGRFNIISPIGGLVFVRYEQILKGRKT 140
Query: 853 ------IWNPTTRRFSTLPIPARSWKDGSVSFLGYDPV 758
I NP+T + TLP P + S GYDP+
Sbjct: 141 PEFVSAICNPSTGQSLTLPKPKTRKRIWGTSHFGYDPI 178
>TAIR9_protein||AT1G47765.1 | Symbols: | F-box family protein |
chr1:17574906-17576092 REVERSE
Length = 386
Score = 65 bits (156), Expect = 1e-010
Identities = 39/100 (39%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Frame = -1
Query: 1270 KMGEQQDLEMKRGSKRSKGASLHVDLIWEVLLRLPSKSIVQSRCVSKLLSSITTVPDFIR 1091
K +++ + + ++ +SL +DL E+LLRLP KSI + RCVSKL SITT P FI
Sbjct: 5 KQKKRKVVSKSKRTQSKSASSLPLDLTSEILLRLPEKSIARFRCVSKLWLSITTDPYFIN 64
Query: 1090 SLAARSYQTPCLLILLEVESKMFVFSLPQQQEHNSNNNNN 971
RS P LL+ K+FV S+PQ N+ +
Sbjct: 65 LFETRS-PRPSLLVCFIENDKLFVSSIPQHLHSLQNSKRS 103
>TAIR9_protein||AT1G59690.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: F-box
associated type 3 (InterPro:IPR013187); BEST Arabidopsis thaliana
protein match is: F-box family protein-related (TAIR:AT4G13060.1); Has
84 Blast hits to 84 proteins in 1 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr1:21935310-21935820 REVERSE
Length = 144
Score = 62 bits (148), Expect = 9e-010
Identities = 28/83 (33%), Positives = 48/83 (57%)
Frame = -2
Query: 336 DPVSKTRFTFRGVNGAGEFMYVPLALANPFHIIYFDPKGNSFRRSVVDGVADEQFRRQNG 157
D + K + +F GV+ AGE ++ P L F+++YFDP+ NS R V+G+ ++FR + G
Sbjct: 62 DLIRKEKPSFYGVSDAGEIVFAPSILFESFYLLYFDPRRNSIREVSVEGIVGDEFRSRYG 121
Query: 156 LGDKPLPIASAYSNHVETLMTL* 88
+ Y NH+++L+ L*
Sbjct: 122 FVKDYMYNMKVYPNHIKSLVFL* 144
>TAIR9_protein||AT1G53550.1 | Symbols: | F-box family protein |
chr1:19983411-19984637 FORWARD
Length = 409
Score = 57 bits (135), Expect = 3e-008
Identities = 47/154 (30%), Positives = 68/154 (44%), Gaps = 10/154 (6%)
Frame = -1
Query: 1201 VDLIWEVLLRLPSKSIVQSRCVSKLLSSITTVPDFIRSLAARSYQTPCLLILLEVESKMF 1022
VDL+ +L RL + I + RCVSKL SSI P++ + +S TP LL + +V ++F
Sbjct: 37 VDLVINILSRLSLECIARCRCVSKLWSSIIRRPNYNQLFPVKSSATPRLLFVFKVARELF 96
Query: 1021 VFSLPQQQEHNSNNNNNNPVAVVDRNYSMPRPDRYCFFSSESVHGLICVEKLGHPQIWNP 842
S PQ + N NN++ VA + S R + C + E I NP
Sbjct: 97 FNSSPQ----HFNPNNSSLVATSLQKTSSTRFSQLCRPVHGLICSQHIEENYLFALISNP 152
Query: 841 TTRRFSTLPIPARSWKDGSVSF------LGYDPV 758
TT + LP + GYDP+
Sbjct: 153 TTGEYIALPKQRMEEMNSETIIEKVRYSFGYDPI 186
>TAIR9_protein||AT1G53370.1 | Symbols: | F-box family protein |
chr1:19910516-19911646 FORWARD
Length = 356
Score = 55 bits (132), Expect = 7e-008
Identities = 31/78 (39%), Positives = 44/78 (56%)
Frame = -1
Query: 1210 SLHVDLIWEVLLRLPSKSIVQSRCVSKLLSSITTVPDFIRSLAARSYQTPCLLILLEVES 1031
S+ VDL+ ++L R P KSI + CVSKL SI PDF +S L L+V +
Sbjct: 27 SIPVDLLIDILSRFPPKSIARFYCVSKLWESILRGPDFTELYLTKSVALRRLFFALKVNT 86
Query: 1030 KMFVFSLPQQQEHNSNNN 977
++ VFS PQ Q + N++
Sbjct: 87 ELLVFSSPQPQIPDENSS 104
>TAIR9_protein||AT2G23160.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; CONTAINS InterPro DOMAIN/s: Cyclin-like F-box
(InterPro:IPR001810), F-box associated type 3 (InterPro:IPR013187),
F-box associated type 1 (InterPro:IPR017451); BEST Arabidopsis thaliana
protein match is: F-box family protein (TAIR:AT2G16450.1); Has 750
Blast hits to 732 proteins in 29 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 750; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr2:9862470-9863393 FORWARD
Length = 308
Score = 55 bits (130), Expect = 1e-007
Identities = 29/81 (35%), Positives = 43/81 (53%)
Frame = -1
Query: 1222 SKGASLHVDLIWEVLLRLPSKSIVQSRCVSKLLSSITTVPDFIRSLAARSYQTPCLLILL 1043
+ + + +DLI E+L R+PSKS+ + RCVSK +S+ P F RS PC+L
Sbjct: 2 NSSSPISIDLIAEILSRVPSKSVARFRCVSKPWASMIRRPYFTELFLTRSSPKPCILFAT 61
Query: 1042 EVESKMFVFSLPQQQEHNSNN 980
+ FSLPQ S++
Sbjct: 62 VADGVWSFFSLPQYPYEKSSS 82
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,019,842,285
Number of Sequences: 33410
Number of Extensions: 2019842285
Number of Successful Extensions: 69397210
Number of sequences better than 0.0: 0
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